PDB: 45385 件ウェブページステータス検索Chemie searchBIRD

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4FLG	HIV-1 protease mutant I47V complexed with reaction intermediate 分子名称: CHLORIDE ION, GLUTAMIC ACID, GLYCEROL, ... 著者 Yu, X, Shen, C.H, Weber, I.T. 登録日 2012-06-14 公開日 2012-10-17 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.31 Å) 主引用文献 Capturing the Reaction Pathway in Near-Atomic-Resolution Crystal Structures of HIV-1 Protease. Biochemistry, 51, 2012
2ZGB	Thrombin Inhibition 分子名称: D-leucyl-N-(3-chlorobenzyl)-L-prolinamide, Hirudin variant-1, SODIUM ION, ... 著者 Baum, B, Heine, A, Klebe, G. 登録日 2008-01-21 公開日 2008-12-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Non-additivity of functional group contributions in protein-ligand binding: a comprehensive study by crystallography and isothermal titration calorimetry. J.Mol.Biol., 397, 2010
2ZHQ	Thrombin Inhibition 分子名称: Hirudin variant-1, N-(4-carbamimidoylbenzyl)-1-(3-phenylpropanoyl)-L-prolinamide, SODIUM ION, ... 著者 Baum, B, Heine, A, Klebe, G. 登録日 2008-02-08 公開日 2009-01-13 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Non-additivity of functional group contributions in protein-ligand binding: a comprehensive study by crystallography and isothermal titration calorimetry. J.Mol.Biol., 397, 2010
2ZI2	Thrombin Inhibition 分子名称: 1-butanoyl-N-(4-carbamimidoylbenzyl)-L-prolinamide, BENZAMIDINE, Hirudin variant-1, ... 著者 Baum, B, Heine, A, Klebe, G. 登録日 2008-02-13 公開日 2009-01-13 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Non-additivity of functional group contributions in protein-ligand binding: a comprehensive study by crystallography and isothermal titration calorimetry. J.Mol.Biol., 397, 2010
2ZC9	Thrombin in complex with Inhibitor 分子名称: D-phenylalanyl-N-(3-chlorobenzyl)-L-prolinamide, Hirudin variant-1, SODIUM ION, ... 著者 Baum, B, Heine, A, Klebe, G. 登録日 2007-11-06 公開日 2008-10-28 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Think twice: understanding the high potency of bis(phenyl)methane inhibitors of thrombin J.Mol.Biol., 391, 2009
4FF7	Structure of C126S mutant of Saccharomyces cerevisiae triosephosphate isomerase 分子名称: 2-PHOSPHOGLYCOLIC ACID, GLYCEROL, PHOSPHATE ION, ... 著者 Rodriguez-Romero, A, Hernandez-Santoyo, A. 登録日 2012-05-31 公開日 2012-08-22 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Effects of a buried cysteine-to-serine mutation on yeast triosephosphate isomerase structure and stability. Int J Mol Sci, 13, 2012
3K7F	Crystal Structure Analysis of a Phenhexyl/Oxazole/Carboxypyridine alpha-Ketoheterocycle Inhibitor Bound to a Humanized Variant of Fatty Acid Amide Hydrolase' 分子名称: 6-[2-(7-phenylheptanoyl)-1,3-oxazol-5-yl]pyridine-2-carboxylic acid, CHLORIDE ION, Fatty-acid amide hydrolase 1, ... 著者 Mileni, M, Stevens, R.C, Boger, D.L. 登録日 2009-10-13 公開日 2009-12-01 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 X-ray crystallographic analysis of alpha-ketoheterocycle inhibitors bound to a humanized variant of fatty acid amide hydrolase. J.Med.Chem., 53, 2010
4GT6	Crystal structure of a leucine rich cell surface protein (FAEPRAA2165_01021) from Faecalibacterium prausnitzii A2-165 at 1.80 A resolution 分子名称: 1,2-ETHANEDIOL, Cell surface protein, SODIUM ION 著者 Joint Center for Structural Genomics (JCSG) 登録日 2012-08-28 公開日 2012-09-26 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of a leucine rich cell surface protein (FAEPRAA2165_01021) from Faecalibacterium prausnitzii A2-165 at 1.80 A resolution (CASP Target) To be Published
4HA4	Structure of beta-glycosidase from Acidilobus saccharovorans in complex with glycerol 分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Beta-galactosidase, GLYCEROL, ... 著者 Trofimov, A.A, Polyakov, K.M, Tikhonov, A.V, Bezsudnova, E.Y, Dorovatovskii, P.V, Gumerov, V.M, Ravin, N.V, Skryabin, K.G, Popov, V.O. 登録日 2012-09-25 公開日 2012-10-10 最終更新日 2013-09-04 実験手法 X-RAY DIFFRACTION (1.37 Å) 主引用文献 Structures of beta-glycosidase from Acidilobus saccharovorans in complexes with tris and glycerol. Dokl.Biochem.Biophys., 449
4IJK	Crystal structure of a putative 3-oxoacyl-[acyl-carrier protein]reductase from Helicobacter pylori 26695 分子名称: 3-ketoacyl-acyl carrier protein reductase (FabG), SODIUM ION 著者 Hou, J, Osinski, T, Zheng, H, Shumilin, I, Shabalin, I.G, Shatsman, S, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2012-12-21 公開日 2013-01-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.54 Å) 主引用文献 Crystal structure of a putative 3-oxoacyl-[acyl-carrier protein]reductase from Helicobacter pylori 26695 To be Published
3C52	Class II fructose-1,6-bisphosphate aldolase from helicobacter pylori in complex with phosphoglycolohydroxamic acid, a competitive inhibitor 分子名称: CALCIUM ION, Fructose-bisphosphate aldolase, PHOSPHOGLYCOLOHYDROXAMIC ACID, ... 著者 Coincon, M, Sygusch, J. 登録日 2008-01-30 公開日 2008-08-26 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Synthesis and Biochemical Evaluation of Selective Inhibitors of Class II Fructose Bisphosphate Aldolases: Towards New Synthetic Antibiotics. Chemistry, 14, 2008
4IMZ	Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus 分子名称: Genome polyprotein, SODIUM ION, THIOCYANATE ION, ... 著者 Prasad, B.V.V, Muhaxhiri, Z, Deng, L, Shanker, S, Sankaran, B, Estes, M.K, Palzkill, T, Song, Y. 登録日 2013-01-03 公開日 2013-02-20 最終更新日 2013-04-10 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural basis of substrate specificity and protease inhibition in norwalk virus. J.Virol., 87, 2013
4FLJ	Human MetAP1 with bengamide analog Y08, in Mn form 分子名称: (E,2R,3R,4S,5R)-N-[[(3S)-1-cyclopropylcarbonylpiperidin-3-yl]methyl]-2-methoxy-8,8-dimethyl-3,4,5-tris(oxidanyl)non-6-enamide, MANGANESE (II) ION, Methionine aminopeptidase 1, ... 著者 Ye, Q.Z, Xu, W. 登録日 2012-06-14 公開日 2012-09-19 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Structural analysis of bengamide derivatives as inhibitors of methionine aminopeptidases. J.Med.Chem., 55, 2012
4FM6	HIV-1 protease mutant V32I complexed with reaction intermediate 分子名称: CHLORIDE ION, GLYCEROL, HIV-1 protease, ... 著者 Shen, C.H, Weber, I.T. 登録日 2012-06-15 公開日 2012-10-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Capturing the Reaction Pathway in Near-Atomic-Resolution Crystal Structures of HIV-1 Protease. Biochemistry, 51, 2012
3HZO	Rv0554 from Mycobacterium tuberculosis - the structure solved from the tetragonal crystal form 分子名称: 1,2-ETHANEDIOL, MALONIC ACID, SODIUM ION, ... 著者 Johnston, J.M, Baker, E.N. 登録日 2009-06-23 公開日 2010-06-02 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The structure of Rv0554 from Mycobacterium tuberculosis To be Published
4GPJ	Crystal Structure of the first bromodomain of human BRD4 in complex with a isoxazolylbenzimidazole ligand 分子名称: (1R)-6-(3,5-dimethyl-1,2-oxazol-4-yl)-1-phenyl-2,3-dihydro-1H-inden-1-ol, 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ... 著者 Filippakopoulos, P, Picaud, S, Qi, J, Felletar, I, Heightman, T.D, Brennan, P, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2012-08-21 公開日 2012-10-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The design and synthesis of 5- and 6-isoxazolylbenzimidazoles as selective inhibitors of the BET bromodomains. Medchemcomm, 4, 2013
3K5I	Crystal structure of N5-carboxyaminoimidazole synthase from aspergillus clavatus in complex with ADP and 5-aminoimadazole ribonucleotide 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 5-AMINOIMIDAZOLE RIBONUCLEOTIDE, ADENOSINE-5'-DIPHOSPHATE, ... 著者 Thoden, J.B, Holden, H.M, Paritala, H, Firestine, S.M. 登録日 2009-10-07 公開日 2009-10-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and functional studies of Aspergillus clavatus N(5)-carboxyaminoimidazole ribonucleotide synthetase Biochemistry, 49, 2010
1RS0	Crystal Structure Analysis of the Bb segment of Factor B complexed with Di-isopropyl-phosphate (DIP) 分子名称: Complement factor B, DIISOPROPYL PHOSPHONATE, IODIDE ION, ... 著者 Ponnuraj, K, Xu, Y, Macon, K, Moore, D, Volanakis, J.E, Narayana, S.V. 登録日 2003-12-09 公開日 2004-12-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural analysis of engineered Bb fragment of complement factor B: insights into the activation mechanism of the alternative pathway C3-convertase. Mol.Cell, 14, 2004
3BLJ	Crystal structure of human poly(ADP-ribose) polymerase 15, catalytic fragment 分子名称: CHLORIDE ION, GLYCEROL, Poly(ADP-ribose) polymerase 15, ... 著者 Karlberg, T, Lehtio, L, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kallas, A, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Welin, M, Weigelt, J, Structural Genomics Consortium (SGC) 登録日 2007-12-11 公開日 2007-12-25 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural Basis for Lack of ADP-ribosyltransferase Activity in Poly(ADP-ribose) Polymerase-13/Zinc Finger Antiviral Protein. J.Biol.Chem., 290, 2015
3B3W	Crystal structure of the S228A mutant of the aminopeptidase from Vibrio proteolyticus in complex with leucine 分子名称: Bacterial leucyl aminopeptidase, LEUCINE, SODIUM ION, ... 著者 Ataie, N.J, Hoang, Q.Q, Zahniser, M.P.D, Milne, A, Petsko, G.A, Ringe, D. 登録日 2007-10-22 公開日 2007-11-27 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Zinc coordination geometry and ligand binding affinity: the structural and kinetic analysis of the second-shell serine 228 residue and the methionine 180 residue of the aminopeptidase from Vibrio proteolyticus. Biochemistry, 47, 2008
3KBK	Epi-isozizaene synthase complexed with Hg 分子名称: CHLORIDE ION, Epi-isozizaene synthase, MERCURY (II) ION, ... 著者 Aaron, J.A, Lin, X, Cane, D.E, Christianson, D.W. 登録日 2009-10-20 公開日 2010-02-09 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of Epi-Isozizaene Synthase from Streptomyces coelicolor A3(2), a Platform for New Terpenoid Cyclization Templates Biochemistry, 49, 2010
3B7I	Crystal structure of the S228A mutant of the aminopeptidase from Vibrio proteolyticus in complex with leucine phosphonic acid 分子名称: Bacterial leucyl aminopeptidase, LEUCINE, LEUCINE PHOSPHONIC ACID, ... 著者 Ataie, N.J, Hoang, Q.Q, Zahniser, M.P.D, Milne, A, Petsko, G.A, Ringe, D. 登録日 2007-10-30 公開日 2007-11-27 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Zinc coordination geometry and ligand binding affinity: the structural and kinetic analysis of the second-shell serine 228 residue and the methionine 180 residue of the aminopeptidase from Vibrio proteolyticus. Biochemistry, 47, 2008
3I0X	Crystal structure of Clostridium acetobutylicum 8-oxoguanine glycosylase/lyase in complex with dsDNA containing adenine opposite to 8-oxoG 分子名称: 5'-D(*AP*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*GP*AP*CP*AP*TP*GP*GP*A)-3', 8-oxoguanine-DNA-glycosylase, ... 著者 Faucher, F, Doublie, S. 登録日 2009-06-25 公開日 2009-09-29 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis for the lack of opposite base specificity of Clostridium acetobutylicum 8-oxoguanine DNA glycosylase. Dna Repair, 8, 2009
4IIC	Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with isofagomine 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Suzuki, K, Sumitani, J, Kawaguchi, T, Fushinobu, S. 登録日 2012-12-20 公開日 2013-04-10 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structures of glycoside hydrolase family 3 beta-glucosidase 1 from Aspergillus aculeatus Biochem.J., 452, 2013
3B3B	Crystal structure of E. coli Aminopeptidase N in complex with tryptophan 分子名称: Aminopeptidase N, GLYCEROL, MALONATE ION, ... 著者 Addlagatta, A. 登録日 2007-10-19 公開日 2008-05-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural basis for the unusual specificity of Escherichia coli aminopeptidase N. Biochemistry, 47, 2008

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