PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

---

1ITY	Solution structure of the DNA binding domain of human TRF1 分子名称: TRF1 著者 Nishikawa, T, Okamura, H, Nagadoi, A, Konig, P, Rhodes, D, Nishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2002-02-15 公開日 2002-03-06 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Solution structure of a telomeric DNA complex of human TRF1 Structure, 9, 2001
1RXW	Crystal structure of A. fulgidus FEN-1 bound to DNA 分子名称: 5'-d(*C*pG*pA*pT*pG*pC*pT*pA)-3', 5'-d(*T*pA*pG*pC*pA*pT*pC*pG*pG)-3', Flap structure-specific endonuclease 著者 Chapados, B.R, Hosfield, D.J, Han, S, Qiu, J, Yelent, B, Shen, B, Tainer, J.A. 登録日 2003-12-18 公開日 2004-01-27 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Basis for FEN-1 Substrate Specificity and PCNA-Mediated Activation in DNA Replication and Repair Cell(Cambridge,Mass.), 116, 2004
2JWV	Structure of a high affinity anti-NFkB RNA aptamer 分子名称: RNA (29-MER) 著者 Reiter, N.J, Maher III, L, Butcher, S.E. 登録日 2007-10-25 公開日 2008-01-08 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 DNA mimicry by a high-affinity anti-NF-kappaB RNA aptamer Nucleic Acids Res., 36, 2008
1FN2	9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE BOUND TO D(CGTACG)2 分子名称: 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE, COBALT (II) ION, DNA (5'-D(*CP*GP*TP*AP*CP*G)-3'), ... 著者 Adams, A, Guss, J.M, Collyer, C.A, Denny, W.A, Wakelin, L.P.G. 登録日 2000-08-19 公開日 2000-10-30 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A novel form of intercalation involving four DNA duplexes in an acridine-4-carboxamide complex of d(CGTACG)(2). Nucleic Acids Res., 28, 2000
3I6W	Structure and Activation Mechanism of the CHK2 DNA-Damage Checkpoint Kinase 分子名称: Serine/threonine-protein kinase Chk2 著者 Pavletich, N.P. 登録日 2009-07-07 公開日 2009-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Structure and activation mechanism of the CHK2 DNA damage checkpoint kinase. Mol.Cell, 35, 2009
3I6U	Structure and Activation Mechanism of the CHK2 DNA-Damage Checkpoint Kinase 分子名称: Serine/threonine-protein kinase Chk2 著者 Pavletich, N.P. 登録日 2009-07-07 公開日 2009-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure and activation mechanism of the CHK2 DNA damage checkpoint kinase. Mol.Cell, 35, 2009
1LEJ	NMR Structure of a 1:1 Complex of Polyamide (Im-Py-Beta-Im-Beta-Im-Py-Beta-Dp) with the Tridecamer DNA Duplex 5'-CCAAAGAGAAGCG-3' 分子名称: 5'-D(*CP*CP*AP*AP*AP*GP*AP*GP*AP*AP*GP*CP*G)-3', 5'-D(*CP*GP*CP*TP*TP*CP*TP*CP*TP*TP*TP*GP*G)-3', IMIDAZOLE-PYRROLE-BETA ALANINE-IMIDAZOLE-BETA ALANINE-IMIDAZOLE-PYRROLE-BETA ALANINE-DIMETHYLAMINO PROPYLAMIDE 著者 Urbach, A.R, Love, J.J, Ross, S.A, Dervan, P.B. 登録日 2002-04-09 公開日 2002-05-08 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structure of a beta-alanine-linked polyamide bound to a full helical turn of purine tract DNA in the 1:1 motif. J.Mol.Biol., 320, 2002
7C0G	Aca1 in complex with 14bp palindromic DNA target 分子名称: Aca1, palindromic DNA target 著者 Liu, Y.H, Zhang, L.S, Wu, B.X, Huang, H.D. 登録日 2020-05-01 公開日 2021-05-05 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Aca1 in complex with 14bp palindromic DNA target To Be Published
1ZFM	AGC Duplex B-DNA 分子名称: 5'-D(*CP*CP*GP*CP*TP*AP*GP*CP*GP*G)-3' 著者 Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S. 登録日 2005-04-20 公開日 2005-05-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 How sequence defines structure: a crystallographic map of DNA structure and conformation. Proc.Natl.Acad.Sci.Usa, 102, 2005
1ZFF	TTC Duplex B-DNA 分子名称: 5'-D(*CP*CP*GP*AP*AP*TP*TP*CP*GP*G)-3' 著者 Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S. 登録日 2005-04-20 公開日 2005-05-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (0.94 Å) 主引用文献 How sequence defines structure: a crystallographic map of DNA structure and conformation. Proc.Natl.Acad.Sci.Usa, 102, 2005
1L8R	Structure of the Retinal Determination Protein Dachshund Reveals a DNA-Binding Motif 分子名称: Dachshund 著者 Kim, S.S, Zhang, R, Braunstein, S.E, Joachimiak, A, Cvekl, A, Hegde, R.S. 登録日 2002-03-21 公開日 2002-06-26 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structure of the retinal determination protein Dachshund reveals a DNA binding motif. Structure, 10, 2002
3UTB	Crystal Structure of Nucleosome Core Particle Assembled with the 146b Alpha-Satellite Sequence (NCP146b) 分子名称: 146-mer DNA, Histone H2A, Histone H2B 1.1, ... 著者 Chua, E.Y.D, Vasudevan, D, Davey, G.E, Wu, B, Davey, C.A. 登録日 2011-11-25 公開日 2012-04-11 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The mechanics behind DNA sequence-dependent properties of the nucleosome Nucleic Acids Res., 40, 2012
3UT9	Crystal Structure of Nucleosome Core Particle Assembled with a Palindromic Widom '601' Derivative (NCP-601L) 分子名称: 145-mer DNA, CHLORIDE ION, Histone H2A, ... 著者 Chua, E.Y.D, Vasudevan, D, Davey, G.E, Wu, B, Davey, C.A. 登録日 2011-11-25 公開日 2012-04-11 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The mechanics behind DNA sequence-dependent properties of the nucleosome Nucleic Acids Res., 40, 2012
3UTA	Crystal Structure of Nucleosome Core Particle Assembled with an Alpha-Satellite Sequence Containing Two TTAAA elements (NCP-TA2) 分子名称: 145-mer DNA, CHLORIDE ION, Histone H2A, ... 著者 Chua, E.Y.D, Vasudevan, D, Davey, G.E, Wu, B, Davey, C.A. 登録日 2011-11-25 公開日 2012-04-11 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 The mechanics behind DNA sequence-dependent properties of the nucleosome Nucleic Acids Res., 40, 2012
7M9C	ADP-AlF3 bound TnsC structure in open form 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (34-MER), TnsC 著者 Park, J, Tsai, A.W.L, Mehrotra, E, Kellogg, E.H. 登録日 2021-03-30 公開日 2021-07-28 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural basis for target site selection in RNA-guided DNA transposition systems. Science, 373, 2021
1ZFH	TTA Duplex B-DNA 分子名称: 5'-D(*CP*CP*TP*AP*AP*TP*TP*AP*GP*G)-3' 著者 Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S. 登録日 2005-04-20 公開日 2005-05-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 How sequence defines structure: a crystallographic map of DNA structure and conformation. Proc.Natl.Acad.Sci.Usa, 102, 2005
1FN1	CRYSTAL STRUCTURE OF 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE BOUND TO D(CG(5BR)UACG)2 分子名称: 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE, COBALT (II) ION, DNA (5'-D(*CP*GP*(BRO)UP*AP*CP*G)-3'), ... 著者 Adams, A, Guss, J.M, Collyer, C.A, Denny, W.A, Wakelin, L.P.G. 登録日 2000-08-19 公開日 2000-10-30 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A novel form of intercalation involving four DNA duplexes in an acridine-4-carboxamide complex of d(CGTACG)(2). Nucleic Acids Res., 28, 2000
1NZM	NMR structure of the parallel-stranded DNA quadruplex d(TTAGGGT)4 complexed with the telomerase inhibitor RHPS4 分子名称: 3,11-DIFLUORO-6,8,13-TRIMETHYL-8H-QUINO[4,3,2-KL]ACRIDIN-13-IUM, 5'-D(*TP*TP*AP*GP*GP*GP*T)-3', POTASSIUM ION 著者 Gavathiotis, E, Heald, R.A, Stevens, M.F.G, Searle, M.S. 登録日 2003-02-18 公開日 2003-11-04 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Drug Recognition and Stabilisation of the Parallel-stranded DNA Quadruplex d(TTAGGGT)4 Containing the Human Telomeric Repeat J.Mol.Biol., 334, 2003
3WRR	Minute virus of mice non-structural protein-1N-terminal nuclease domain reveals a unique Zn2+ coordination in the active site pocket and shows a novel mode of DNA recognition at the origin of replication 分子名称: COPPER (II) ION, Non-capsid protein NS-1 著者 Tewary, S.K, Zhao, H, Tang, L. 登録日 2014-02-27 公開日 2015-01-21 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 Structures of minute virus of mice replication initiator protein N-terminal domain: Insights into DNA nicking and origin binding. Virology, 476C, 2014
1ZFE	GCA Duplex B-DNA 分子名称: 5'-D(*CP*CP*TP*GP*CP*GP*CP*AP*GP*G)-3' 著者 Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S. 登録日 2005-04-20 公開日 2005-05-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 How sequence defines structure: a crystallographic map of DNA structure and conformation. Proc.Natl.Acad.Sci.Usa, 102, 2005
3WTF	Structure of PAXX 分子名称: Uncharacterized protein C9orf142 著者 Ochi, T, Blundell, T.L. 登録日 2014-04-09 公開日 2015-01-21 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.451 Å) 主引用文献 DNA repair. PAXX, a paralog of XRCC4 and XLF, interacts with Ku to promote DNA double-strand break repair. Science, 347, 2015
1ZF5	GCT duplex B-DNA 分子名称: 5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3' 著者 Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S. 登録日 2005-04-19 公開日 2005-05-10 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (0.99 Å) 主引用文献 How sequence defines structure: a crystallographic map of DNA structure and conformation. Proc.Natl.Acad.Sci.Usa, 102, 2005
1SNH	Solution structure of the DNA Decamer Duplex Containing Double TG Mismatches of Cis-syn Cyclobutane Pyrimidine Dimer 分子名称: 5'-D(*CP*GP*CP*AP*TP*TP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*TP*GP*GP*TP*GP*CP*G)-3' 著者 Lee, J.H, Park, C.J, Shin, J.S, Ikegami, T, Akutsu, H, Choi, B.S. 登録日 2004-03-11 公開日 2004-05-18 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 NMR structure of the DNA decamer duplex containing double T*G mismatches of cis-syn cyclobutane pyrimidine dimer: implications for DNA damage recognition by the XPC-hHR23B complex. Nucleic Acids Res., 32, 2004
1ZFC	ATC Duplex B-DNA 分子名称: 5'-D(*CP*CP*GP*AP*TP*AP*TP*CP*GP*G)-3' 著者 Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S. 登録日 2005-04-20 公開日 2005-05-10 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 How sequence defines structure: a crystallographic map of DNA structure and conformation. Proc.Natl.Acad.Sci.Usa, 102, 2005
277D	SUBSTITUTIONS AT C2' OF DAUNOSAMINE IN THE ANTICANCER DAUNORUBICIN ALTER ITS DNA-BINDING SEQUENCE SPECIFICITY 分子名称: 2'-BROMO-4'-EPIDAUNORUBICIN, 5'-D(*CP*GP*CP*(G49)P*CP*G)-3' 著者 Gao, Y.-G, Priebe, W, Wang, A.H.-J. 登録日 1996-07-22 公開日 1996-09-16 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Substitutions at C2' of daunosamine in the anticancer drug daunorubicin alter its DNA-binding sequence specificity. Eur.J.Biochem., 240, 1996

<329330331332333334335336337338339340341342343344>