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5E6T
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Crystal structure of bovine norovirus P domain
分子名称: Capsid, ZINC ION
著者Singh, B.K, Hansman, G.S.
登録日2015-10-10
公開日2015-12-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Structural analysis of bovine norovirus protruding domain.
Virology, 487, 2015
5WJ6
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Crystal structure of glutaminase C in complex with inhibitor 2-phenyl-N-{5-[4-({5-[(phenylacetyl)amino]-1,3,4-thiadiazol-2-yl}amino)piperidin-1-yl]-1,3,4-thiadiazol-2-yl}acetamide (UPGL-00004)
分子名称: 2-phenyl-N-{5-[4-({5-[(phenylacetyl)amino]-1,3,4-thiadiazol-2-yl}amino)piperidin-1-yl]-1,3,4-thiadiazol-2-yl}acetamide, Glutaminase kidney isoform, mitochondrial
著者Huang, Q, Cerione, R.A.
登録日2017-07-21
公開日2018-01-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.445 Å)
主引用文献Characterization of the interactions of potent allosteric inhibitors with glutaminase C, a key enzyme in cancer cell glutamine metabolism.
J. Biol. Chem., 293, 2018
5ZJU
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Crystal structure of in vitro expressed and assembled PCV2 Virus-like Particle
分子名称: Capsid protein
著者Yuan, Y.A, Mo, X.
登録日2018-03-22
公開日2019-02-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural roles of PCV2 capsid protein N-terminus in PCV2 particle assembly and identification of PCV2 type-specific neutralizing epitope.
PLoS Pathog., 15, 2019
1PLG
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EVIDENCE FOR THE EXTENDED HELICAL NATURE OF POLYSACCHARIDE EPITOPES. THE 2.8 ANGSTROMS RESOLUTION STRUCTURE AND THERMODYNAMICS OF LIGAND BINDING OF AN ANTIGEN BINDING FRAGMENT SPECIFIC FOR ALPHA-(2->8)-POLYSIALIC ACID
分子名称: IGG2A=KAPPA=
著者Evans, S.V, Sigurskjold, B.W, Jennings, H.J, Brisson, J.-R, Tse, W.C, To, R, Altman, E, Frosch, M, Weisgerber, C, Kratzin, H, Klebert, S, Vaesen, M, Bitter-Suermann, D, Rose, D.R, Young, N.M, Bundle, D.R.
登録日1995-04-24
公開日1996-04-03
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Evidence for the extended helical nature of polysaccharide epitopes. The 2.8 A resolution structure and thermodynamics of ligand binding of an antigen binding fragment specific for alpha-(2-->8)-polysialic acid.
Biochemistry, 34, 1995
5WD7
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Structure of a bacterial polysialyltransferase in complex with fondaparinux
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-methyl 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranoside, SULFATE ION, SiaD
著者Worrall, L.J, Lizak, C, Strynadka, N.C.J.
登録日2017-07-04
公開日2017-08-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献X-ray crystallographic structure of a bacterial polysialyltransferase provides insight into the biosynthesis of capsular polysialic acid.
Sci Rep, 7, 2017
5GZ0
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Crystal structure of FM329, a recombinant Fab adopted from cetuximab
分子名称: FM329 heavy chain, FM329 light chain
著者Sim, D.W, Kim, J.H, Kim, Y.P, Won, H.S.
登録日2016-09-26
公開日2017-10-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of FM329, a recombinant Fab adopted from cetuximab
To Be Published
1EMN
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BU of 1emn by Molmil
NMR STUDY OF A PAIR OF FIBRILLIN CA2+ BINDING EPIDERMAL GROWTH FACTOR-LIKE DOMAINS, MINIMIZED AVERAGE STRUCTURE
分子名称: CALCIUM ION, FIBRILLIN
著者Downing, A.K, Campbell, I.D, Handford, P.A.
登録日1996-08-05
公開日1996-12-23
最終更新日2021-10-27
実験手法SOLUTION NMR
主引用文献Solution structure of a pair of calcium-binding epidermal growth factor-like domains: implications for the Marfan syndrome and other genetic disorders.
Cell(Cambridge,Mass.), 85, 1996
5G5X
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CBS domain tandem of site-2 protease from Archaeoglobus fulgidus in complex with llama Nanobody - nucleotide-bound form
分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, NANOBODY, ...
著者Schacherl, M, Baumann, U.
登録日2016-06-09
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystallographic and biochemical characterization of the dimeric architecture of site-2 protease.
Biochim. Biophys. Acta, 1859, 2017
1EMO
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BU of 1emo by Molmil
NMR STUDY OF A PAIR OF FIBRILLIN CA2+ BINDING EPIDERMAL GROWTH FACTOR-LIKE DOMAINS, 22 STRUCTURES
分子名称: CALCIUM ION, FIBRILLIN
著者Downing, A.K, Campbell, I.D, Handford, P.A.
登録日1996-08-05
公開日1996-12-23
最終更新日2021-10-27
実験手法SOLUTION NMR
主引用文献Solution structure of a pair of calcium-binding epidermal growth factor-like domains: implications for the Marfan syndrome and other genetic disorders.
Cell(Cambridge,Mass.), 85, 1996
6JOD
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BU of 6jod by Molmil
Angiotensin II type 2 receptor with ligand
分子名称: Angiotensin II, Heavy chain of 4A03Fab, Light chain of 4A03Fab, ...
著者Asada, H, Iwata, S, Hirata, K, Shimamura, T.
登録日2019-03-20
公開日2020-01-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The Crystal Structure of Angiotensin II Type 2 Receptor with Endogenous Peptide Hormone.
Structure, 28, 2020
1RMD
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BU of 1rmd by Molmil
RAG1 DIMERIZATION DOMAIN
分子名称: RAG1, ZINC ION
著者Bellon, S.F, Rodgers, K.K, Schatz, D.G, Coleman, J.E, Steitz, T.A.
登録日1997-01-10
公開日1997-07-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the RAG1 dimerization domain reveals multiple zinc-binding motifs including a novel zinc binuclear cluster.
Nat.Struct.Biol., 4, 1997
5WCN
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Structure of a bacterial polysialyltransferase in complex with CDP
分子名称: CYTIDINE-5'-DIPHOSPHATE, SULFATE ION, SiaD
著者Worrall, L.J, Lizak, C, Strynadka, N.C.J.
登録日2017-06-30
公開日2017-08-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献X-ray crystallographic structure of a bacterial polysialyltransferase provides insight into the biosynthesis of capsular polysialic acid.
Sci Rep, 7, 2017
8QZ3
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BU of 8qz3 by Molmil
Crystal structure of human two pore domain potassium ion channel TREK-2 (K2P10.1) in complex with an activatory nanobody (Nb67)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Nanobody 67, POTASSIUM ION, ...
著者Baronina, A, Pike, A.C.W, Rodstrom, K.E.J, Ang, J, Bushell, S.R, Chalk, R, Mukhopadhyay, S.M.M, Pardon, E, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Burgess-Brown, N.A, Tucker, S.J, Steyaert, J, Carpenter, E.P, Structural Genomics Consortium (SGC)
登録日2023-10-26
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Extracellular modulation of TREK-2 activity with nanobodies provides insight into the mechanisms of K2P channel regulation.
Nat Commun, 15, 2024
4ZH7
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BU of 4zh7 by Molmil
Structural basis of Lewisb antigen binding by the Helicobacter pylori adhesin BabA
分子名称: Outer membrane protein-adhesin, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose
著者Howard, T, Hage, N, Phillips, C, Brassington, C.A, Debreczeni, J, Overman, R, Gellert, P, Stolnik, S, Winkler, G.S, Falcone, F.H.
登録日2015-04-24
公開日2015-08-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Structural basis of Lewis(b) antigen binding by the Helicobacter pylori adhesin BabA.
Sci Adv, 1, 2015
1TCR
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BU of 1tcr by Molmil
MURINE T-CELL ANTIGEN RECEPTOR 2C CLONE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Garcia, K.C, Degano, M, Stanfield, R.L, Wilson, I.A.
登録日1996-09-12
公開日1997-03-12
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An alphabeta T cell receptor structure at 2.5 A and its orientation in the TCR-MHC complex.
Science, 274, 1996
5EUK
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BU of 5euk by Molmil
Cetuximab Fab in complex with F3H meditope variant
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cetuximab Fab heavy chain, Cetuximab Fab light chain, ...
著者Bzymek, K.P, Williams, J.C.
登録日2015-11-18
公開日2016-10-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Natural and non-natural amino-acid side-chain substitutions: affinity and diffraction studies of meditope-Fab complexes.
Acta Crystallogr F Struct Biol Commun, 72, 2016
5WT9
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Complex structure of PD-1 and nivolumab-Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of Nivolumab, Light Chain of Nivolumab, ...
著者Tan, S, Zhang, H, Chai, Y, Song, H, Tong, Z, Wang, Q, Qi, J, Wong, G, Zhu, X, Liu, W.J, Gao, S, Wang, Z, Shi, Y, Yang, F, Gao, G.F, Yan, J.
登録日2016-12-10
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献An unexpected N-terminal loop in PD-1 dominates binding by nivolumab.
Nat Commun, 8, 2017
6KMC
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BU of 6kmc by Molmil
Crystal structure of a Streptococcal protein G B1 mutant
分子名称: ACETIC ACID, Immunoglobulin G-binding protein G B1
著者Watanabe, H, Honda, S.
登録日2019-07-31
公開日2019-10-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Histidine-Mediated Intramolecular Electrostatic Repulsion for Controlling pH-Dependent Protein-Protein Interaction.
Acs Chem.Biol., 14, 2019
1T2J
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BU of 1t2j by Molmil
Crystal structure of a Human VH domain
分子名称: DI(HYDROXYETHYL)ETHER, M12-Variable Heavy domain
著者Gaur, R.K, Fischer, R, Hoffmann, K.M.V.
登録日2004-04-21
公開日2005-05-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of a human VH domain at 1.5 angstrom
To be Published
6K2I
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Solution structure of camelid nanobody Nb11 against aflatoxin B1
分子名称: camelid nanobody Nb11
著者Nie, Y, Li, S.L, He, T, Zhu, J, Yang, Y.H.
登録日2019-05-14
公開日2019-06-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of camelid nanobody Nb11 against aflatoxin B1
To Be Published
1PAJ
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BU of 1paj by Molmil
NMR SOLUTION STRUCTURE AND FLEXIBILITY OF A PEPTIDE ANTIGEN REPRESENTING THE RECEPTOR BINDING DOMAIN OF PSEUDOMONAS AERUGINOSA
分子名称: FIMBRIAL PROTEIN PRECURSOR, HYDROXIDE ION
著者Mcinnes, C, Sonnichsen, F.D, Kay, C.M, Hodges, R.S, Sykes, B.D.
登録日1993-08-25
公開日1994-01-31
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献NMR solution structure and flexibility of a peptide antigen representing the receptor binding domain of Pseudomonas aeruginosa.
Biochemistry, 32, 1993
6IC5
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BU of 6ic5 by Molmil
Human cathepsin-C in complex with dipeptidyl cyclopropyl nitrile inhibitor 2
分子名称: (2~{S})-2-azanyl-~{N}-[(1~{R},2~{R})-1-(iminomethyl)-2-[4-[4-(4-methylpiperazin-1-yl)sulfonylphenyl]phenyl]cyclopropyl]-3-thiophen-2-yl-propanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Hakansson, M, Logan, D.T, Korkmaz, B, Lesner, A, Wysocka, M, Gieldon, A, Gauthier, F, Jenne, D, Lauritzen, C, Pedersen, J.
登録日2018-12-02
公開日2019-04-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-based design and in vivo anti-arthritic activity evaluation of a potent dipeptidyl cyclopropyl nitrile inhibitor of cathepsin C.
Biochem. Pharmacol., 164, 2019
1BWW
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BU of 1bww by Molmil
BENCE-JONES IMMUNOGLOBULIN REI VARIABLE PORTION, T39K MUTANT
分子名称: PROTEIN (IG KAPPA CHAIN V-I REGION REI)
著者Uson, I, Pohl, E, Schneider, T.R, Dauter, Z, Schmidt, A, Fritz, H.J, Sheldrick, G.M.
登録日1998-09-29
公開日1998-10-07
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献1.7 A structure of the stabilized REIv mutant T39K. Application of local NCS restraints.
Acta Crystallogr.,Sect.D, 55, 1999
5HVF
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BU of 5hvf by Molmil
Crystal Structure of Thrombin-activatable Fibrinolysis Inhibitor in Complex with an Inhibitory Nanobody (VHH-i83)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CITRATE ANION, Carboxypeptidase B2, ...
著者Zhou, X, Weeks, S.D, Strelkov, S.V, Declerck, P.J.
登録日2016-01-28
公開日2016-06-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Elucidation of the molecular mechanisms of two nanobodies that inhibit thrombin-activatable fibrinolysis inhibitor activation and activated thrombin-activatable fibrinolysis inhibitor activity.
J.Thromb.Haemost., 14, 2016
6A48
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Crystal structure of reelin N-terminal region
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Reelin
著者Nagae, M, Takagi, J.
登録日2018-06-19
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural studies of reelin N-terminal region provides insights into a unique structural arrangement and functional multimerization.
J.Biochem., 169, 2021

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