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6ON8
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Crystal Structure of the Reduced Form of Apo Domain-Swapped Dimer Q108K:T51D:A28C:L36C:F57H Mutant of Human Cellular Retinol Binding Protein II
分子名称: Retinol-binding protein 2
著者Ghanbarpour, A, Geiger, J.
登録日2019-04-20
公開日2019-10-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.395 Å)
主引用文献Engineering the hCRBPII Domain-Swapped Dimer into a New Class of Protein Switches.
J.Am.Chem.Soc., 141, 2019
8E7F
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BU of 8e7f by Molmil
Crystal structure of the autotransporter Ssp from Serratia marcescens.
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Extracellular serine protease, ...
著者Hor, L, Pilapitiya, A, Panjikar, S, Paxman, J.J, Heras, B.
登録日2022-08-23
公開日2023-03-08
最終更新日2023-03-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a subtilisin-like autotransporter passenger domain reveals insights into its cytotoxic function.
Nat Commun, 14, 2023
6OKS
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CDTb Double Heptamer Long Form Mask 1 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
分子名称: ADP-ribosyltransferase binding component
著者Lacy, D.B, Sheedlo, M.J, Anderson, D.M.
登録日2019-04-15
公開日2019-10-30
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore.
Nat Microbiol, 5, 2020
8E5N
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Structure of ARG1 complex with pyrrolidine-based non-boronic acid inhibitor 10
分子名称: 1-{[(3S,4S)-3-(3-fluorophenyl)-4-{[4-(1,3,4-triethyl-1H-pyrazol-5-yl)piperidin-1-yl]methyl}pyrrolidin-1-yl]methyl}cyclopentane-1-carboxylic acid, Arginase-1, MANGANESE (II) ION
著者Palte, R.L, Gathiaka, S.
登録日2022-08-22
公開日2023-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.538 Å)
主引用文献Discovery of non-boronic acid Arginase 1 inhibitors through virtual screening and biophysical methods.
Bioorg.Med.Chem.Lett., 84, 2023
5KCJ
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Structure of the human GluN1/GluN2A LBD in complex with GNE6901
分子名称: 7-[(4-fluoranylphenoxy)methyl]-3-[(1~{R},2~{R})-2-(hydroxymethyl)cyclopropyl]-2-methyl-[1,3]thiazolo[3,2-a]pyrimidin-5-one, ACETATE ION, GLUTAMIC ACID, ...
著者Wallweber, H.J.A, Lupardus, P.J.
登録日2016-06-06
公開日2016-07-13
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Positive Allosteric Modulators of GluN2A-Containing NMDARs with Distinct Modes of Action and Impacts on Circuit Function.
Neuron, 89, 2016
5KGM
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2.95A resolution structure of Apo independent phosphoglycerate mutase from C. elegans (monoclinic form)
分子名称: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, CHLORIDE ION, MANGANESE (II) ION, ...
著者Lovell, S, Mehzabeen, N, Battaile, K.P, Yu, H, Dranchak, P, MacArthur, R, Li, Z, Carlow, T, Suga, H, Inglese, J.
登録日2016-06-13
公開日2017-04-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Macrocycle peptides delineate locked-open inhibition mechanism for microorganism phosphoglycerate mutases.
Nat Commun, 8, 2017
8E5M
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Structure of ARG1 complex with pyrrolidine-based non-boronic acid inhibitor 6
分子名称: 1-{[(3S,4S)-3-({4-[2-(4-fluorobenzene-1-sulfonyl)ethyl]piperidin-1-yl}methyl)-4-(3-fluorophenyl)pyrrolidin-1-yl]methyl}cyclopentane-1-carboxylic acid, Arginase-1, MANGANESE (II) ION
著者Palte, R.L, Gathiaka, S.
登録日2022-08-22
公開日2023-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Discovery of non-boronic acid Arginase 1 inhibitors through virtual screening and biophysical methods.
Bioorg.Med.Chem.Lett., 84, 2023
4WOE
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The duplicated taurocyamine kinase from Schistosoma mansoni with bound transition state analog (TSA) components
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NITRATE ION, ...
著者Merceron, R, Awama, A, Montserret, R, Marcillat, O, Gouet, P.
登録日2014-10-15
公開日2015-04-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Substrate-free and -bound Crystal Structures of the Duplicated Taurocyamine Kinase from the Human Parasite Schistosoma mansoni.
J.Biol.Chem., 290, 2015
5KDM
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Crystal structure of EBV tegument protein BNRF1 in complex with histone chaperone DAXX and histones H3.3-H4
分子名称: Death domain-associated protein 6, Histone H3.3, Histone H4, ...
著者Huang, H, Patel, D.
登録日2016-06-08
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural basis underlying viral hijacking of a histone chaperone complex.
Nat Commun, 7, 2016
8DMY
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BU of 8dmy by Molmil
Cryo-EM structure of cardiac muscle alpha-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha cardiac muscle 1, ...
著者Arora, A.S, Huang, H.L, Heissler, S.M, Chinthalapudi, K.
登録日2022-07-09
公開日2023-04-12
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Structural insights into actin isoforms.
Elife, 12, 2023
8DMX
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Cryo-EM structure of skeletal muscle alpha-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Arora, A.S, Huang, H.L, Heissler, S.M, Chinthalapudi, K.
登録日2022-07-08
公開日2023-04-12
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Structural insights into actin isoforms.
Elife, 12, 2023
8DNH
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BU of 8dnh by Molmil
Cryo-EM structure of nonmuscle beta-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 1, ...
著者Arora, A.S, Huang, H.L, Heissler, S.M, Chinthalapudi, K.
登録日2022-07-11
公開日2023-04-12
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献Structural insights into actin isoforms.
Elife, 12, 2023
8ED4
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Structure of the complex between the arsenite oxidase and its native electron acceptor cytochrome c552 from Pseudorhizobium sp. str. NT-26
分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, AroA, AroB, ...
著者Maher, M.J, Poddar, N.
登録日2022-09-03
公開日2023-04-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The structure of the complex between the arsenite oxidase from Pseudorhizobium banfieldiae sp. strain NT-26 and its native electron acceptor cytochrome c 552.
Acta Crystallogr D Struct Biol, 79, 2023
8EA8
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NKG2D complexed with inhibitor 4a
分子名称: DI(HYDROXYETHYL)ETHER, N-{(1S)-2-(dimethylamino)-2-oxo-1-[3-(trifluoromethyl)phenyl]ethyl}-4-[4-(trifluoromethyl)phenyl]pyridine-3-carboxamide, NKG2-D type II integral membrane protein, ...
著者Thompson, A.A, Grant, J.C, Karpowich, N.K, Sharma, S.
登録日2022-08-28
公開日2023-05-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Identification of small-molecule protein-protein interaction inhibitors for NKG2D.
Proc.Natl.Acad.Sci.USA, 120, 2023
5KGL
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BU of 5kgl by Molmil
2.45A resolution structure of Apo independent phosphoglycerate mutase from C. elegans (orthorhombic form)
分子名称: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, CHLORIDE ION, MANGANESE (II) ION, ...
著者Lovell, S, Mehzabeen, N, Battaile, K.P, Yu, H, Dranchak, P, MacArthur, R, Li, Z, Carlow, T, Suga, H, Inglese, J.
登録日2016-06-13
公開日2017-04-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Macrocycle peptides delineate locked-open inhibition mechanism for microorganism phosphoglycerate mutases.
Nat Commun, 8, 2017
8EA7
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NKG2D complexed with inhibitor 3g
分子名称: (4M)-N-{(1S)-2-(dimethylamino)-2-oxo-1-[3-(trifluoromethyl)phenyl]ethyl}-4-(1-methyl-1H-pyrazol-5-yl)-4'-(trifluoromethyl)[1,1'-biphenyl]-2-carboxamide, DI(HYDROXYETHYL)ETHER, NKG2-D type II integral membrane protein
著者Thompson, A.A, Grant, J.C, Karpowich, N.K, Sharma, S.
登録日2022-08-28
公開日2023-05-03
最終更新日2023-05-10
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Identification of small-molecule protein-protein interaction inhibitors for NKG2D.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EA5
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NKG2D complexed with inhibitor 1a
分子名称: (3S,5aS,8aR)-3-benzyl-6-[(3,5-dichlorophenyl)methyl]-1,4-dimethyloctahydropyrrolo[3,2-e][1,4]diazepine-2,5-dione, NKG2-D type II integral membrane protein, TRIETHYLENE GLYCOL
著者Thompson, A.A, Grant, J.C, Karpowich, N.K, Sharma, S.
登録日2022-08-28
公開日2023-05-03
最終更新日2023-05-10
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Identification of small-molecule protein-protein interaction inhibitors for NKG2D.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EA9
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NKG2D complexed with inhibitor 4d
分子名称: DI(HYDROXYETHYL)ETHER, N-[(1S)-1-[3,5-bis(trifluoromethyl)phenyl]-2-(dimethylamino)-2-oxoethyl]-4-[4-(trifluoromethyl)phenyl]pyridine-3-carboxamide, NKG2-D type II integral membrane protein, ...
著者Thompson, A.A, Grant, J.C, Karpowich, N.K, Sharma, S.
登録日2022-08-28
公開日2023-05-03
最終更新日2023-05-10
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Identification of small-molecule protein-protein interaction inhibitors for NKG2D.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EAB
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NKG2D complexed with inhibitor 4f
分子名称: DI(HYDROXYETHYL)ETHER, N-[(1S)-2-oxo-1-[3-(trifluoromethyl)phenyl]-2-({4-[4-(trifluoromethyl)phenyl]pyridin-3-yl}amino)ethyl]-4-[4-(trifluoromethyl)phenyl]pyridine-3-carboxamide, NKG2-D type II integral membrane protein
著者Thompson, A.A, Grant, J.C, Karpowich, N.K, Sharma, S.
登録日2022-08-28
公開日2023-05-03
最終更新日2023-05-10
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Identification of small-molecule protein-protein interaction inhibitors for NKG2D.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EA6
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NKG2D complexed with inhibitor 3e
分子名称: N-{(1S)-2-(dimethylamino)-2-oxo-1-[3-(trifluoromethyl)phenyl]ethyl}-4'-(trifluoromethyl)[1,1'-biphenyl]-2-carboxamide, NKG2-D type II integral membrane protein
著者Thompson, A.A, Grant, J.C, Karpowich, N.K, Sharma, S.
登録日2022-08-28
公開日2023-05-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Identification of small-molecule protein-protein interaction inhibitors for NKG2D.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EAA
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BU of 8eaa by Molmil
NKG2D complexed with inhibitor 4e
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, N-{(1S)-2-(dimethylamino)-1-[3-methyl-5-(trifluoromethyl)phenyl]-2-oxoethyl}-4-[4-(trifluoromethyl)phenyl]pyridine-3-carboxamide, ...
著者Thompson, A.A, Grant, J.C, Karpowich, N.K, Sharma, S.
登録日2022-08-28
公開日2023-05-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Identification of small-molecule protein-protein interaction inhibitors for NKG2D.
Proc.Natl.Acad.Sci.USA, 120, 2023
4WL0
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BU of 4wl0 by Molmil
Ligand-free structure of human platelet phosphofructokinase in an R-state, crystal form I
分子名称: ATP-dependent 6-phosphofructokinase, platelet type, PHOSPHATE ION
著者Kloos, M, Strater, N.
登録日2014-10-05
公開日2015-06-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Crystal structure of human platelet phosphofructokinase-1 locked in an activated conformation.
Biochem.J., 469, 2015
5KJ5
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Crystal structure of 2-aminomuconate 6-semialdehyde dehydrogenase N169D in complex with NAD+
分子名称: 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yang, Y, Davis, I, Ha, U, Wang, Y, Shin, I, Liu, A.
登録日2016-06-17
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.113 Å)
主引用文献A Pitcher-and-Catcher Mechanism Drives Endogenous Substrate Isomerization by a Dehydrogenase in Kynurenine Metabolism.
J.Biol.Chem., 291, 2016
6OI4
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RPN13 (19-132)-RPN2 (940-952) pY950-Ub complex
分子名称: 1,2-ETHANEDIOL, 26S proteasome non-ATPase regulatory subunit 1, Proteasomal ubiquitin receptor ADRM1, ...
著者Hemmis, C.W, Hill, C.P.
登録日2019-04-08
公開日2019-05-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Phosphorylation of Tyr-950 in the proteasome scaffolding protein RPN2 modulates its interaction with the ubiquitin receptor RPN13.
J.Biol.Chem., 294, 2019
5KLL
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Crystal structure of 2-hydroxymuconate-6-semialdehyde derived tautomeric intermediate in 2-aminomuconate 6-semialdehyde dehydrogenase N169D
分子名称: (3~{E},5~{E})-6-oxidanyl-2-oxidanylidene-hexa-3,5-dienoic acid, 2-aminomuconate 6-semialdehyde dehydrogenase, SODIUM ION
著者Yang, Y, Davis, I, Ha, U, Wang, Y, Shin, I, Liu, A.
登録日2016-06-24
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献A Pitcher-and-Catcher Mechanism Drives Endogenous Substrate Isomerization by a Dehydrogenase in Kynurenine Metabolism.
J.Biol.Chem., 291, 2016

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