PDB: 223790 件ウェブページステータス検索Chemie searchBIRD

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6QRS	X-ray radiation dose series on xylose isomerase - 0.13 MGy 分子名称: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, MAGNESIUM ION, ... 著者 Taberman, H, Bury, C.S, van der Woerd, M.J, Snell, E.H, Garman, E.F. 登録日 2019-02-19 公開日 2019-07-17 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.17 Å) 主引用文献 Structural knowledge or X-ray damage? A case study on xylose isomerase illustrating both. J.Synchrotron Radiat., 26, 2019
6QSL	mTFP* closed conformation: I197C-Y200H-Y204H mutant for enhanced metal binding 分子名称: GFP-like fluorescent chromoprotein cFP484 著者 Fischer, J, Renn, D, Arold, T.A, Groll, M. 登録日 2019-02-21 公開日 2020-01-01 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A Robust and Versatile Host Protein for the Design and Evaluation of Artificial Metal Centers Acs Catalysis, 2019
4UTR	Crystal structure of zebrafish Sirtuin 5 in complex with glutarylated CPS1-peptide 分子名称: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, GLUTARIC ACID, ... 著者 Pannek, M, Gertz, M, Steegborn, C. 登録日 2014-07-22 公開日 2014-08-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Chemical Probing of the Human Sirtuin 5 Active Site Reveals its Substrate Acyl Specificity and Peptide-Based Inhibitors. Angew.Chem.Int.Ed.Engl., 53, 2014
6DK3	HUMAN MITOCHONDRIAL SERINE HYDROXYMETHYLTRANSFERASe 2 分子名称: Serine hydroxymethyltransferase, mitochondrial, UNKNOWN ATOM OR ION 著者 Dong, A, Wu, H, Zeng, H, Loppnau, P, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC) 登録日 2018-05-28 公開日 2018-06-20 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 HUMAN MITOCHONDRIAL SERINE HYDROXYMETHYLTRANSFERASe 2 to be published
6QVE	NgCKK (Naegleria Gruberi CKK) decorated 14pf taxol-GDP microtubule 分子名称: Beta1-tubulin, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Atherton, J.M, Luo, Y, Xiang, S, Yang, C, Jiang, K, Stangier, M, Vemu, A, Cook, A, Wang, S, Roll-Mecak, A, Steinmetz, M.O, Akhmanova, A, Baldus, M, Moores, C.A. 登録日 2019-03-01 公開日 2019-11-27 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structural determinants of microtubule minus end preference in CAMSAP CKK domains. Nat Commun, 10, 2019
5W9L	MERS S ectodomain trimer in complex with variable domain of neutralizing antibody G4 分子名称: G4 VH, G4 VL, Spike glycoprotein 著者 Pallesen, J, Ward, A.B. 登録日 2017-06-23 公開日 2017-08-16 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Immunogenicity and structures of a rationally designed prefusion MERS-CoV spike antigen. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6QUQ	Crystal structure of glutathionylated glycolytic glyceraldehyde-3- phosphate dehydrogenase from Arabidopsis thaliana (AtGAPC1) 分子名称: GLUTATHIONE, Glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic, ... 著者 Fermani, S, Zaffagnini, M, Falini, G, Trost, P. 登録日 2019-02-28 公開日 2019-12-04 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.993 Å) 主引用文献 Glutathionylation primes soluble glyceraldehyde-3-phosphate dehydrogenase for late collapse into insoluble aggregates. Proc.Natl.Acad.Sci.USA, 116, 2019
6QW8	Crystal structure of CTX-M-15 complexed with relebactam (16 hour soak) 分子名称: (2S,5R)-1-formyl-N-(piperidin-4-yl)-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase, GLYCEROL, ... 著者 Tooke, C.L, Hinchliffe, P, Spencer, J. 登録日 2019-03-05 公開日 2019-08-21 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Molecular Basis of Class A beta-Lactamase Inhibition by Relebactam. Antimicrob.Agents Chemother., 63, 2019
6QUY	NgCKK (N.Gruberi CKK) decorated 13pf taxol-GDP microtubule 分子名称: CKK domain protein, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Atherton, J.M, Luo, Y, Xiang, S, Yang, C, Jiang, K, Stangier, M, Vemu, A, Cook, A, Wang, S, Roll-Mecak, A, Steinmetz, M.O, Akhmanova, A, Baldus, M, Moores, C.A. 登録日 2019-02-28 公開日 2019-11-27 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural determinants of microtubule minus end preference in CAMSAP CKK domains. Nat Commun, 10, 2019
6QWE	Crystal structure of KPC-4 分子名称: Beta-lactamase, GLYCEROL, SULFATE ION 著者 Tooke, C.L, Hinchliffe, P, Spencer, J. 登録日 2019-03-05 公開日 2019-08-21 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Molecular Basis of Class A beta-Lactamase Inhibition by Relebactam. Antimicrob.Agents Chemother., 63, 2019
5L6L	Structure of Caulobacter crescentus VapBC1 bound to operator DNA 分子名称: DNA (27-MER), Ribonuclease VapC, VapB family protein 著者 Bendtsen, K.L, Xu, K, Luckmann, M, Brodersen, D.E. 登録日 2016-05-30 公開日 2016-12-28 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Toxin inhibition in C. crescentus VapBC1 is mediated by a flexible pseudo-palindromic protein motif and modulated by DNA binding. Nucleic Acids Res., 45, 2017
6QWO	Zinc-reconstituted ODP from T. maritima 分子名称: Oxygen-binding diiron protein, ZINC ION 著者 Muok, A.R, Crane, B.R. 登録日 2019-03-05 公開日 2019-06-19 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 A di-iron protein recruited as an Fe[II] and oxygen sensor for bacterial chemotaxis functions by stabilizing an iron-peroxy species. Proc.Natl.Acad.Sci.USA, 116, 2019
6QV7	Crystal structure of a CHAD domain from Chlorobium tepidum 分子名称: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, SULFATE ION, ... 著者 Lorenzo-Orts, L, Hothorn, M. 登録日 2019-03-01 公開日 2019-05-29 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Molecular characterization of CHAD domains as inorganic polyphosphate-binding modules. Life Sci Alliance, 2, 2019
4UJ5	Crystal structure of human Rab11-Rabin8-FIP3 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, RAB-3A-INTERACTING PROTEIN, ... 著者 Vetter, M, Lorentzen, E. 登録日 2015-04-08 公開日 2015-08-12 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.604 Å) 主引用文献 Structure of Rab11-Fip3-Rabin8 Reveals Simultaneous Binding of Fip3 and Rabin8 Effectors to Rab11. Nat.Struct.Mol.Biol., 22, 2015
6QV8	Staphylococcus aureus superoxide dismutase SodM double mutant 分子名称: MANGANESE (II) ION, Superoxide dismutase 著者 Basle, A, Barwinska-Sendra, A, Waldron, K. 登録日 2019-03-01 公開日 2020-03-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 An evolutionary path to altered cofactor specificity in a metalloenzyme. Nat Commun, 11, 2020
6QVA	Crystal structure of a CHAD domain from Chlorobium tepidum in complex with inorganic polyphosphate 分子名称: 1,2-ETHANEDIOL, CHAD domain, PHOSPHATE ION, ... 著者 Lorenzo-Orts, L, Hothorn, M. 登録日 2019-03-01 公開日 2019-05-29 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Molecular characterization of CHAD domains as inorganic polyphosphate-binding modules. Life Sci Alliance, 2, 2019
4UNY	Structure of the A_Equine_Newmarket_2_93 H3 haemagglutinin in complex with 6SO4-3SLN 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, H3 HAEMAGGLUTININ HA2 CHAIN, ... 著者 Vachieri, S.G, Collins, P.J, Haire, L.F, Ogrodowicz, R.W, Martin, S.R, Walker, P.A, Xiong, X, Gamblin, S.J, Skehel, J.J. 登録日 2014-05-31 公開日 2014-07-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Recent Evolution of Equine Influenza and the Origin of Canine Influenza. Proc.Natl.Acad.Sci.USA, 111, 2014
5KQE	Solution structure of P2a-J2a/b-P2b of medaka telomerase RNA 分子名称: Telomerase RNA P2ab 著者 Wang, Y, Feigon, J. 登録日 2016-07-06 公開日 2016-08-24 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural conservation in the template/pseudoknot domain of vertebrate telomerase RNA from teleost fish to human. Proc.Natl.Acad.Sci.USA, 113, 2016
6QPI	Cryo-EM structure of calcium-free mTMEM16F lipid scramblase in nanodisc 分子名称: Anoctamin-6 著者 Alvadia, C, Lim, N.K, Clerico Mosina, V, Oostergetel, G.T, Dutzler, R, Paulino, C. 登録日 2019-02-14 公開日 2019-03-06 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Cryo-EM structures and functional characterization of the murine lipid scramblase TMEM16F. Elife, 8, 2019
6DOG	Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 600 s at 21 C 分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'), GLYCEROL, ... 著者 Samara, N.L, Yang, W. 登録日 2018-06-09 公開日 2018-08-15 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.285 Å) 主引用文献 Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol., 25, 2018
5L34	Calculated solution structure of [D-Trp3]-Contryphan-Vc2 分子名称: [D-Trp3]-Contryphan-Vc2 著者 Drane, S.B, Chhabra, S, MacRaild, C.A. 登録日 2016-08-03 公開日 2017-03-08 最終更新日 2023-11-15 実験手法 SOLUTION NMR 主引用文献 Structure and activity of contryphan-Vc2: Importance of the d-amino acid residue. Toxicon, 129, 2017
6DOU	Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 200 mM Rb+ for 120 s at 21 C 分子名称: 1,2-ETHANEDIOL, 5'-R(*AP*CP*AP*U)-3' portion of cleaved RNA 5'-R(*AP*CP*AP*UP*CP*G)-3', 5'-R(P*CP*G)-3' portion of cleaved RNA 5'-R(*AP*CP*AP*UP*CP*G)-3', ... 著者 Samara, N.L, Yang, W. 登録日 2018-06-09 公開日 2018-08-15 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.487 Å) 主引用文献 Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol., 25, 2018
6QPQ	The structure of the cohesin head module elucidates the mechanism of ring opening 分子名称: Sister chromatid cohesion protein 1, Structural maintenance of chromosomes protein,Structural maintenance of chromosomes protein 著者 Li, Y, Muir, K.W, Panne, D. 登録日 2019-02-14 公開日 2020-02-05 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The structure of the cohesin ATPase elucidates the mechanism of SMC-kleisin ring opening. Nat.Struct.Mol.Biol., 27, 2020
6QTV	Crystal structure of an Arabidopsis WD40 domain in complex with an atypical bHLH transcription factor 分子名称: E3 ubiquitin-protein ligase COP1, GLYCEROL, MALONATE ION, ... 著者 Hothorn, M, Lau, K. 登録日 2019-02-25 公開日 2019-07-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.31 Å) 主引用文献 Plant photoreceptors and their signaling components compete for COP1 binding via VP peptide motifs. Embo J., 38, 2019
8S7C	Ternary Complex of Cachd1, FZD5 and LRP6 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Frizzled-5, ... 著者 Zhao, Y, Ren, J, Jones, E.Y. 登録日 2024-02-29 公開日 2024-04-24 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (4.7 Å) 主引用文献 Cachd1 interacts with Wnt receptors and regulates neuronal asymmetry in the zebrafish brain. Science, 384, 2024

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