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1D3Y
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STRUCTURE OF THE DNA TOPOISOMERASE VI A SUBUNIT
分子名称: DNA TOPOISOMERASE VI A SUBUNIT, MAGNESIUM ION, SODIUM ION
著者Nichols, M.D, DeAngelis, K.A, Keck, J.L, Berger, J.M.
登録日1999-10-01
公開日1999-11-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and function of an archaeal topoisomerase VI subunit with homology to the meiotic recombination factor Spo11.
EMBO J., 18, 1999
6C2C
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BU of 6c2c by Molmil
The molecular basis for the functional evolution of an organophosphate hydrolysing enzyme
分子名称: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ZINC ION, ...
著者Hong, N.-S, Jackson, C.J, Carr, P.D, Tokuriki, N, Baier, F, Yang, G.
登録日2018-01-08
公開日2019-01-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.597 Å)
主引用文献Higher-order epistasis shapes the fitness landscape of a xenobiotic-degrading enzyme.
Nat.Chem.Biol., 15, 2019
6W4Q
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BU of 6w4q by Molmil
Crystal structure of full-length tailspike protein 2 (TSP2, ORF211) ) from Escherichia coli O157:H7 bacteriophage CAB120
分子名称: 1,2-ETHANEDIOL, CARBONATE ION, CHLORIDE ION, ...
著者Greenfield, J, Herzberg, O.
登録日2020-03-11
公開日2021-01-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7.
Sci Rep, 10, 2020
2VMI
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The structure of seleno-methionine labelled CBM51 from Clostridium perfringens GH95
分子名称: CALCIUM ION, FIBRONECTIN TYPE III DOMAIN PROTEIN
著者Gregg, K, Finn, R, Abbott, D.W, Boraston, A.B.
登録日2008-01-25
公開日2008-02-19
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Divergent Modes of Glycan Recognition by a New Family of Carbohydrate-Binding Modules
J.Biol.Chem., 283, 2008
3TIF
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BU of 3tif by Molmil
Dimeric structure of a post-hydrolysis state of the ATP-binding cassette MJ0796 bound to ADP and Pi
分子名称: ADENOSINE-5'-DIPHOSPHATE, HYDROGENPHOSPHATE ION, ISOPROPYL ALCOHOL, ...
著者Sutton, R.B.
登録日2011-08-20
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7995 Å)
主引用文献Kinetics of the association/dissociation cycle of an ATP-binding cassette nucleotide-binding domain.
J.Biol.Chem., 287, 2012
6ITO
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Crystal structure of pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate, AMP and inhibitor Ribose 5-Phosphate
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, OXALATE ION, ...
著者Zhong, W, Cai, Q, El Sahili, A, Mu, Y, Lescar, J, Dedon, P.C.
登録日2018-11-24
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Pyruvate Kinase Regulates the Pentose-Phosphate Pathway in Response to Hypoxia in Mycobacterium tuberculosis.
J.Mol.Biol., 431, 2019
8F2R
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Human CCC complex
分子名称: COMM domain-containing protein 1, COMM domain-containing protein 10, COMM domain-containing protein 2, ...
著者Healy, M.D, McNally, K.E, Butkovic, R, Chilton, M, Kato, K, Sacharz, J, McConville, C, Moody, E.R.R, Shaw, S, Planelles-Herrero, V.J, Kadapalakere, S.Y, Ross, J, Borucu, U, Palmer, C.S, Chen, K, Croll, T.I, Hall, R.J, Caruana, N.J, Ghai, R, Nguyen, T.H.D, Heesom, K.J, Saitoh, S, Berger, I, Berger-Schaffitzel, C, Williams, T.A, Stroud, D.A, Derivery, E, Collins, B.M, Cullen, P.J.
登録日2022-11-08
公開日2023-05-24
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Structure of the endosomal Commander complex linked to Ritscher-Schinzel syndrome.
Cell, 186, 2023
2VFC
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The structure of Mycobacterium marinum arylamine N-acetyltransferase in complex with CoA
分子名称: ARYLAMINE N-ACETYLTRANSFERASE, COENZYME A
著者Fullam, E, Westwood, I.M, Anderton, M.C, Lowe, E.D, Sim, E, Noble, M.E.M.
登録日2007-11-02
公開日2007-12-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Divergence of Cofactor Recognition Across Evolution: Coenzyme a Binding in a Prokaryotic Arylamine N-Acetyltransferase.
J.Mol.Biol., 375, 2008
8F2U
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Human CCC complex
分子名称: COMM domain-containing protein 1, COMM domain-containing protein 10, COMM domain-containing protein 2, ...
著者Healy, M.D, McNally, K.E, Butkovic, R, Chilton, M, Kato, K, Sacharz, J, McConville, C, Moody, E.R.R, Shaw, S, Planelles-Herrero, V.J, Kadapalakere, S.Y, Ross, J, Borucu, U, Palmer, C.S, Chen, K, Croll, T.I, Hall, R.J, Caruana, N.J, Ghai, R, Nguyen, T.H.D, Heesom, K.J, Saitoh, S, Berger, I, Berger-Schaffitzel, C, Williams, T.A, Stroud, D.A, Derivery, E, Collins, B.M, Cullen, P.J.
登録日2022-11-08
公開日2023-05-24
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.53 Å)
主引用文献Structure of the endosomal Commander complex linked to Ritscher-Schinzel syndrome.
Cell, 186, 2023
1D5Y
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BU of 1d5y by Molmil
CRYSTAL STRUCTURE OF THE E. COLI ROB TRANSCRIPTION FACTOR IN COMPLEX WITH DNA
分子名称: DNA (5'-D(*AP*CP*TP*TP*TP*GP*AP*CP*AP*TP*TP*CP*AP*GP*TP*GP*CP*TP*GP*TP*C)-3'), DNA (5'-D(*TP*GP*AP*CP*AP*GP*CP*AP*CP*TP*GP*AP*AP*TP*GP*TP*CP*AP*AP*AP*G)-3'), ROB TRANSCRIPTION FACTOR
著者Kwon, H.J, Bennik, M.H.J, Demple, B, Ellenberger, T.
登録日1999-10-12
公開日2000-04-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the Escherichia coli Rob transcription factor in complex with DNA.
Nat.Struct.Biol., 7, 2000
1CQN
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PROTEIN AGGREGATION AND ALZHEIMER'S DISEASE: CRYSTALLOGRAPHIC ANALYSIS OF THE PHENOMENON. ENGINEERED VERSION OF THE RIBOSOMAL PROTEIN S6 USED AS A STABLE SCAFFOLD TO STUDY OLIGOMERIZATION.
分子名称: RIBOSOMAL PROTEIN S6
著者Kristensen, O, Otzen, D.E, Oliveberg, M.
登録日1999-08-08
公開日2000-09-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: a structural clue to amyloid assembly.
Proc.Natl.Acad.Sci.USA, 97, 2000
1AWC
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MOUSE GABP ALPHA/BETA DOMAIN BOUND TO DNA
分子名称: DNA (5'-D(*AP*AP*(BRU)P*GP*AP*CP*CP*GP*GP*AP*AP*GP*TP*AP*(CBR)P*AP*CP*(CBR)P*GP*GP*A)-3'), DNA (5'-D(*TP*TP*CP*CP*GP*GP*(BRU)P*GP*(BRU)P*AP*CP*TP*TP*CP*CP*GP*GP*TP*CP*AP*T)-3'), PROTEIN (GA BINDING PROTEIN ALPHA), ...
著者Batchelor, A.H, Wolberger, C.
登録日1997-10-01
公開日1998-03-18
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The structure of GABPalpha/beta: an ETS domain- ankyrin repeat heterodimer bound to DNA.
Science, 279, 1998
7ZJ3
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BU of 7zj3 by Molmil
Structure of TRIM2 RING domain in complex with UBE2D1~Ub conjugate
分子名称: Polyubiquitin-C, Tripartite motif-containing protein 2, Ubiquitin-conjugating enzyme E2 D1, ...
著者Esposito, D, Garza-Garcia, A, Dudley-Fraser, J, Rittinger, K.
登録日2022-04-08
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Divergent self-association properties of paralogous proteins TRIM2 and TRIM3 regulate their E3 ligase activity.
Nat Commun, 13, 2022
7UIC
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Mediator-PIC Early (Tail A)
分子名称: Mediator of RNA polymerase II transcription subunit 14, Mediator of RNA polymerase II transcription subunit 15, Mediator of RNA polymerase II transcription subunit 16, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UIL
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BU of 7uil by Molmil
Mediator-PIC Early (Tail A/B Dimer)
分子名称: Mediator of RNA polymerase II transcription subunit 1, Mediator of RNA polymerase II transcription subunit 14, Mediator of RNA polymerase II transcription subunit 15, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
1B6K
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HIV-1 PROTEASE COMPLEXED WITH MACROCYCLIC PEPTIDOMIMETIC INHIBITOR 5
分子名称: N-[3-(8-SEC-BUTYL-7,10-DIOXO-2-OXA-6,9-DIAZA-BICYCLO[11.2.2]HEPTADECA-1(16),13(17),14- TRIEN-11-YLAMINO)-2-HYDROXY-1-(4-HYDROXY-BENZYL)-PROPYL]-3-METHYL-2- (2-OXO-PYRROLIDIN-1-YL)-BUTYRAMIDE, RETROPEPSIN, SULFATE ION
著者Martin, J.L, Begun, J, Schindeler, A, Wickramasinghe, W.A, Alewood, D, Alewood, P.F, Bergman, D.A, Brinkworth, R.I, Abbenante, G, March, D.R, Reid, R.C, Fairlie, D.P.
登録日1999-01-17
公開日2000-01-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Molecular recognition of macrocyclic peptidomimetic inhibitors by HIV-1 protease.
Biochemistry, 38, 1999
7UIF
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Mediator-PIC Early (Core B)
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-02-15
最終更新日2023-03-08
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UIK
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BU of 7uik by Molmil
Mediator-PIC Early (Tail A + Upstream DNA & Activator)
分子名称: DNA (37-MER), DNA (38-MER), Mediator of RNA polymerase II transcription subunit 14, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-03-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UIG
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Mediator-PIC Early (Mediator A)
分子名称: DNA-directed RNA polymerase II subunit RPB1, Mediator of RNA polymerase II transcription subunit 1, Mediator of RNA polymerase II transcription subunit 10, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UIO
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BU of 7uio by Molmil
Mediator-PIC Early (Composite Model)
分子名称: ALANINE, ASPARTIC ACID, DNA (37-MER), ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-03-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UI9
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Core Mediator-PICearly (Copy A)
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-28
公開日2023-02-15
最終更新日2023-03-08
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
1ODC
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STRUCTURE OF ACETYLCHOLINESTERASE (E.C. 3.1.1.7) COMPLEXED WITH N-4'-QUINOLYL-N'-9"-(1",2",3",4"-TETRAHYDROACRIDINYL)-1,8- DIAMINOOCTANE AT 2.2A RESOLUTION
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, N-QUINOLIN-4-YL-N'-(1,2,3,4-TETRAHYDROACRIDIN-9-YL)OCTANE-1,8-DIAMINE
著者Wong, D.M, Greenblatt, H.M, Carlier, P.R, Han, Y.-F, Pang, Y.-P, Silman, I, Sussman, J.L.
登録日2003-02-15
公開日2005-03-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Complexes of Alkylene-Linked Tacrine Dimers with Torpedo Californica Acetylcholinesterase: Binding of Bis(5)-Tacrine Produces a Dramatic Rearrangement in the Active-Site Gorge.
J.Med.Chem., 49, 2006
1CQM
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PROTEIN AGGREGATION AND ALZHEIMER'S DISEASE: CRYSTALLOGRAPHIC ANALYSIS OF THE PHENOMENON. ENGINEERED VERSION OF THE RIBOSOMAL PROTEIN S6 USED AS A STABLE SCAFFOLD TO STUDY OLIGOMERIZATION.
分子名称: RIBOSOMAL PROTEIN S6
著者Kristensen, O, Otzen, D.E, Oliveberg, M.
登録日1999-08-08
公開日2000-09-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: a structural clue to amyloid assembly.
Proc.Natl.Acad.Sci.USA, 97, 2000
1CR0
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CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF THE GENE4 PROTEIN OF BACTERIOPHAGE T7
分子名称: DNA PRIMASE/HELICASE, SULFATE ION
著者Sawaya, M.R, Guo, S, Tabor, S, Richardson, C.C, Ellenberger, T.
登録日1999-08-12
公開日1999-11-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the helicase domain from the replicative helicase-primase of bacteriophage T7.
Cell(Cambridge,Mass.), 99, 1999
8F6A
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Thermoplasma acidophilum 20S proteasome - wild type
分子名称: Proteasome subunit alpha, Proteasome subunit beta
著者Chuah, J, Smith, D.
登録日2022-11-16
公開日2023-08-30
実験手法ELECTRON MICROSCOPY (2.06 Å)
主引用文献High resolution structures define divergent and convergent mechanisms of archaeal proteasome activation.
Commun Biol, 6, 2023

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