6C2C

The molecular basis for the functional evolution of an organophosphate hydrolysing enzyme

Summary for 6C2C

Descriptordihydrocoumarin hydrolase, AncDHCH1, ZINC ION, MAGNESIUM ION, ... (5 entities in total)
Functional Keywordsphosphatase, directed evolution, methyl-parathion hydrolase (mph), hydrolase, a xenobiotic degrading enzyme
Biological sourcePseudomonas sp.
Total number of polymer chains2
Total molecular weight63557.91
Authors
Hong, N.-S.,Jackson, C.J.,Carr, P.D.,Tokuriki, N.,Baier, F.,Yang, G. (deposition date: 2018-01-08, release date: 2019-01-16, Last modification date: 2019-01-23)
Primary citation
Baier, F.,Hong, N.-S.,Yang, G.,Carr, P.D.,Jackson, C.,Tokuriki, N.,Anderson, D.,Dohman, E.,Pabis, A.,Bornberg-Bauer, E.,Kamerlin, C.L.
Higher-order epistatic networks underlie the evolutionary fitness landscape of a xenobiotic-degrading enzyme
Biorxiv, 2019
Experimental method
X-RAY DIFFRACTION (1.597 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.20420 0.7% 5.2%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 6c2c
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Molmil generated image of 6c2c
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Molmil generated image of 6c2c
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More Biological unit images

Molmil generated image of 6c2c
no rotation
Molmil generated image of 6c2c
rotated about x axis by 90°
Molmil generated image of 6c2c
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (6c2c.pdb1.gz [53.62 KB])
Coordinate files for Biological unit (6c2c.pdb2.gz [53.49 KB])
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