PDB: 97138 件ウェブページステータス検索Chemie searchBIRD

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6AK9	Pre-catalytic Ternary Complex of Human DNA Polymerase Mu with Templating Cytosine and Incoming Ca-8oxodGTP 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ... 著者 Chang, Y.K, Wu, W.J, Tsai, M.D. 登録日 2018-08-30 公開日 2019-05-29 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions. J.Am.Chem.Soc., 141, 2019
6AK8	Pre-catalytic Ternary Complex of Human DNA Polymerase Mu with Templating Adenine and Incoming Ca-8oxodGTP 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ... 著者 Chang, Y.K, Wu, W.J, Tsai, M.D. 登録日 2018-08-30 公開日 2019-05-29 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions. J.Am.Chem.Soc., 141, 2019
5Z0C	Nerol dehydrogenase from Persicaria minor 分子名称: BETA-MERCAPTOETHANOL, GLYCEROL, Nerol dehydrogenase, ... 著者 Tan, C.S, Ng, C.L, Zainal, Z. 登録日 2017-12-19 公開日 2018-01-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Structural and kinetic studies of a novel nerol dehydrogenase from Persicaria minor, a nerol-specific enzyme for citral biosynthesis. Plant Physiol. Biochem., 123, 2017
2WGC	2.2 ANGSTROMS RESOLUTION STRUCTURE ANALYSIS OF TWO REFINED N-ACETYLNEURAMINYLLACTOSE-WHEAT GERM AGGLUTININ ISOLECTIN COMPLEXES 分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, WHEAT GERM LECTIN 著者 Wright, C.S. 登録日 1990-04-03 公開日 1990-10-15 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 2.2 A resolution structure analysis of two refined N-acetylneuraminyl-lactose--wheat germ agglutinin isolectin complexes. J.Mol.Biol., 215, 1990
1MGT	CRYSTAL STRUCTURE OF O6-METHYLGUANINE-DNA METHYLTRANSFERASE FROM HYPERTHERMOPHILIC ARCHAEON PYROCOCCUS KODAKARAENSIS STRAIN KOD1 分子名称: PROTEIN (O6-METHYLGUANINE-DNA METHYLTRANSFERASE), SULFATE ION 著者 Hashimoto, H, Inoue, T, Nishioka, M, Fujiwara, S, Takagi, M, Imanaka, T, Kai, Y. 登録日 1999-01-12 公開日 2000-01-07 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Hyperthermostable protein structure maintained by intra and inter-helix ion-pairs in archaeal O6-methylguanine-DNA methyltransferase. J.Mol.Biol., 292, 1999
4D61	Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state 分子名称: 18S RRNA, 40S RIBOSOMAL PROTEIN S10, 40S RIBOSOMAL PROTEIN S11, ... 著者 Muhs, M, Hilal, T, Mielke, T, Skabkin, M.A, Sanbonmatsu, K.Y, Pestova, T.V, Spahn, C.M.T. 登録日 2014-11-07 公開日 2015-03-04 最終更新日 2017-08-30 実験手法 ELECTRON MICROSCOPY (9 Å) 主引用文献 Cryo-Em of Ribosomal 80S Complexes with Termination Factors Reveals the Translocated Cricket Paralysis Virus Ires. Mol.Cell, 57, 2015
6FC2	Crystal structure of the eIF4E-Eap1p complex from Saccharomyces cerevisiae 分子名称: CALCIUM ION, Eukaryotic translation initiation factor 4E, Protein EAP1 著者 Gruener, S, Valkov, E. 登録日 2017-12-20 公開日 2018-06-27 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Structural motifs in eIF4G and 4E-BPs modulate their binding to eIF4E to regulate translation initiation in yeast. Nucleic Acids Res., 46, 2018
6AKH	Pre-catalytic Ternary Complex of Human DNA Polymerase Mu with Templating Adenine and Incoming Mn-dUMPNPP 分子名称: 1,2-ETHANEDIOL, 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Chang, Y.K, Wu, W.J, Tsai, M.D. 登録日 2018-08-31 公開日 2019-05-29 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions. J.Am.Chem.Soc., 141, 2019
7KVR	SARS-CoV-2 Main protease immature form - FMAX Library E09 fragment 分子名称: 3C-like proteinase, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ... 著者 Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Fernandes, R.S, Oliva, G, Godoy, A.S. 登録日 2020-11-28 公開日 2020-12-09 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process. J.Mol.Biol., 433, 2021
1UTG	REFINEMENT OF THE C2221 CRYSTAL FORM OF OXIDIZED UTEROGLOBIN AT 1.34 ANGSTROMS RESOLUTION 分子名称: UTEROGLOBIN 著者 Morize, I, Surcouf, E, Vaney, M.C, Buehner, M, Mornon, J.P. 登録日 1989-04-03 公開日 1989-10-15 最終更新日 2017-11-29 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Refinement of the C222(1) crystal form of oxidized uteroglobin at 1.34 A resolution. J.Mol.Biol., 194, 1987
4UZN	The native structure of the family 46 carbohydrate-binding module (CBM46) of endo-beta-1,4-glucanase B (Cel5B) from Bacillus halodurans 分子名称: ENDO-BETA-1,4-GLUCANASE (CELULASE B) 著者 Venditto, I, Santos, H, Ferreira, L.M.A, Sakka, K, Fontes, C.M.G.A, Najmudin, S. 登録日 2014-09-05 公開日 2015-02-25 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.46 Å) 主引用文献 Family 46 Carbohydrate-Binding Modules Contribute to the Enzymatic Hydrolysis of Xyloglucan and Beta-1,3-1,4-Glucans Through Distinct Mechanisms. J.Biol.Chem., 290, 2015
7KVL	SARS-CoV-2 Main protease immature form - FMAX Library E01 fragment 分子名称: 2-chloropyridine-4-carboxamide, 3C-like proteinase, DI(HYDROXYETHYL)ETHER, ... 著者 Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Fernandes, R.S, Oliva, G, Godoy, A.S. 登録日 2020-11-28 公開日 2020-12-09 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process. J.Mol.Biol., 433, 2021
4W89	Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from metagenomic library, in complex with cellotriose 分子名称: MAGNESIUM ION, Xyloglucan-specific endo-beta-1,4-glucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose 著者 Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T. 登録日 2014-08-22 公開日 2015-03-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family. Biochemistry, 54, 2015
4UZ8	The SeMet structure of the family 46 carbohydrate-binding module (CBM46) of endo-beta-1,4-glucanase B (Cel5B) from Bacillus halodurans 分子名称: ENDO-BETA-1,4-GLUCANASE (CELULASE B), SULFATE ION 著者 Venditto, I, Santos, H, Ferreira, L.M.A, Sakka, K, Fontes, C.M.G.A, Najmudin, S. 登録日 2014-09-04 公開日 2015-02-25 最終更新日 2015-05-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Family 46 Carbohydrate-Binding Modules Contribute to the Enzymatic Hydrolysis of Xyloglucan and Beta-1,3-1,4-Glucans Through Distinct Mechanisms. J.Biol.Chem., 290, 2015
4V45	E. COLI (lacZ) BETA-GALACTOSIDASE-TRAPPED 2-F-GALACTOSYL-ENZYME INTERMEDIATE 分子名称: 2-deoxy-2-fluoro-beta-D-galactopyranose, Beta-Galactosidase, MAGNESIUM ION, ... 著者 Juers, D.H, McCarter, J.D, Withers, S.G, Matthews, B.W. 登録日 2001-09-13 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A Structural View of the Action of Escherichia Coli (Lacz) Beta-Galactosidase Biochemistry, 40, 2001
4W8Q	Crystal structure of truncated hemolysin A from P. mirabilis at 1.4 Angstroms resolution 分子名称: Hemolysin 著者 Novak, W.R.P, Glasgow, E, Thompson, J.R, Weaver, T.M. 登録日 2014-08-26 公開日 2015-07-29 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.428 Å) 主引用文献 Proteolysis of truncated hemolysin A yields a stable dimerization interface. Acta Crystallogr F Struct Biol Commun, 73, 2017
8OVA	CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : PARENTAL STRAIN 分子名称: 40S ribosomal protein L14, putative, 40S ribosomal protein S10, ... 著者 Rajan, K.S, Yonath, A. 登録日 2023-04-25 公開日 2023-11-29 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.47 Å) 主引用文献 A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei. Nat Commun, 14, 2023
8OVE	CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant 分子名称: 40S ribosomal protein L14, putative, 40S ribosomal protein S10, ... 著者 Rajan, K.S, Yonath, A. 登録日 2023-04-25 公開日 2023-11-29 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei. Nat Commun, 14, 2023
4W70	Periplasmically Produced Monomeric Single Domain Antibody (sdAb) C22A/C99V variant against Staphylococcal enterotoxin B (SEB) at pH 7.0 分子名称: SULFATE ION, Single Domain Antibody 著者 George, J, Legler, P.M. 登録日 2014-08-21 公開日 2014-11-05 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Structural and mutational analysis of a monomeric and dimeric form of a single domain antibody with implications for protein misfolding. Proteins, 82, 2014
4W81	Periplasmically Produced Monomeric Single Domain Antibody (sdAb) C22A/C99V variant against Staphylococcal enterotoxin B (SEB) at pH 8.0 分子名称: SULFATE ION, Single Domain Antibody 著者 George, J, Legler, P.M. 登録日 2014-08-22 公開日 2014-11-05 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural and mutational analysis of a monomeric and dimeric form of a single domain antibody with implications for protein misfolding. Proteins, 82, 2014
4W88	Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in complex with a xyloglucan oligosaccharide and TRIS 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, Xyloglucan-specific endo-beta-1,4-glucanase, ... 著者 Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T. 登録日 2014-08-22 公開日 2015-03-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family. Biochemistry, 54, 2015
4W8B	Crystal structure of XEG5B, a GH5 xyloglucan-specific beta-1,4-glucanase from ruminal metagenomic library, in complex with XXLG 分子名称: Exo-xyloglucanase, GLYCEROL, SULFATE ION, ... 著者 Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T. 登録日 2014-08-22 公開日 2015-03-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family. Biochemistry, 54, 2015
4W86	Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in complex with glucose and TRIS 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, Xyloglucan-specific endo-beta-1,4-glucanase, ... 著者 Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T. 登録日 2014-08-22 公開日 2015-03-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family. Biochemistry, 54, 2015
1A0B	HISTIDINE-CONTAINING PHOSPHOTRANSFER DOMAIN OF ARCB FROM ESCHERICHIA COLI 分子名称: AEROBIC RESPIRATION CONTROL SENSOR PROTEIN ARCB, ZINC ION 著者 Kato, M, Mizuno, T, Shimizu, T, Hakoshima, T. 登録日 1997-11-27 公開日 1998-03-18 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Insights into multistep phosphorelay from the crystal structure of the C-terminal HPt domain of ArcB. Cell(Cambridge,Mass.), 88, 1997
4V2X	High resolution structure of the full length tri-modular endo-beta-1, 4-glucanase B (Cel5B) from Bacillus halodurans 分子名称: ACETATE ION, CACODYLATE ION, CALCIUM ION, ... 著者 Venditto, I, Santos, H, Ferreira, L.M.A, Sakka, K, Fontes, C.M.G.A, Najmudin, S. 登録日 2014-10-15 公開日 2015-02-25 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Family 46 Carbohydrate-Binding Modules Contribute to the Enzymatic Hydrolysis of Xyloglucan and Beta-1,3-1,4-Glucans Through Distinct Mechanisms. J.Biol.Chem., 290, 2015

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