PDB: 95574 件ウェブページステータス検索Chemie searchBIRD

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9B5T	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - cluster 5 map and model (ATP/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-25 実験手法 ELECTRON MICROSCOPY (3.16 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9C0I	Structure of the DRT2 reverse transcriptase in complex with its non-coding RNA 分子名称: DNA primer, DRT2 ncRNA, MAGNESIUM ION, ... 著者 Wilkinson, M.E, Zhang, F. 登録日 2024-05-25 公開日 2024-09-04 最終更新日 2024-09-18 実験手法 ELECTRON MICROSCOPY (2.91 Å) 主引用文献 Phage-triggered reverse transcription assembles a toxic repetitive gene from a noncoding RNA. Science, 2024
9C0B	E.coli GroEL + PBZ1587 inhibitor 分子名称: 60 kDa chaperonin, N-(2-{4-[4-(aminomethyl)benzene-1-sulfonamido]phenyl}-1,3-benzoxazol-5-yl)-5-chlorothiophene-2-sulfonamide 著者 Watson, E.R, Lander, G.C. 登録日 2024-05-25 公開日 2024-08-07 最終更新日 2024-08-14 実験手法 ELECTRON MICROSCOPY (3.26 Å) 主引用文献 Bis-sulfonamido-2-phenylbenzoxazoles Validate the GroES/EL Chaperone System as a Viable Antibiotic Target. J.Am.Chem.Soc., 146, 2024
9B57	Ubiquitin E2-Ub-E3 HECT tetrahedral transthiolation intermediate mimic - state 3 分子名称: 4-aminobutanenitrile, E3 ubiquitin-protein ligase pub2, Ubiquitin, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-18 実験手法 ELECTRON MICROSCOPY (3.37 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9B5K	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - Ub(T) class 1 map and model from cluster 1 (Ub(A)/ATP/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, Large ribosomal subunit protein eL40B, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-18 実験手法 ELECTRON MICROSCOPY (3.16 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9CVE	Cryo-EM structure of Tulane virus 9-6-17 variant capsid protein VP1 5-12-18 分子名称: Capsid protein 著者 Sun, C, Jiang, W. 登録日 2024-07-29 公開日 2024-08-21 実験手法 ELECTRON MICROSCOPY (3.18 Å) 主引用文献 The 2.6 angstrom Structure of a Tulane Virus Variant with Minor Mutations Leading to Receptor Change. Biomolecules, 14, 2024
9B55	Ubiquitin E2-Ub-E3 HECT tetrahedral transthiolation intermediate mimic - state 1 分子名称: 4-aminobutanenitrile, E3 ubiquitin-protein ligase pub2, Ubiquitin, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-18 実験手法 ELECTRON MICROSCOPY (3.23 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9CVF	Cryo-EM structure of Tulane virus 9-6-17 variant capsid protein VP1 9-14-18 分子名称: Capsid protein 著者 Sun, C, Jiang, W. 登録日 2024-07-29 公開日 2024-08-21 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 The 2.6 angstrom Structure of a Tulane Virus Variant with Minor Mutations Leading to Receptor Change. Biomolecules, 14, 2024
9B5F	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 1 map and model (Ub(A)/ATP/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-18 実験手法 ELECTRON MICROSCOPY (2.78 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9EO4	Outward-open structure of human dopamine transporter bound to cocaine 分子名称: CHLORIDE ION, CHOLESTEROL, CHOLESTEROL HEMISUCCINATE, ... 著者 Nielsen, J.C, Salomon, K, Kalenderoglou, I.E, Bargmeyer, S, Pape, T, Shahsavar, A, Loland, C.J. 登録日 2024-03-14 公開日 2024-07-03 最終更新日 2024-08-28 実験手法 ELECTRON MICROSCOPY (2.66 Å) 主引用文献 Structure of the human dopamine transporter in complex with cocaine. Nature, 632, 2024
9B5S	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - cluster 4 map and model (ATP/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-25 実験手法 ELECTRON MICROSCOPY (2.96 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9B5B	Ubiquitin E2-Ub-E3 HECT tetrahedral transthiolation intermediate mimic - state 7 分子名称: 4-aminobutanenitrile, E3 ubiquitin-protein ligase pub2, Ubiquitin, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-18 実験手法 ELECTRON MICROSCOPY (3.31 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9C0C	E.coli GroEL apoenzyme 分子名称: 60 kDa chaperonin 著者 Watson, E.R, Lander, G.C. 登録日 2024-05-25 公開日 2024-08-07 最終更新日 2024-08-14 実験手法 ELECTRON MICROSCOPY (3.41 Å) 主引用文献 Bis-sulfonamido-2-phenylbenzoxazoles Validate the GroES/EL Chaperone System as a Viable Antibiotic Target. J.Am.Chem.Soc., 146, 2024
9B5M	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - consensus map and model 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-25 実験手法 ELECTRON MICROSCOPY (2.79 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9CSI	A. baumannii MsbA Bound to Cerastecin Compound 5 分子名称: 3,3'-[(1,4-dioxobutane-1,4-diyl)bis(azanediyl)]bis[(4-butylbenzene-1-sulfonamido)benzoic acid], Lipid A export ATP-binding/permease protein MsbA, MAGNESIUM ION, ... 著者 Klein, D.J, Ishchenko, A, Soisson, S, Cheng, R, Hennig, M. 登録日 2024-07-23 公開日 2024-09-04 最終更新日 2024-09-25 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Cerastecin Inhibition of the Lipooligosaccharide Transporter MsbA to Combat Acinetobacter baumannii : From Screening Impurity to In Vivo Efficacy. J.Med.Chem., 67, 2024
9C0D	E.Faecium GroEL 分子名称: Chaperonin GroEL 著者 Watson, E.R, Lander, G.C. 登録日 2024-05-25 公開日 2024-08-07 最終更新日 2024-08-14 実験手法 ELECTRON MICROSCOPY (3.97 Å) 主引用文献 Bis-sulfonamido-2-phenylbenzoxazoles Validate the GroES/EL Chaperone System as a Viable Antibiotic Target. J.Am.Chem.Soc., 146, 2024
9B5C	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - consensus map and model 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, Large ribosomal subunit protein eL40B, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-18 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9LYZ	X-RAY CRYSTALLOGRAPHY OF THE BINDING OF THE BACTERIAL CELL WALL TRISACCHARIDE NAM-NAG-NAM TO LYSOZYME 分子名称: HEN EGG WHITE LYSOZYME, N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid 著者 Kelly, J.A, James, M.N.G. 登録日 1979-12-06 公開日 1980-02-27 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 X-ray crystallography of the binding of the bacterial cell wall trisaccharide NAM-NAG-NAM to lysozyme. Nature, 282, 1979
9B5Q	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - cluster 2 map and model (ATP/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-25 実験手法 ELECTRON MICROSCOPY (2.95 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9B5O	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - Ub(T) class 10 map and model from consensus 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-25 実験手法 ELECTRON MICROSCOPY (3.19 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9B5N	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - Ub(T) class 1 map and model from consensus 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-25 実験手法 ELECTRON MICROSCOPY (3.12 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9B33	Structure of concanavalin A (ConA) dimer from the open-state structure of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to one ConA dimer. Type II interface between GluK2 ligand-binding domain and ConA 分子名称: CALCIUM ION, Concanavalin V, ZINC ION 著者 Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I. 登録日 2024-03-18 公開日 2024-05-22 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (4.07 Å) 主引用文献 Kainate receptor channel opening and gating mechanism. Nature, 630, 2024
9B5U	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - Ub(T) class 1 map and model from cluster 1 (ATP/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-25 実験手法 ELECTRON MICROSCOPY (3.67 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9C4M	Crystal Structure of A. baumannii GuaB dCBS with inhibitor G6 (3826) 分子名称: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase, N-[4-chloro-3-(morpholin-4-yl)phenyl]-N~2~-[3-(hydroxymethyl)quinolin-6-yl]-L-alaninamide 著者 Harris, S.F, Wu, P. 登録日 2024-06-04 公開日 2024-09-18 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Differential effects of inosine monophosphate dehydrogenase (IMPDH/GuaB) inhibition in Acinetobacter baumannii and Escherichia coli. J.Bacteriol., 2024
9F9Y	SARS-CoV-2 BA-2.87.1 Spike ectodomain 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin 著者 Ren, J, Stuart, D.I, Duyvesteyn, H.M.E. 登録日 2024-05-09 公開日 2024-08-21 最終更新日 2024-09-04 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Concerted deletions eliminate a neutralizing supersite in SARS-CoV-2 BA.2.87.1 spike. Structure, 2024

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