PDB: 95574 件ウェブページステータス検索Chemie searchBIRD

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5XJJ	Crystal structure of a MATE family protein 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, multi drug efflux transporter 著者 Tanaka, Y, Tsukazaki, T, Iwaki, S. 登録日 2017-05-02 公開日 2017-09-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Crystal Structure of a Plant Multidrug and Toxic Compound Extrusion Family Protein Structure, 25, 2017
7UB2	Structure of RecT protein from Listeria innoccua phage A118 in complex with 83-mer annealed duplex 分子名称: DNA (49-mer), RecT 著者 Bell, C.E, Caldwell, B.J. 登録日 2022-03-14 公開日 2022-12-07 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of a RecT/Red beta family recombinase in complex with a duplex intermediate of DNA annealing. Nat Commun, 13, 2022
7UBB	Structure of RecT protein from Listeria innoccua phage A118 in complex with 83-mer ssDNA 分子名称: RecT 著者 Bell, C.E, Caldwell, B.J. 登録日 2022-03-14 公開日 2022-12-07 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Structure of a RecT/Red beta family recombinase in complex with a duplex intermediate of DNA annealing. Nat Commun, 13, 2022
7UD6	Designed Enzyme SH3-588 (Catechol O-methyltransferase catalytic domain and Src homology 3 binding domain fusion) 分子名称: POTASSIUM ION, S-ADENOSYL-L-HOMOCYSTEINE, Tyrosine-protein kinase Fyn,Catechol O-methyltransferase 著者 Ongpipattanakul, C, Nair, S.K. 登録日 2022-03-18 公開日 2023-01-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Designer installation of a substrate recruitment domain to tailor enzyme specificity. Nat.Chem.Biol., 19, 2023
7UK6	Apo form of YjfC from Escherichia coli K-12 分子名称: Putative acid--amine ligase YjfC, SULFATE ION 著者 Pederick, J.L, Bruning, J.B. 登録日 2022-03-31 公開日 2023-02-15 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Escherichia coli YgiC and YjfC Possess Peptide─Spermidine Ligase Activity. Biochemistry, 62, 2023
7UK8	Apo form of YgiC from Escherichia coli K-12 分子名称: MAGNESIUM ION, NICKEL (II) ION, Putative acid--amine ligase YgiC, ... 著者 Pederick, J.L, Bruning, J.B. 登録日 2022-03-31 公開日 2023-02-15 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Escherichia coli YgiC and YjfC Possess Peptide─Spermidine Ligase Activity. Biochemistry, 62, 2023
7UK7	YjfC from Escherichia coli K-12 in complex with ADP, Mg2+ and SO4 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative acid--amine ligase YjfC, ... 著者 Pederick, J.L, Bruning, J.B. 登録日 2022-03-31 公開日 2023-02-15 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Escherichia coli YgiC and YjfC Possess Peptide─Spermidine Ligase Activity. Biochemistry, 62, 2023
7UKA	YgiC from Escherichia coli K-12 in complex with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, NICKEL (II) ION, Putative acid--amine ligase YgiC, ... 著者 Pederick, J.L, Bruning, J.B. 登録日 2022-03-31 公開日 2023-02-15 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Escherichia coli YgiC and YjfC Possess Peptide─Spermidine Ligase Activity. Biochemistry, 62, 2023
5XWC	Crystal Structure of Aspergillus niger Glutamate Dehydrogenase Complexed With Alpha-iminoglutarate, 2-amino-2-hydroxyglutarate and NADP 分子名称: (2S)-2-azanyl-2-oxidanyl-pentanedioic acid, (2Z)-2-iminopentanedioic acid, DI(HYDROXYETHYL)ETHER, ... 著者 Prakash, P, Punekar, N.S, Bhaumik, P. 登録日 2017-06-29 公開日 2018-03-21 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structural basis for the catalytic mechanism and alpha-ketoglutarate cooperativity of glutamate dehydrogenase. J. Biol. Chem., 293, 2018
4YV5	Crystal Structure of Myotoxin II from Bothrops moojeni complexed to Suramin 分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, Basic phospholipase A2 homolog 2, ... 著者 Salvador, G.H.M, Fontes, M.R.M. 登録日 2015-03-19 公開日 2015-10-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural and functional evidence for membrane docking and disruption sites on phospholipase A2-like proteins revealed by complexation with the inhibitor suramin. Acta Crystallogr. D Biol. Crystallogr., 71, 2015
4WM5	High pressure protein crystallography of hen egg white lysozyme at 890 MPa 分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION 著者 Yamada, H, Nagae, T, Watanabe, N. 登録日 2014-10-08 公開日 2015-04-08 最終更新日 2020-02-05 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 High-pressure protein crystallography of hen egg-white lysozyme Acta Crystallogr.,Sect.D, 71, 2015
7TPT	Single-particle Cryo-EM structure of Arp2/3 complex at branched-actin junction. 分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... 著者 Ding, B, Narvaez-Ortiz, H.Y, Nolen, B.J, Chowdhury, S. 登録日 2022-01-26 公開日 2022-05-25 最終更新日 2022-06-08 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structure of Arp2/3 complex at a branched actin filament junction resolved by single-particle cryo-electron microscopy. Proc.Natl.Acad.Sci.USA, 119, 2022
8HG5	Cryo-EM structure of the prasinophyte-specific light-harvesting complex (Lhcp)from Ostreococcus tauri 分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (1~{S})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaenyl]cyclohex-3-en-1-ol, (3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-1-[(1~{S},4~{S})-2,2-dimethyl-6-methylidene-1,4-bis(oxidanyl)cyclohexyl]-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaen-2-one, ... 著者 Shan, J, Sheng, X, Ishii, A, Watanabe, A, Song, C, Murata, K, Minagawa, J, Liu, Z. 登録日 2022-11-13 公開日 2023-04-26 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 The photosystem I supercomplex from a primordial green alga Ostreococcus tauri harbors three light-harvesting complex trimers. Elife, 12, 2023
1O3P	Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors 分子名称: 2-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}-6-(CYCLOPENTYLOXY)BENZENOLATE, CITRIC ACID, Urokinase-type plasminogen activator 著者 Katz, B.A, Elrod, K, Verner, E, Mackman, R.L, Luong, C, Shrader, W.D, Sendzik, M, Spencer, J.R, Sprengeler, P.A, Kolesnikov, A, Tai, V.W, Hui, H.C, Breitenbucher, J.G, Allen, D, Janc, J.W. 登録日 2003-03-06 公開日 2003-09-02 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Elaborate manifold of short hydrogen bond arrays mediating binding of active site-directed serine protease inhibitors. J.Mol.Biol., 329, 2003
4X1J	X-ray crystal structure of the dimeric BMP antagonist NBL1 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Neuroblastoma suppressor of tumorigenicity 1 著者 Thompson, T.B, Nolan, K, Kattamuri, C. 登録日 2014-11-24 公開日 2015-01-14 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of Neuroblastoma Suppressor of Tumorigenicity 1 (NBL1): INSIGHTS FOR THE FUNCTIONAL VARIABILITY ACROSS BONE MORPHOGENETIC PROTEIN (BMP) ANTAGONISTS. J.Biol.Chem., 290, 2015
8H5Z	Crystal structure of RadD/ATP analogue complex 分子名称: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Putative DNA repair helicase RadD, ZINC ION 著者 Yan, X.X, Tian, L.F. 登録日 2022-10-14 公開日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.00002718 Å) 主引用文献 Biochemical and Structural Analyses Shed Light on the Mechanisms of RadD DNA Binding and Its ATPase from Escherichia coli. Int J Mol Sci, 24, 2023
4WLD	High pressure protein crystallography of hen egg white lysozyme at 0.1 MPa 分子名称: Lysozyme C, SODIUM ION 著者 Yamada, H, Nagae, T, Watanabe, N. 登録日 2014-10-07 公開日 2015-04-08 最終更新日 2017-09-27 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 High-pressure protein crystallography of hen egg-white lysozyme Acta Crystallogr.,Sect.D, 71, 2015
8SNJ	Crystal Structure of ArnB Transferase from Klebsiella aerogenes (Lattice Translocation Disorder, P1 form) 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PYRIDOXAL-5'-PHOSPHATE, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2023-04-27 公開日 2023-05-10 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal Structure of ArnB Transferase from Klebsiella aerogenes (Lattice Translocation Disorder, P1 form) To be published
8SNG	Crystal Structure of ArnB Transferase from Klebsiella aerogenes (Lattice Translocation Disorder, P21 form) 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ETHANOL, MAGNESIUM ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2023-04-27 公開日 2023-05-10 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal Structure of ArnB Transferase from Klebsiella aerogenes (Lattice Translocation Disorder, P21 form) To be published
4N7N	Capturing the haemoglobin allosteric transition in a single crystal form; Crystal structure of full-liganded human haemoglobin with phosphate at 2.75 A resolution. 分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE 著者 Sugiyama, K, Shibayama, N, Park, S.Y. 登録日 2013-10-16 公開日 2014-04-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.754 Å) 主引用文献 Capturing the hemoglobin allosteric transition in a single crystal form J.Am.Chem.Soc., 136, 2014
6XN7	Structure of the Lactococcus lactis Csm NTR CRISPR-Cas Complex 分子名称: CRISPR-associated protein Cas10, CRISPR-associated protein Csm2, CRISPR-associated protein Csm3, ... 著者 Rai, J, Sridhara, S, Li, H. 登録日 2020-07-02 公開日 2022-01-12 最終更新日 2022-04-13 実験手法 ELECTRON MICROSCOPY (3.47 Å) 主引用文献 Structural and biochemical characterization of in vivo assembled Lactococcus lactis CRISPR-Csm complex. Commun Biol, 5, 2022
6XRY	Intrinsically disordered bacterial polar organizing protein Z, PopZ, interacts with protein binding partners through an N-terminal Molecular Recognition Feature 分子名称: Polar organizing protein Z 著者 Nordyke, C.T, Ahmed, Y.M, Puterbaugh, R.Z, Bowman, G.R, Varga, K. 登録日 2020-07-14 公開日 2020-11-04 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Intrinsically Disordered Bacterial Polar Organizing Protein Z, PopZ, Interacts with Protein Binding Partners Through an N-terminal Molecular Recognition Feature. J.Mol.Biol., 432, 2020
6XD9	Carbonmonoxy hemoglobin in complex with the antisickling agent 2-hydroxy-6-((6-(hydroxymethyl)pyridin-2-yl)methoxy)benzaldehyde (VZHE039) 分子名称: 3-{[6-(hydroxymethyl)pyridin-2-yl]methoxy}-2-methylphenol, CARBON MONOXIDE, Hemoglobin subunit alpha, ... 著者 Pagare, P.P, Safo, M.K, Musayev, F.N. 登録日 2020-06-10 公開日 2020-12-23 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 VZHE-039, a novel antisickling agent that prevents erythrocyte sickling under both hypoxic and anoxic conditions. Sci Rep, 10, 2020
4WLX	High pressure protein crystallography of hen egg white lysozyme at 280 MPa 分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION 著者 Yamada, H, Nagae, T, Watanabe, N. 登録日 2014-10-08 公開日 2015-04-08 最終更新日 2020-02-05 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 High-pressure protein crystallography of hen egg-white lysozyme Acta Crystallogr.,Sect.D, 71, 2015
4WM3	High pressure protein crystallography of hen egg white lysozyme at 710 MPa 分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION 著者 Yamada, H, Nagae, T, Watanabe, N. 登録日 2014-10-08 公開日 2015-04-08 最終更新日 2020-02-05 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 High-pressure protein crystallography of hen egg-white lysozyme Acta Crystallogr.,Sect.D, 71, 2015

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