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3B7W
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Crystal structure of human acyl-CoA synthetase medium-chain family member 2A, with L64P mutation
分子名称: Acyl-coenzyme A synthetase ACSM2A, mitochondrial precursor, CHLORIDE ION, ...
著者Pilka, E.S, Kochan, G.T, Pike, A.C.W, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Oppermann, U, Structural Genomics Consortium (SGC)
登録日2007-10-31
公開日2007-11-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural snapshots for the conformation-dependent catalysis by human medium-chain acyl-coenzyme A synthetase ACSM2A.
J.Mol.Biol., 388, 2009
2ABZ
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Crystal structure of C19A/C43A mutant of leech carboxypeptidase inhibitor in complex with bovine carboxypeptidase A
分子名称: Carboxypeptidase A1, Metallocarboxypeptidase inhibitor, ZINC ION
著者Arolas, J.L, Popowicz, G.M, Bronsoms, S, Aviles, F.X, Huber, R, Holak, T.A, Ventura, S.
登録日2005-07-18
公開日2006-01-31
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Study of a major intermediate in the oxidative folding of leech carboxypeptidase inhibitor: contribution of the fourth disulfide bond
J.Mol.Biol., 352, 2005
1AVF
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ACTIVATION INTERMEDIATE 2 OF HUMAN GASTRICSIN FROM HUMAN STOMACH
分子名称: GASTRICSIN, SODIUM ION
著者Khan, A.R, Cherney, M.M, Tarasova, N.I, James, M.N.G.
登録日1997-09-16
公開日1998-02-25
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Structural characterization of activation 'intermediate 2' on the pathway to human gastricsin.
Nat.Struct.Biol., 4, 1997
1CGZ
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BU of 1cgz by Molmil
CHALCONE SYNTHASE FROM ALFALFA COMPLEXED WITH RESVERATROL
分子名称: PROTEIN (CHALCONE SYNTHASE), RESVERATROL
著者Ferrer, J.-L, Jez, J, Bowman, M.E, Dixon, R, Noel, J.P.
登録日1999-03-26
公開日1999-08-18
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of chalcone synthase and the molecular basis of plant polyketide biosynthesis.
Nat.Struct.Biol., 6, 1999
4U92
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BU of 4u92 by Molmil
Crystal structure of a DNA/Ba2+ G-quadruplex containing a water-mediated C-tetrad
分子名称: BARIUM ION, DNA (5'-D(*CP*CP*AP*KP*GP*CP*GP*TP*GP*G)-3'), MAGNESIUM ION
著者Paukstelis, P.J, Zhang, D, Huang, T, Lukeman, P.
登録日2014-08-05
公開日2014-11-26
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of a DNA/Ba2+ G-quadruplex containing a water-mediated C-tetrad.
Nucleic Acids Res., 42, 2014
1O0A
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BU of 1o0a by Molmil
BACTERIORHODOPSIN L INTERMEDIATE AT 1.62 A RESOLUTION
分子名称: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, Bacteriorhodopsin, ...
著者Lanyi, J.K.
登録日2003-02-20
公開日2003-04-22
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Mechanism of proton transport in bacteriorhodopsin from crystallographic structures of the K, L, M1, M2, and M2' intermediates of the photocycle.
J.Mol.Biol., 328, 2003
8FYI
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BU of 8fyi by Molmil
Structure of HIV-1 BG505 SOSIP-HT1 in complex with one CD4 molecule
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(6-8)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Fan, C, Dam, K.A, Bjorkman, P.J.
登録日2023-01-26
公開日2023-10-18
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Intermediate conformations of CD4-bound HIV-1 Env heterotrimers.
Nature, 623, 2023
8FYJ
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Structure of HIV-1 BG505 SOSIP-HT2 in complex with two CD4 molecules (class I)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
著者Fan, C, Dam, K.A, Bjorkman, P.J.
登録日2023-01-26
公開日2023-10-18
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Intermediate conformations of CD4-bound HIV-1 Env heterotrimers.
Nature, 623, 2023
6BDY
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BU of 6bdy by Molmil
Crystal Structure of the MetH Reactivation Domain bound to Sinefungin
分子名称: Methionine synthase, SINEFUNGIN
著者Fick, R.J, Vander Lee, L.P, Trievel, R.C.
登録日2017-10-24
公開日2018-05-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.512 Å)
主引用文献Water-Mediated Carbon-Oxygen Hydrogen Bonding Facilitates S-Adenosylmethionine Recognition in the Reactivation Domain of Cobalamin-Dependent Methionine Synthase.
Biochemistry, 57, 2018
3XIS
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A METAL-MEDIATED HYDRIDE SHIFT MECHANISM FOR XYLOSE ISOMERASE BASED ON THE 1.6 ANGSTROMS STREPTOMYCES RUBIGINOSUS STRUCTURES WITH XYLITOL AND D-XYLOSE
分子名称: D-xylose, MAGNESIUM ION, XYLOSE ISOMERASE, ...
著者Whitlow, M, Howard, A.J.
登録日1991-03-25
公開日1992-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A metal-mediated hydride shift mechanism for xylose isomerase based on the 1.6 A Streptomyces rubiginosus structures with xylitol and D-xylose.
Proteins, 9, 1991
8DWI
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BU of 8dwi by Molmil
Molecular Mechanism of Sialic Acid Transport Mediated by Sialin
分子名称: Sialin
著者Hu, W, Zheng, H.
登録日2022-08-01
公開日2023-01-25
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The molecular mechanism of sialic acid transport mediated by Sialin.
Sci Adv, 9, 2023
6BM6
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BU of 6bm6 by Molmil
Crystal Structure of the MetH Reactivation Domain bound to AdoHcy
分子名称: Methionine synthase, S-ADENOSYL-L-HOMOCYSTEINE
著者Fick, R.J, Vander Lee, L.P, Trievel, R.C.
登録日2017-11-13
公開日2018-05-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.504 Å)
主引用文献Water-Mediated Carbon-Oxygen Hydrogen Bonding Facilitates S-Adenosylmethionine Recognition in the Reactivation Domain of Cobalamin-Dependent Methionine Synthase.
Biochemistry, 57, 2018
6BM5
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Crystal Structure of the MetH Reactivation Domain bound to AdoMet
分子名称: Methionine synthase, S-ADENOSYLMETHIONINE
著者Fick, R.J, Vander Lee, L.P, Trievel, R.C.
登録日2017-11-13
公開日2018-05-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Water-Mediated Carbon-Oxygen Hydrogen Bonding Facilitates S-Adenosylmethionine Recognition in the Reactivation Domain of Cobalamin-Dependent Methionine Synthase.
Biochemistry, 57, 2018
3DAY
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BU of 3day by Molmil
Crystal structure of human acyl-CoA synthetase medium-chain family member 2A (L64P mutation) in complex with AMP-CPP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Acyl-coenzyme A synthetase ACSM2A, mitochondrial precursor, ...
著者Pilka, E.S, Kochan, G.T, Yue, W.W, Bhatia, C, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Wikstrom, M, Bountra, C, Oppermann, U, Structural Genomics Consortium (SGC)
登録日2008-05-30
公開日2008-07-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural snapshots for the conformation-dependent catalysis by human medium-chain acyl-coenzyme A synthetase ACSM2A.
J.Mol.Biol., 388, 2009
1POV
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ROLE AND MECHANISM OF THE MATURATION CLEAVAGE OF VP0 IN POLIOVIRUS ASSEMBLY: STRUCTURE OF THE EMPTY CAPSID ASSEMBLY INTERMEDIATE AT 2.9 ANGSTROMS RESOLUTION
分子名称: MYRISTIC ACID, POLIOVIRUS NATIVE EMPTY CAPSID (TYPE 1), SPHINGOSINE
著者Basavappa, R, Filman, D.J, Hogle, J.M.
登録日1995-08-10
公開日1995-12-07
最終更新日2023-04-19
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Role and mechanism of the maturation cleavage of VP0 in poliovirus assembly: structure of the empty capsid assembly intermediate at 2.9 A resolution.
Protein Sci., 3, 1994
2XIS
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BU of 2xis by Molmil
A METAL-MEDIATED HYDRIDE SHIFT MECHANISM FOR XYLOSE ISOMERASE BASED ON THE 1.6 ANGSTROMS STREPTOMYCES RUBIGINOSUS STRUCTURES WITH XYLITOL AND D-XYLOSE
分子名称: MAGNESIUM ION, XYLOSE ISOMERASE, Xylitol
著者Whitlow, M, Howard, A.J.
登録日1991-03-25
公開日1992-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献A metal-mediated hydride shift mechanism for xylose isomerase based on the 1.6 A Streptomyces rubiginosus structures with xylitol and D-xylose.
Proteins, 9, 1991
6KH9
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BU of 6kh9 by Molmil
Solution structure of bovine insulin amyloid intermediate-1
分子名称: Insulin A chain, Insulin B chain
著者Ratha, B.N, Kar, R.K, Brender, J.B, Bhunia, A.
登録日2019-07-14
公開日2020-08-12
最終更新日2020-11-18
実験手法SOLUTION NMR
主引用文献High-resolution structure of a partially folded insulin aggregation intermediate.
Proteins, 88, 2020
3Q35
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Structure of the Rtt109-AcCoA/Vps75 complex and implications for chaperone-mediated histone acetylation
分子名称: 1,2-ETHANEDIOL, ACETYL COENZYME *A, Histone acetyltransferase, ...
著者Tang, Y, Yuan, H, Meeth, K, Marmorstein, R.
登録日2010-12-21
公開日2011-02-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of the Rtt109-AcCoA/Vps75 Complex and Implications for Chaperone-Mediated Histone Acetylation.
Structure, 19, 2011
1QU6
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STRUCTURE OF THE DOUBLE-STRANDED RNA-BINDING DOMAIN OF THE PROTEIN KINASE PKR REVEALS THE MOLECULAR BASIS OF ITS DSRNA-MEDIATED ACTIVATION
分子名称: PROTEIN KINASE PKR
著者Nanduri, S, Carpick, B.W, Yang, Y, Williams, B.R.G, Qin, J.
登録日1999-07-08
公開日1999-12-23
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure of the double-stranded RNA-binding domain of the protein kinase PKR reveals the molecular basis of its dsRNA-mediated activation.
EMBO J., 17, 1998
8XUV
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BU of 8xuv by Molmil
Cryo-EM structure of tomato NRC2 filament
分子名称: ADENOSINE-5'-DIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, NRC2
著者Sun, Y, Ma, S.C, Chai, J.J.
登録日2024-01-14
公開日2024-05-22
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Oligomerization-mediated autoinhibition and cofactor binding of a plant NLR.
Nature, 2024
8XUQ
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Cryo-EM structure of tomato NRC2 tetramer
分子名称: ADENOSINE-5'-DIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, NRC2
著者Sun, Y, Ma, S.C, Chai, J.J.
登録日2024-01-14
公開日2024-05-22
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Oligomerization-mediated autoinhibition and cofactor binding of a plant NLR.
Nature, 2024
2R91
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Crystal Structure of KD(P)GA from T.tenax
分子名称: 2-Keto-3-deoxy-(6-phospho-)gluconate aldolase, SULFATE ION
著者Pauluhn, A, Pohl, E, Lorentzen, E, Siebers, B, Ahmed, H, Buchinger, S, Schomburg, D.
登録日2007-09-12
公開日2008-03-18
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and stereochemical studies of KD(P)G aldolase from Thermoproteus tenax.
Proteins, 72, 2008
8XUO
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Cryo-EM structure of tomato NRC2 dimer
分子名称: ADENOSINE-5'-DIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, NRC2
著者Sun, Y, Ma, S.C, Chai, J.J.
登録日2024-01-13
公開日2024-05-22
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Oligomerization-mediated autoinhibition and cofactor binding of a plant NLR.
Nature, 2024
1P8H
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BACTERIORHODOPSIN M1 INTERMEDIATE PRODUCED AT ROOM TEMPERATURE
分子名称: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, Bacteriorhodopsin, ...
著者Lanyi, J.K.
登録日2003-05-07
公開日2003-07-07
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Crystallographic Structures of the M and N Intermediates of Bacteriorhodopsin: Assembly of a Hydrogen-Bonded Chain of Water Molecules between Asp-96 and the Retinal Schiff Base
J.Mol.Biol., 330, 2003
1W8S
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The mechanism of the Schiff Base Forming Fructose-1,6-bisphosphate Aldolase: Structural analysis of reaction intermediates
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS I
著者Lorentzen, E, Hensel, R, Siebers, B, Pohl, E.
登録日2004-09-27
公開日2005-03-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mechanism of the Schiff base forming fructose-1,6-bisphosphate aldolase: structural analysis of reaction intermediates.
Biochemistry, 44, 2005

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