Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DG8
DownloadVisualize
BU of 6dg8 by Molmil
Full-length 5-HT3A receptor in a serotonin-bound conformation- State 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-hydroxytryptamine receptor 3A, SEROTONIN, ...
著者Basak, S, Chakrapani, S.
登録日2018-05-17
公開日2018-11-07
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Cryo-EM reveals two distinct serotonin-bound conformations of full-length 5-HT3Areceptor.
Nature, 563, 2018
6D3U
DownloadVisualize
BU of 6d3u by Molmil
Complex structure of Ulvan lyase from Nonlaben Ulvanivorans- NLR48
分子名称: 1,2-ETHANEDIOL, 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-3-O-sulfo-alpha-L-rhamnopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-3-O-sulfo-alpha-L-rhamnopyranose, CALCIUM ION, ...
著者Ulaganathan, T, Cygler, M.
登録日2018-04-16
公開日2018-06-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structural and functional characterization of PL28 family ulvan lyase NLR48 fromNonlabens ulvanivorans.
J. Biol. Chem., 293, 2018
3UJ8
DownloadVisualize
BU of 3uj8 by Molmil
Phosphoethanolamine methyltransferase from Plasmodium falciparum in complex with sinefungin and PO4
分子名称: PHOSPHATE ION, Phosphoethanolamine N-methyltransferase, SINEFUNGIN
著者Lee, S.G, Kim, Y, Alpert, T.D, Nagata, A, Jez, J.M.
登録日2011-11-07
公開日2011-11-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.351 Å)
主引用文献Structure and reaction mechanism of phosphoethanolamine methyltransferase from the malaria parasite Plasmodium falciparum: an antiparasitic drug target.
J.Biol.Chem., 287, 2012
4OF3
DownloadVisualize
BU of 4of3 by Molmil
Crystal Structure of SYG-1 D1-D2, Glycosylated
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Protein SYG-1, isoform b, ...
著者Ozkan, E, Garcia, K.C.
登録日2014-01-14
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis.
Cell(Cambridge,Mass.), 156, 2014
3UJC
DownloadVisualize
BU of 3ujc by Molmil
Phosphoethanolamine methyltransferase mutant (H132A) from Plasmodium falciparum in complex with phosphocholine
分子名称: PHOSPHOCHOLINE, Phosphoethanolamine N-methyltransferase
著者Lee, S.G, Kim, Y, Alpert, T.D, Nagata, A, Jez, J.M.
登録日2011-11-07
公開日2011-11-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Structure and reaction mechanism of phosphoethanolamine methyltransferase from the malaria parasite Plasmodium falciparum: an antiparasitic drug target.
J.Biol.Chem., 287, 2012
6DG7
DownloadVisualize
BU of 6dg7 by Molmil
Full-length 5-HT3A receptor in a serotonin-bound conformation- State 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-hydroxytryptamine receptor 3A, SEROTONIN, ...
著者Basak, S, Chakrapani, S.
登録日2018-05-17
公開日2018-11-07
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Cryo-EM reveals two distinct serotonin-bound conformations of full-length 5-HT3Areceptor.
Nature, 563, 2018
8DWR
DownloadVisualize
BU of 8dwr by Molmil
Crystal structure of the L333V variant of catalase-peroxidase from Mycobacterium tuberculosis
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Catalase-peroxidase, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Diaz-Vilchis, A, Uribe-Vazquez, B, Avila-Linares, A, Rudino-Pinera, E, Soberon, X.
登録日2022-08-01
公開日2023-08-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Characterization of a catalase-peroxidase variant (L333V-KatG) identified in an INH-resistant Mycobacterium tuberculosis clinical isolate.
Biochem Biophys Rep, 37, 2024
6LAW
DownloadVisualize
BU of 6law by Molmil
MicroED structure of proteinase K at 1.50A determained using crystal lamellas prepared by focused ion beam milling
分子名称: Proteinase K, SULFATE ION
著者Zhou, H, Luo, Z, Li, X.
登録日2019-11-13
公開日2019-12-04
実験手法ELECTRON CRYSTALLOGRAPHY (1.5 Å)
主引用文献Using focus ion beam to prepare crystal lamella for electron diffraction.
J. Struct. Biol., 205, 2019
4V9H
DownloadVisualize
BU of 4v9h by Molmil
Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Tourigny, D.S, Fernandez, I.S, Kelley, A.C, Ramakrishnan, V.
登録日2013-03-25
公開日2014-07-09
最終更新日2014-12-10
実験手法X-RAY DIFFRACTION (2.857 Å)
主引用文献Elongation factor G bound to the ribosome in an intermediate state of translocation.
Science, 340, 2013
4V9R
DownloadVisualize
BU of 4v9r by Molmil
Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ...
著者Bulkley, D.P, Brandi, L, Polikanov, Y.S, Fabbretti, A, O'Connor, M, Gualerzi, C.O, Steitz, T.A.
登録日2013-12-05
公開日2014-07-09
最終更新日2014-12-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The antibiotics dityromycin and GE82832 bind protein S12 and block EF-G-catalyzed translocation.
Cell Rep, 6, 2014
7LWH
DownloadVisualize
BU of 7lwh by Molmil
Human neurofibromin 2/merlin residues 1-339 in complex with LATS1
分子名称: GLYCEROL, IMIDAZOLE, Merlin, ...
著者Primi, M.C, Rangarajan, E.S, Izard, T.
登録日2021-03-01
公開日2021-08-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.606 Å)
主引用文献Conformational flexibility determines the Nf2/merlin tumor suppressor functions.
Matrix Biol Plus, 12, 2021
7LMI
DownloadVisualize
BU of 7lmi by Molmil
SARS-CoV-1 3CLPro in complex with N-(4-(1H-pyrazol-4-yl)phenyl)-2-(1H-benzo[d][1,2,3]triazol-1-yl)-N-(thiophen-3-ylmethyl)acetamide
分子名称: 2-(benzotriazol-1-yl)-~{N}-[4-(1~{H}-pyrazol-4-yl)phenyl]-~{N}-(thiophen-3-ylmethyl)ethanamide, 3C-like proteinase, GLYCEROL
著者Arya, T, Goins, C.M, Macdonald, J.D, Stauffer, S.R.
登録日2021-02-05
公開日2021-08-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.707 Å)
主引用文献Structure-Based Optimization of ML300-Derived, Noncovalent Inhibitors Targeting the Severe Acute Respiratory Syndrome Coronavirus 3CL Protease (SARS-CoV-2 3CL pro ).
J.Med.Chem., 65, 2022
7LDG
DownloadVisualize
BU of 7ldg by Molmil
Crystal structure of the MEILB2-BRCA2 complex
分子名称: Breast cancer type 2 susceptibility protein, Heat shock factor 2-binding protein
著者Nandakumar, J, Pendlebury, D.F.
登録日2021-01-13
公開日2021-08-11
最終更新日2021-08-25
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Structure of a meiosis-specific complex central to BRCA2 localization at recombination sites.
Nat.Struct.Mol.Biol., 28, 2021
7LMD
DownloadVisualize
BU of 7lmd by Molmil
SARS-CoV-2 3CLPro in complex with 2-(benzotriazol-1-yl)-N-[4-(1H-pyrazol-4-yl)phenyl]-N-(3-thienylmethyl)acetamide
分子名称: 2-(benzotriazol-1-yl)-~{N}-[4-(1~{H}-pyrazol-4-yl)phenyl]-~{N}-(thiophen-3-ylmethyl)ethanamide, 3C-like proteinase
著者Goins, C.M, Arya, T, Macdonald, J.D, Stauffer, S.R.
登録日2021-02-05
公開日2021-08-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structure-Based Optimization of ML300-Derived, Noncovalent Inhibitors Targeting the Severe Acute Respiratory Syndrome Coronavirus 3CL Protease (SARS-CoV-2 3CL pro ).
J.Med.Chem., 65, 2022
7LGM
DownloadVisualize
BU of 7lgm by Molmil
Cyanophycin synthetase from A. baylyi DSM587 with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cyanophycin synthase
著者Sharon, I, Haque, A.S, Lahiri, I, Leschziner, A, Schmeing, T.M.
登録日2021-01-20
公開日2021-08-18
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structures and function of the amino acid polymerase cyanophycin synthetase.
Nat.Chem.Biol., 17, 2021
7LRG
DownloadVisualize
BU of 7lrg by Molmil
Filamentous actin decorated with human cardiac myosin binding protein C C2 domain
分子名称: Actin, alpha cardiac muscle 1, Myosin-binding protein C, ...
著者Galkin, V.E.
登録日2021-02-16
公開日2021-08-11
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献Interaction of the C2 Ig-like Domain of Cardiac Myosin Binding Protein-C with F-actin.
J.Mol.Biol., 433, 2021
7LG5
DownloadVisualize
BU of 7lg5 by Molmil
Synechocystis sp. UTEX2470 Cyanophycin synthetase 1 with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cyanophycin synthase, MAGNESIUM ION
著者Sharon, I, Schmeing, T.M.
登録日2021-01-19
公開日2021-08-18
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献Structures and function of the amino acid polymerase cyanophycin synthetase.
Nat.Chem.Biol., 17, 2021
7LME
DownloadVisualize
BU of 7lme by Molmil
SARS-CoV-2 3CLPro in complex with N-[4-[[2-(benzotriazol-1-yl)acetyl]-(3-thienylmethyl)amino]phenyl]cyclopropanecarboxamide
分子名称: 3C-like proteinase, ~{N}-[4-[2-(benzotriazol-1-yl)ethanoyl-(thiophen-3-ylmethyl)amino]phenyl]cyclopropanecarboxamide
著者Goins, C.M, Arya, T, Macdonald, J.D, Stauffer, S.R.
登録日2021-02-05
公開日2021-08-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-Based Optimization of ML300-Derived, Noncovalent Inhibitors Targeting the Severe Acute Respiratory Syndrome Coronavirus 3CL Protease (SARS-CoV-2 3CL pro ).
J.Med.Chem., 65, 2022
7LHP
DownloadVisualize
BU of 7lhp by Molmil
Crystal Structure of EcDsbA in a complex with methyl 2-(6-bromo-2-phenylbenzofuran-3-yl)acetate
分子名称: (6-bromo-2-phenyl-1-benzofuran-3-yl)acetic acid, COPPER (II) ION, Thiol:disulfide interchange protein DsbA
著者Ilyichova, O.V, Scanlon, M.J.
登録日2021-01-26
公開日2021-08-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Elaboration of a benzofuran scaffold and evaluation of binding affinity and inhibition of Escherichia coli DsbA: A fragment-based drug design approach to novel antivirulence compounds.
Bioorg.Med.Chem., 45, 2021
7LHV
DownloadVisualize
BU of 7lhv by Molmil
Structure of Arabidopsis thaliana sulfate transporter AtSULTR4;1
分子名称: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, SULFATE ION, ...
著者Wang, L, Chen, K, Zhou, M.
登録日2021-01-26
公開日2021-08-11
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Structure and function of an Arabidopsis thaliana sulfate transporter.
Nat Commun, 12, 2021
7LKQ
DownloadVisualize
BU of 7lkq by Molmil
The PilZ(delta107-117)-FimX(GGDEF-EAL) complex from Xanthomonas citri
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), FimX(GGDEF-EAL), MAGNESIUM ION, ...
著者Llontop, E.E, Guzzo, C.R, Farah, C.S.
登録日2021-02-02
公開日2021-08-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021
7LKO
DownloadVisualize
BU of 7lko by Molmil
The PilB(N-terminal)-PilZ complex of the Type IV pilus from Xanthomonas citri (2.9 A)
分子名称: Pilus biogenesis protein, SULFATE ION, Type IV fimbriae assembly protein
著者Llontop, E.E, Guzzo, C.R, Farah, C.S.
登録日2021-02-02
公開日2021-08-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021
7LMH
DownloadVisualize
BU of 7lmh by Molmil
SARS-CoV-1 3CLPro in complex with 2-(1H-benzo[d][1,2,3]triazol-1-yl)-N-(4-(pyridin-3-yl)phenyl)-N-(thiophen-3-ylmethyl)acetamide
分子名称: 2-(benzotriazol-1-yl)-~{N}-(4-pyridin-3-ylphenyl)-~{N}-(thiophen-3-ylmethyl)ethanamide, 3C-like proteinase, GLYCEROL
著者Arya, T, Goins, C.M, Macdonald, J.D, Stauffer, S.R.
登録日2021-02-05
公開日2021-08-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure-Based Optimization of ML300-Derived, Noncovalent Inhibitors Targeting the Severe Acute Respiratory Syndrome Coronavirus 3CL Protease (SARS-CoV-2 3CL pro ).
J.Med.Chem., 65, 2022
7LMJ
DownloadVisualize
BU of 7lmj by Molmil
SARS-CoV-1 3CLPro in complex with 2-(1H-benzo[d][1,2,3]triazol-1-yl)-N-(3-chlorobenzyl)-N-(4-(2-oxo-1,2-dihydropyridin-3-yl)phenyl)acetamide
分子名称: 2-(benzotriazol-1-yl)-~{N}-[(3-chlorophenyl)methyl]-~{N}-[4-(2-oxidanylidene-1~{H}-pyridin-3-yl)phenyl]ethanamide, 3C-like proteinase, DI(HYDROXYETHYL)ETHER, ...
著者Arya, T, Goins, C.M, Macdonald, J.D, Stauffer, S.R.
登録日2021-02-05
公開日2021-08-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.686 Å)
主引用文献Structure-Based Optimization of ML300-Derived, Noncovalent Inhibitors Targeting the Severe Acute Respiratory Syndrome Coronavirus 3CL Protease (SARS-CoV-2 3CL pro ).
J.Med.Chem., 65, 2022
7LKN
DownloadVisualize
BU of 7lkn by Molmil
The PilB(N-terminal_P70S mutant)-PilZ complex (SeMet)
分子名称: Pilus biogenesis protein, SULFATE ION, Type IV fimbriae assembly protein
著者Llontop, E.E, Guzzo, C.R, Farah, C.S.
登録日2021-02-02
公開日2021-08-11
最終更新日2021-09-01
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
Plos Pathog., 17, 2021

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon