Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5LAY
DownloadVisualize
BU of 5lay by Molmil
Discovery of New Natural-product-inspired Spiro-oxindole Compounds as Orally Active Inhibitors of the MDM2-p53 Interaction: HDM2 (MDM2) IN COMPLEX WITH COMPOUND 6g
分子名称: (3~{S},3'~{S},4'~{S},5'~{S})-4'-azanyl-6-chloranyl-3'-(3-chloranyl-2-fluoranyl-phenyl)-1'-[(3-ethoxyphenyl)methyl]-5'-methyl-spiro[1~{H}-indole-3,2'-pyrrolidine]-2-one, E3 ubiquitin-protein ligase Mdm2, GLYCEROL, ...
著者Kessler, D, Gollner, A.
登録日2016-06-15
公開日2016-11-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Discovery of Novel Spiro[3H-indole-3,2'-pyrrolidin]-2(1H)-one Compounds as Chemically Stable and Orally Active Inhibitors of the MDM2-p53 Interaction.
J. Med. Chem., 59, 2016
6WI5
DownloadVisualize
BU of 6wi5 by Molmil
De novo designed protein Foldit4
分子名称: De novo designed protein Foldit4
著者Bera, A.K, Koepnick, B, Boykov, A, Baker, D.
登録日2020-04-08
公開日2020-04-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献De novo design of protein logic gates.
Science, 368, 2020
6WQY
DownloadVisualize
BU of 6wqy by Molmil
GH5-4 broad specificity endoglucanase from Bacteroides salanitronis
分子名称: CHLORIDE ION, Cellulase, MAGNESIUM ION
著者Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-04-29
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
8HTR
DownloadVisualize
BU of 8htr by Molmil
Crystal structure of Bcl2 in complex with S-9c
分子名称: 4-[4-[(2~{S})-2-(2-chlorophenyl)pyrrolidin-1-yl]phenyl]-~{N}-[3-nitro-4-(oxan-4-ylmethylamino)phenyl]sulfonyl-2-(1~{H}-pyrrolo[2,3-b]pyridin-5-yloxy)benzamide, Apoptosis regulator Bcl-2
著者Liu, J, Xu, M, Feng, Y, Liu, Y.
登録日2022-12-21
公開日2024-05-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Discovery of the Clinical Candidate Sonrotoclax (BGB-11417), a Highly Potent and Selective Inhibitor for Both WT and G101V Mutant Bcl-2.
J.Med.Chem., 67, 2024
6QRZ
DownloadVisualize
BU of 6qrz by Molmil
Crystal structure of R2-like ligand-binding oxidase from Sulfolobus acidocaldarius solved by 3D micro-crystal electron diffraction
分子名称: FE (III) ION, MANGANESE (III) ION, Ribonucleoside-diphosphate reductase
著者Xu, H, Lebrette, H, Clabbers, M.T.B, Zhao, J, Griese, J.J, Zou, X, Hogbom, M.
登録日2019-02-20
公開日2019-04-24
最終更新日2024-05-15
実験手法ELECTRON CRYSTALLOGRAPHY (3 Å)
主引用文献Solving a new R2lox protein structure by microcrystal electron diffraction.
Sci Adv, 5, 2019
8HTS
DownloadVisualize
BU of 8hts by Molmil
Crystal structure of Bcl2 in complex with S-10r
分子名称: 4-[2-[(2~{S})-2-(2-cyclopropylphenyl)pyrrolidin-1-yl]-7-azaspiro[3.5]nonan-7-yl]-~{N}-[3-nitro-4-(oxan-4-ylmethylamino)phenyl]sulfonyl-2-(1~{H}-pyrrolo[2,3-b]pyridin-5-yloxy)benzamide, Apoptosis regulator Bcl-2
著者Liu, J, Xu, M, Feng, Y, Liu, Y.
登録日2022-12-21
公開日2024-05-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Discovery of the Clinical Candidate Sonrotoclax (BGB-11417), a Highly Potent and Selective Inhibitor for Both WT and G101V Mutant Bcl-2.
J.Med.Chem., 67, 2024
4KJO
DownloadVisualize
BU of 4kjo by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36A/V66T/V99T at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Caro, J.A, Schlessman, J.L, Garcia-Moreno E, B.
登録日2013-05-03
公開日2013-05-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Cavities in proteins
To be Published
3LWR
DownloadVisualize
BU of 3lwr by Molmil
Structure of H/ACA RNP bound to a substrate RNA containing 4SU
分子名称: 5'-R(*GP*AP*GP*CP*GP*(4SU)P*GP*CP*GP*GP*UP*UP*U)-3', 50S ribosomal protein L7Ae, H/ACA RNA, ...
著者Zhou, J, Liang, B, Lv, C, Yang, W, Li, H.
登録日2010-02-24
公開日2010-07-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.203 Å)
主引用文献Functional and Structural Impact of Target Uridine Substitutions on the H/ACA Ribonucleoprotein Particle Pseudouridine Synthase .
Biochemistry, 49, 2010
3LYY
DownloadVisualize
BU of 3lyy by Molmil
Crystal structure of the MucBP domain of the adhesion protein PEPE_0118 from Pediococcus pentosaceus. Northeast Structural Genomics Consortium target id PtR41A
分子名称: Adhesion exoprotein
著者Seetharaman, J, Lew, S, Wang, D, Janjua, H, Cunningham, K, Owens, L, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2010-02-28
公開日2010-04-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the MucBP domain of the adhesion protein PEPE_0118 from Pediococcus pentosaceus. Northeast Structural Genomics Consortium target id PtR41A
To be Published
3LZ9
DownloadVisualize
BU of 3lz9 by Molmil
The Crystal Structure of 5-epi-aristolochene synthase M4 mutant complexed with (2-trans,6-trans)-2-fluorofarnesyl diphosphate
分子名称: (2Z,6E)-2-fluoro-3,7,11-trimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, Aristolochene synthase, MAGNESIUM ION
著者Noel, J.P, Dellas, N, Faraldos, J.A, Zhao, M, Hess Jr, B.A, Smentek, L, Coates, R.M, O'Maille, P.E.
登録日2010-03-01
公開日2010-04-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural elucidation of cisoid and transoid cyclization pathways of a sesquiterpene synthase using 2-fluorofarnesyl diphosphates.
Acs Chem.Biol., 5, 2010
1EMR
DownloadVisualize
BU of 1emr by Molmil
CRYSTAL STRUCTURE OF HUMAN LEUKEMIA INHIBITORY FACTOR (LIF)
分子名称: LEUKEMIA INHIBITORY FACTOR
著者Robinson, R.C, Heath, J.K, Hawkins, N, Samal, B, Jones, E.Y, Betzel, C.
登録日2000-03-17
公開日2001-03-21
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Species Variation in Receptor Binding Site Revealed by the Medium Resolution X-ray Structure of Human Leukemia Inhibitory Factor
to be published
3LWQ
DownloadVisualize
BU of 3lwq by Molmil
Structure of H/ACA RNP bound to a substrate RNA containing 3MU
分子名称: 5'-R(*GP*AP*GP*CP*GP*(UR3)P*GP*CP*GP*GP*UP*UP*U)-3, 50S ribosomal protein L7Ae, H/ACA RNA, ...
著者Zhou, J, Liang, B, Lv, C, Yang, W, Li, H.
登録日2010-02-24
公開日2010-07-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.678 Å)
主引用文献Functional and Structural Impact of Target Uridine Substitutions on the H/ACA Ribonucleoprotein Particle Pseudouridine Synthase .
Biochemistry, 49, 2010
1R4Z
DownloadVisualize
BU of 1r4z by Molmil
Bacillus subtilis lipase A with covalently bound Rc-IPG-phosphonate-inhibitor
分子名称: Lipase, [(4R)-2,2-DIMETHYL-1,3-DIOXOLAN-4-YL]METHYL HYDROGEN HEX-5-ENYLPHOSPHONATE
著者Droege, M.J, Van Pouderoyen, G, Vrenken, T.E, Rueggeberg, C.J, Reetz, M.T, Dijkstra, B.W, Quax, W.J.
登録日2003-10-09
公開日2004-10-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Directed Evolution of Bacillus subtilis Lipase A by Use of Enantiomeric Phosphonate Inhibitors: Crystal Structures and Phage Display Selection
Chembiochem, 7, 2005
4JZ6
DownloadVisualize
BU of 4jz6 by Molmil
Crystal structure of a salicylaldehyde dehydrogenase from Pseudomonas putida G7 complexed with salicylaldehyde
分子名称: 1,2-ETHANEDIOL, SALICYLALDEHYDE, SULFATE ION, ...
著者Coitinho, J.B, Nagem, R.A.P.
登録日2013-04-02
公開日2014-04-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.417 Å)
主引用文献Structural and Kinetic Properties of the Aldehyde Dehydrogenase NahF, a Broad Substrate Specificity Enzyme for Aldehyde Oxidation.
Biochemistry, 55, 2016
1EE7
DownloadVisualize
BU of 1ee7 by Molmil
NMR STRUCTURE OF THE PEPTAIBOL CHRYSOSPERMIN C BOUND TO DPC MICELLES
分子名称: CHRYSOSPERMIN C
著者Anders, R, Ohlenschlager, O, Soskic, V, Wenschuh, H, Heise, B, Brown, L.R.
登録日2000-01-31
公開日2000-05-10
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献The NMR Solution Structure of the Ion Channel Peptaibol Chrysospermin C Bound to Dodecylphosphocholine Micelles.
Eur.J.Biochem., 267, 2000
4AUC
DownloadVisualize
BU of 4auc by Molmil
Bovine chymosin in complex with Pepstatin A
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHYMOSIN, ...
著者Langholm Jensen, J, Navarro Poulsen, J.C, Jacobsen, J, van den Brink, J.M, Qvist, K.B, Larsen, S.
登録日2012-05-16
公開日2013-05-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Structure of Bovine Chymosin in Complex with Pepstatin A
To be Published
4WBO
DownloadVisualize
BU of 4wbo by Molmil
Bovine G Protein Coupled Receptor Kinase 1 in Complex with Amlexanox
分子名称: 2-amino-7-(1-methylethyl)-5-oxo-5H-chromeno[2,3-b]pyridine-3-carboxylic acid, CHLORIDE ION, Rhodopsin kinase
著者Homan, K.T, Tesmer, J.J.G.
登録日2014-09-03
公開日2014-11-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Identification and characterization of amlexanox as a g protein-coupled receptor kinase 5 inhibitor.
Molecules, 19, 2014
4UUR
DownloadVisualize
BU of 4uur by Molmil
Cold-adapted truncated hemoglobin from the Antarctic marine bacterium Pseudoalteromonas haloplanktis TAC125
分子名称: PROTOPORPHYRIN IX CONTAINING FE, PUTATIVE HEMOGLOBIN-LIKE OXYGEN-BINDING PROTEIN
著者Pesce, A, Giordano, D, Riccio, A, Nardini, M, Caldelli, E, Howes, B, Bustamante, J.P, Boechi, L, Estrin, D, di Prisco, G, Smulevich, G, Verde, C, Bolognesi, M.
登録日2014-07-31
公開日2015-06-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structural Flexibility of the Heme Cavity in the Cold-Adapted Truncated Hemoglobin from the Antarctic Marine Bacterium Pseudoalteromonas Haloplanktis Tac125.
FEBS J., 282, 2015
6QTJ
DownloadVisualize
BU of 6qtj by Molmil
Crystal structure of human CDK8/CYCC in complex with BI 919811
分子名称: Cyclin-C, Cyclin-dependent kinase 8, ~{N},~{N}-dimethyl-2-[4-[4-(2,6-naphthyridin-4-yl)phenyl]pyrazol-1-yl]ethanamide
著者Boettcher, J.
登録日2019-02-25
公開日2020-03-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Selective and Potent CDK8/19 Inhibitors Enhance NK-Cell Activity and Promote Tumor Surveillance.
Mol.Cancer Ther., 19, 2020
6X5I
DownloadVisualize
BU of 6x5i by Molmil
Cryo-EM of peptide-like filament of 1-KMe3
分子名称: 1-KMe3 peptide-like fibril
著者Wang, F, Feng, Z, Xu, B, Egelman, E.H.
登録日2020-05-26
公開日2020-06-03
最終更新日2020-08-26
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Artificial Intracellular Filaments.
Cell Rep Phys Sci, 1, 2020
4UZE
DownloadVisualize
BU of 4uze by Molmil
R66A mutant of FAD synthetase from Corynebacterium ammoniagenes
分子名称: PYROPHOSPHATE, RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF, SULFATE ION
著者Martinez-Julvez, M, Herguedas, B, Milagros, M.
登録日2014-09-05
公開日2015-04-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Quaternary Organization in a Bifunctional Prokaryotic Fad Synthetase: Involvement of an Arginine at its Adenylyltransferase Module on the Riboflavin Kinase Activity.
Biochim.Biophys.Acta, 1854, 2015
2AWI
DownloadVisualize
BU of 2awi by Molmil
Structure of PrgX Y153C mutant
分子名称: PrgX
著者Shi, K, Brown, C.K, Gu, Z.Y, Kozlowicz, B.k, Dunny, G.M, Ohlendorf, D.H, Earhart, C.A.
登録日2005-09-01
公開日2005-12-06
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of peptide sex pheromone receptor PrgX and PrgX/pheromone complexes and regulation of conjugation in Enterococcus faecalis.
Proc.Natl.Acad.Sci.Usa, 102, 2005
4BA3
DownloadVisualize
BU of 4ba3 by Molmil
mImp_alphadIBB_A89NLS
分子名称: A89NLS, IMPORTIN SUBUNIT ALPHA-2
著者Chang, C.-W, Counago, R.L.M, Williams, S.J, Boden, M, Kobe, B.
登録日2012-09-11
公開日2013-01-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Rice Importin-Alpha and Structural Basis of its Interaction with Plant-Specific Nuclear Localization Signals.
Plant Cell, 24, 2012
2AO2
DownloadVisualize
BU of 2ao2 by Molmil
The 2.07 Angstrom crystal structure of Mycobacterium tuberculosis chorismate mutase reveals unexpected gene duplication and suggests a role in host-pathogen interactions
分子名称: Chorismate mutase, SULFATE ION, TRYPTOPHAN
著者Qamra, R, Prakash, P, Aruna, B, Hasnain, S.E, Mande, S.C, TB Structural Genomics Consortium (TBSGC)
登録日2005-08-12
公開日2006-06-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献The 2.15 A crystal structure of Mycobacterium tuberculosis chorismate mutase reveals an unexpected gene duplication and suggests a role in host-pathogen interactions.
Biochemistry, 45, 2006
2B4U
DownloadVisualize
BU of 2b4u by Molmil
Structure of the C252S mutant of Selenomonas ruminantium PTP-like phytase
分子名称: CHLORIDE ION, MALONATE ION, SULFATE ION, ...
著者Gruninger, R.J, Selinger, L.B, Mosimann, S.C.
登録日2005-09-26
公開日2006-11-07
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Kinetic and structural analysis of a bacterial protein tyrosine phosphatase-like myo-inositol polyphosphatase.
Protein Sci., 16, 2007

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon