Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6G36
DownloadVisualize
BU of 6g36 by Molmil
Crystal structure of haspin in complex with 5-chlorotubercidin
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5-chlorotubercidin, COBALT (II) ION, ...
著者Heroven, C, Chaikuad, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Knapp, S, Structural Genomics Consortium (SGC)
登録日2018-03-24
公開日2018-04-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Halogen-Aromatic pi Interactions Modulate Inhibitor Residence Times.
Angew. Chem. Int. Ed. Engl., 57, 2018
4A7B
DownloadVisualize
BU of 4a7b by Molmil
MMP13 IN COMPLEX WITH A NOVEL SELECTIVE NON ZINC BINDING INHIBITOR CMPD22
分子名称: ACETOHYDROXAMIC ACID, CALCIUM ION, COLLAGENASE 3, ...
著者Hargreaves, D, Gerhardt, S.
登録日2011-11-11
公開日2011-12-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Lead Optimisation of Selective Non-Zinc Binding Inhibitors of Mmp13. Part 2.
Bioorg.Med.Chem.Lett., 22, 2012
464D
DownloadVisualize
BU of 464d by Molmil
DISORDER AND TWIN REFINEMENT OF RNA HEPTAMER DOUBLE HELIX
分子名称: RNA (5'-R(*GP*GP*GP*GP*CP*(IU)P*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3'), SODIUM ION, ...
著者Mueller, U, Muller, Y.A, Herbst-Irmer, R, Sprinzl, M, Heinemann, U.
登録日1999-04-14
公開日1999-08-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Disorder and twin refinement of RNA heptamer double helices.
Acta Crystallogr.,Sect.D, 55, 1999
3UMC
DownloadVisualize
BU of 3umc by Molmil
Crystal Structure of the L-2-Haloacid Dehalogenase PA0810
分子名称: CHLORIDE ION, SODIUM ION, haloacid dehalogenase
著者Petit, P, Chan, P.W.Y, Savchenko, A, Yakunin, A.F, Edwards, E.A, Pai, E.F.
登録日2011-11-13
公開日2012-11-14
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural adaptations of L-2-haloacid dehalogenases that enable hydrolytic defluorination
To be Published
3V6N
DownloadVisualize
BU of 3v6n by Molmil
Crystal structure of a plant albumin from Cicer Arietinum showing hemagglutination
分子名称: CALCIUM ION, CHLORIDE ION, IODIDE ION, ...
著者Sharma, U, Suresh, C.G.
登録日2011-12-20
公開日2012-01-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a plant albumin from Cicer arietinum (chickpea) possessing hemopexin fold and hemagglutination activity
Planta, 2015
6G5W
DownloadVisualize
BU of 6g5w by Molmil
Crystal Structure of KDM4A with compound YP-03-038
分子名称: (4~{R})-5-methyl-4-phenyl-2-pyridin-2-yl-pyrazolidin-3-one, 1,2-ETHANEDIOL, CITRIC ACID, ...
著者Malecki, P.H, Carter, D.M, Gohlke, U, Specker, E, Nazare, M, Weiss, M.S, Heinemann, U.
登録日2018-03-30
公開日2019-04-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Enhanced Properties of a Benzimidazole Benzylpyrazole Lysine Demethylase Inhibitor: Mechanism-of-Action, Binding Site Analysis, and Activity in Cellular Models of Prostate Cancer.
J.Med.Chem., 64, 2021
7WXS
DownloadVisualize
BU of 7wxs by Molmil
Lysozyme protected by polyacrylamide gel
分子名称: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
著者Muroyama, H, Tomoike, F, Nagae, T, Okada, T.
登録日2022-02-15
公開日2023-02-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Post-crystallization protection of protein crystals by polyacrylamide
To Be Published
3UOY
DownloadVisualize
BU of 3uoy by Molmil
Crystal Structure of OTEMO complex with FAD and NADP (form 1)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, OTEMO, ...
著者Shi, R, Matte, A, Cygler, M, Lau, P.
登録日2011-11-17
公開日2012-02-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Cloning, Baeyer-Villiger biooxidations, and structures of the camphor pathway 2-oxo-{Delta}(3)-4,5,5-trimethylcyclopentenylacetyl-coenzyme A monooxygenase of Pseudomonas putida ATCC 17453.
Appl.Environ.Microbiol., 78, 2012
3V4M
DownloadVisualize
BU of 3v4m by Molmil
Crystal structure of a RNA binding domain of a U2 small nuclear ribonucleoprotein auxiliary factor 2 (U2AF) from Mus musculus at 1.80 A resolution
分子名称: CHLORIDE ION, SODIUM ION, Splicing factor U2AF 65 kDa subunit
著者Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
登録日2011-12-15
公開日2012-06-13
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a RNA binding domain of a U2 small nuclear ribonucleoprotein auxiliary factor 2 (U2AF) from Mus musculus at 1.80 A resolution
To be published
6GO4
DownloadVisualize
BU of 6go4 by Molmil
TdT chimera (Loop1 of pol mu) - binary complex with ddCTP
分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA nucleotidylexotransferase,DNA-directed DNA/RNA polymerase mu,DNA nucleotidylexotransferase, MAGNESIUM ION, ...
著者Loc'h, J, Gerodimos, C.A, Rosario, S, Lieber, M.R, Delarue, M.
登録日2018-06-01
公開日2019-06-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural evidence for an intransbase selection mechanism involving Loop1 in polymerase mu at an NHEJ double-strand break junction.
J.Biol.Chem., 294, 2019
3UY7
DownloadVisualize
BU of 3uy7 by Molmil
Designed protein KE59 R1 7/10H with G130S mutation
分子名称: Kemp eliminase KE59 R1 7/10H, SODIUM ION, SULFATE ION
著者Khersonsky, O, Kiss, G, Roethlisberger, D, Dym, O, Albeck, S, Houk, K.N, Baker, D, Tawfik, D.S, Israel Structural Proteomics Center (ISPC)
登録日2011-12-06
公開日2012-06-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Bridging the gaps in design methodologies by evolutionary optimization of the stability and proficiency of designed Kemp eliminase KE59.
Proc.Natl.Acad.Sci.USA, 109, 2012
4AJX
DownloadVisualize
BU of 4ajx by Molmil
Ligand controlled assembly of hexamers, dihexamers, and linear multihexamer structures by an engineered acylated insulin
分子名称: IMIDAZOLE, INSULIN, N-(16-Carboxyhexadecanoyl)-L-glutamic acid, ...
著者Steensgaard, D.B, Schluckebier, G, Strauss, H.M, Norrman, M, Thomsen, J.K, Friderichsen, A.V, Havelund, S, Jonassen, I.
登録日2012-02-20
公開日2013-01-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Ligand Controlled Assembly of Hexamers, Dihexamers, and Linear Multihexamer Structures by the Engineered Acylated Insulin Degludec.
Biochemistry, 52, 2013
6H10
DownloadVisualize
BU of 6h10 by Molmil
Crystal Structure of KDM4D with tetrazolylhydrazide ligand NR073
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Malecki, P.H, Weiss, M.S, Heinemann, U, Link, A.
登録日2018-07-10
公開日2020-01-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.104 Å)
主引用文献Crystal Structure of KDM4D with tetrazolylhydrazide ligand NR073
To be published
4AFX
DownloadVisualize
BU of 4afx by Molmil
Crystal structure of the reactive loop cleaved ZPI in I2 space group
分子名称: CALCIUM ION, PHOSPHATE ION, PROTEIN Z DEPENDENT PROTEASE INHIBITOR, ...
著者Zhou, A, Yan, Y, Wei, Z.
登録日2012-01-23
公開日2013-01-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural Basis for Catalytic Activation of Protein Z-Dependent Protease Inhibitor (Zpi) by Protein Z.
Blood, 120, 2012
6G8L
DownloadVisualize
BU of 6g8l by Molmil
14-3-3sigma in complex with a L132beta3L mutated YAP pS127 phosphopeptide
分子名称: 14-3-3 protein sigma, ACE-ARG-ALA-HIS-SEP-SER-PRO-ALA-SER-BLE-GLN, CHLORIDE ION, ...
著者Andrei, S.A, Thijssen, V, Brunsveld, L, Ottmann, C, Milroy, L.G.
登録日2018-04-09
公開日2019-04-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献A study on the effect of synthetic alpha-to-beta3-amino acid mutations on the binding of phosphopeptides to 14-3-3 proteins.
Chem.Commun.(Camb.), 55, 2019
435D
DownloadVisualize
BU of 435d by Molmil
5'-R(*UP*AP*GP*CP*CP*CP*C)-3', 5'-R(*GP*GP*GP*GP*CP*UP*A)-3'
分子名称: RNA (5'-R(*GP*GP*GP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*CP*CP*C)-3'), SODIUM ION
著者Mueller, U, Schuebel, H, Sprinzl, M, Heinemann, U.
登録日1998-10-23
公開日1999-06-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1.16 A resolution.
RNA, 5, 1999
6FPD
DownloadVisualize
BU of 6fpd by Molmil
AB21 protein from Agaricus bisporus
分子名称: 1,2-ETHANEDIOL, Protein AB21, SODIUM ION
著者Houser, J, Demo, G, Komarek, J, Wimmerova, M.
登録日2018-02-09
公開日2018-05-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and properties of AB21, a novel Agaricus bisporus protein with structural relation to bacterial pore-forming toxins.
Proteins, 86, 2018
6FQS
DownloadVisualize
BU of 6fqs by Molmil
3.11A complex of S.Aureus gyrase with imidazopyrazinone T3 and DNA
分子名称: 5-cyclopropyl-8-fluoranyl-7-pyridin-4-yl-imidazo[1,2-a]quinoxalin-4-one, DNA (5'-D(*GP*AP*GP*AP*GP*TP*AP*T*GP*GP*CP*CP*AP*TP*AP*CP*TP*CP*TP*T)-3'), DNA gyrase subunit A, ...
著者Bax, B.D, Germe, T, Basque, E, Maxwell, A.
登録日2018-02-14
公開日2018-04-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献A new class of antibacterials, the imidazopyrazinones, reveal structural transitions involved in DNA gyrase poisoning and mechanisms of resistance.
Nucleic Acids Res., 46, 2018
6FRO
DownloadVisualize
BU of 6fro by Molmil
Crystal structure of Hen Egg-White Lysozyme co-crystallized in presence of 100 mM Tb-Xo4 and 100 mM potassium iodide.
分子名称: IODIDE ION, Lysozyme C, SODIUM ION, ...
著者Engilberge, S, Riobe, F, Di Pietro, S, Girard, E, Dumont, E, Maury, O.
登録日2018-02-16
公開日2018-10-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography.
Chemistry, 24, 2018
6FSQ
DownloadVisualize
BU of 6fsq by Molmil
Structure of A3_bGFPD, an artificial bi-domain protein based on two different alphaRep domains : A3 and a GFP binding domain (bGFPD)
分子名称: MALONATE ION, SODIUM ION, alphaRep A3_bGFPD
著者Li de la Sierra-Gallay, I, Leger, C.
登録日2018-02-20
公開日2018-08-08
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Ligand-induced conformational switch in an artificial bidomain protein scaffold.
Sci Rep, 9, 2019
6FWB
DownloadVisualize
BU of 6fwb by Molmil
Crystal structure of Mat2A at 1.79 Angstron resolution
分子名称: GLYCEROL, S-adenosylmethionine synthase isoform type-2, SODIUM ION, ...
著者Zhou, A, Wei, Z, Bai, J, Wang, H.
登録日2018-03-06
公開日2019-03-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Identification of a natural inhibitor of methionine adenosyltransferase 2A regulating one-carbon metabolism in keratinocytes.
Ebiomedicine, 39, 2019
3V3R
DownloadVisualize
BU of 3v3r by Molmil
Crystal Structure of GES-11
分子名称: Extended spectrum class A beta-lactamase GES-11, IODIDE ION, SODIUM ION
著者Delbruck, H, Hoffmann, K.M.V, Bebrone, C.
登録日2011-12-14
公開日2012-09-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Kinetic and crystallographic studies of extended-spectrum GES-11, GES-12, and GES-14 beta-lactamases.
Antimicrob.Agents Chemother., 56, 2012
3USM
DownloadVisualize
BU of 3usm by Molmil
Crystal Structure of LeuT bound to L-selenomethionine in space group C2 from lipid bicelles (collected at 1.2 A)
分子名称: IODIDE ION, PHOSPHOCHOLINE, SELENOMETHIONINE, ...
著者Wang, H, Elferich, J, Gouaux, E.
登録日2011-11-23
公開日2012-01-11
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.008 Å)
主引用文献Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context.
Nat.Struct.Mol.Biol., 19, 2012
6G1B
DownloadVisualize
BU of 6g1b by Molmil
Corynebacterium glutamicum OxyR, oxidized form
分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, FORMIC ACID, HYDROGEN PEROXIDE, ...
著者Young, D.R, Pedre, B.P, Messens, J.M.
登録日2018-03-21
公開日2018-12-05
最終更新日2018-12-19
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural snapshots of OxyR reveal the peroxidatic mechanism of H2O2sensing.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3USZ
DownloadVisualize
BU of 3usz by Molmil
Crystal structure of truncated exo-1,3/1,4-beta-glucanase (EXOP) from Pseudoalteromonas sp. BB1
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Exo-1,3/1,4-beta-glucanase, ...
著者Nakatani, Y, Cutfield, S.M, Cutfield, J.F.
登録日2011-11-24
公開日2011-12-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and activity of exo-1,3/1,4-beta-glucanase from marine bacterium Pseudoalteromonas sp. BB1 showing a novel C-terminal domain
Febs J., 2011

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon