PDB: 36539 件ウェブページステータス検索Chemie searchBIRD

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8WHA	Structure of DDM1-nucleosome complex in the ADP-BeFx state with DDM1 bound to SHL2 and SHL-2 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DDM1, BERYLLIUM TRIFLUORIDE ION, ... 著者 Liu, Y, Zhang, Z, Du, J. 登録日 2023-09-22 公開日 2024-04-17 実験手法 ELECTRON MICROSCOPY (4.05 Å) 主引用文献 Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation. Nat.Plants, 10, 2024
8WH5	Structure of DDM1-nucleosome complex in the apo state 分子名称: ATP-dependent DNA helicase DDM1, DNA (antisense strand), DNA (sense strand), ... 著者 Liu, Y, Zhang, Z, Du, J. 登録日 2023-09-22 公開日 2024-04-17 実験手法 ELECTRON MICROSCOPY (3.58 Å) 主引用文献 Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation. Nat.Plants, 10, 2024
8WH8	Structure of DDM1-nucleosome complex in ADP state 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DDM1, DNA (antisense strand), ... 著者 Liu, Y, Zhang, Z, Du, J. 登録日 2023-09-22 公開日 2024-04-17 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation. Nat.Plants, 10, 2024
9C66	Structure of the Mena EVH1 domain bound to the polyproline segment of PTP1B 分子名称: 1,2-ETHANEDIOL, Protein enabled homolog, SULFATE ION, ... 著者 LaComb, L, Fedorov, E, Bonanno, J.B, Almo, S.C, Ghosh, A. 登録日 2024-06-07 公開日 2024-08-28 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Insights into the Interaction Landscape of the EVH1 Domain of Mena. Biochemistry, 63, 2024
1WPA	1.5 Angstrom crystal structure of human occludin fragment 413-522 分子名称: Occludin 著者 Li, Y, Lavie, A, Fanning, A.S, Anderson, J.M. 登録日 2004-09-01 公開日 2005-09-06 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure of the conserved cytoplasmic C-terminal domain of occludin: identification of the ZO-1 binding surface. J.Mol.Biol., 352, 2005
1WYM	Solution structure of the CH domain of human transgelin-2 分子名称: Transgelin-2 著者 Tomizawa, T, Kigawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-02-15 公開日 2005-08-15 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the CH domain of human transgelin-2 To be Published
1WF8	Solution structure of the PDZ domain of Spinophilin/NeurabinII protein 分子名称: Neurabin-I 著者 Qin, X, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2004-05-26 公開日 2005-06-07 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the PDZ domain of Spinophilin/NeurabinII protein To be Published
6YSY	Skeletal Myosin bound to MPH-220, MgADP-VO4 分子名称: (9~{S})-5-methyl-12-(4-morpholin-4-ylphenyl)-9-oxidanyl-4-thia-2,12-diazatricyclo[7.3.0.0^{3,7}]dodeca-1,3(7),5-trien-8-one, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Canon, L, Kikuti, C.M, Gyimesi, M, Malnasi-Csizmadia, A, Houdusse, A. 登録日 2020-04-23 公開日 2021-03-03 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.246 Å) 主引用文献 Single Residue Variation in Skeletal Muscle Myosin Enables Direct and Selective Drug Targeting for Spasticity and Muscle Stiffness. Cell, 183, 2020
7T3A	GATOR1-RAG-RAGULATOR - Inhibitory Complex 分子名称: GATOR complex protein DEPDC5, GATOR complex protein NPRL2, GATOR complex protein NPRL3, ... 著者 Egri, S.B, Shen, K. 登録日 2021-12-07 公開日 2022-04-06 最終更新日 2022-06-01 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Cryo-EM structures of the human GATOR1-Rag-Ragulator complex reveal a spatial-constraint regulated GAP mechanism. Mol.Cell, 82, 2022
7T3B	GATOR1-RAG-RAGULATOR - GAP Complex 分子名称: ALUMINUM FLUORIDE, GATOR complex protein DEPDC5, GATOR complex protein NPRL2, ... 著者 Egri, S.B, Shen, K. 登録日 2021-12-07 公開日 2022-04-06 最終更新日 2022-06-01 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Cryo-EM structures of the human GATOR1-Rag-Ragulator complex reveal a spatial-constraint regulated GAP mechanism. Mol.Cell, 82, 2022
6WQ1	Eukaryotic LanCL2 protein 分子名称: LanC-like protein 2, ZINC ION 著者 Nair, S.K, Garg, N. 登録日 2020-04-28 公開日 2021-05-05 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.295 Å) 主引用文献 LanCLs add glutathione to dehydroamino acids generated at phosphorylated sites in the proteome. Cell, 184, 2021
1E6H	A-SPECTRIN SH3 DOMAIN A11V, M25I, V44I, V58L MUTANTS 分子名称: SPECTRIN ALPHA CHAIN 著者 Vega, M.C, Serrano, L. 登録日 2000-08-17 公開日 2002-05-23 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Conformational Strain in the Hydrophobic Core and its Implications for Protein Folding and Design Nat.Struct.Biol., 9, 2002
6X3A	Crystal structure of the FN4-FN6 domains of human PTPRD 分子名称: GLYCEROL, Receptor-type tyrosine-protein phosphatase delta 著者 Bouyain, S, Kawakami, J.E. 登録日 2020-05-21 公開日 2021-05-26 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Complex protein interactions mediate Drosophila Lar function in muscle tissue. Plos One, 17, 2022
6X39	Crystal structure of the FN5 domain of Mouse Lar 分子名称: Receptor-type tyrosine-protein phosphatase F, sorbitol 著者 Bouyain, S, Kawakami, J.E. 登録日 2020-05-21 公開日 2021-05-26 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Complex protein interactions mediate Drosophila Lar function in muscle tissue. Plos One, 17, 2022
6X38	Crystal structure of the FN5 domain of Drosophila Lar 分子名称: Tyrosine-protein phosphatase Lar, ZINC ION 著者 Bouyain, S, Kawakami, J.E. 登録日 2020-05-21 公開日 2021-05-26 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Complex protein interactions mediate Drosophila Lar function in muscle tissue. Plos One, 17, 2022
1K58	Crystal Structure of Human Angiogenin Variant D116H 分子名称: Angiogenin 著者 Leonidas, D.D, Shapiro, R, Subbarao, G.V, Russo, A, Acharya, K.R. 登録日 2001-10-10 公開日 2002-03-20 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystallographic studies on the role of the C-terminal segment of human angiogenin in defining enzymatic potency. Biochemistry, 41, 2002
6XJX	MCU holocomplex in Low-calcium blocking state 分子名称: Calcium uniporter protein, mitochondrial, Calcium uptake protein 1, ... 著者 Wang, Y, Jiang, Y. 登録日 2020-06-24 公開日 2020-09-09 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structural insights into the Ca 2+ -dependent gating of the human mitochondrial calcium uniporter. Elife, 9, 2020
6XVM	Crystal structure of c-Src SH3 domain without ATCUN motif: monomer 2 分子名称: GLYCEROL, Proto-oncogene tyrosine-protein kinase Src 著者 Camara-Artigas, A, Plaza-Garrido, M. 登録日 2020-01-22 公開日 2020-04-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (0.9 Å) 主引用文献 The effect of an engineered ATCUN motif on the structure and biophysical properties of the SH3 domain of c-Src tyrosine kinase. J.Biol.Inorg.Chem., 25, 2020
6XR4	Integrative in situ structure of Parkinsons disease-linked human LRRK2 分子名称: Leucine-rich repeat serine/threonine-protein kinase 2 著者 Villa, E, Lasker, K, Audagnotto, M. 登録日 2020-07-10 公開日 2020-08-19 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (14 Å) 主引用文献 The In Situ Structure of Parkinson's Disease-Linked LRRK2. Cell, 182, 2020
6XVO	Crystal structure of the intertwined dimer of the c-Src SH3 domain without ATCUN motif 分子名称: DI(HYDROXYETHYL)ETHER, Proto-oncogene tyrosine-protein kinase Src, TRIETHYLENE GLYCOL 著者 Camara-Artigas, A, Plaza-Garrido, M. 登録日 2020-01-22 公開日 2020-04-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The effect of an engineered ATCUN motif on the structure and biophysical properties of the SH3 domain of c-Src tyrosine kinase. J.Biol.Inorg.Chem., 25, 2020
6XX5	Crystal structure of the c-Src SH3 domain H122R-Q128K mutant in complex with Ni(II) at pH 7.5 co-crystallized with methyl beta-cyclodextrin 分子名称: Cyclic 2,3-di-O-methyl-alpha-D-glucopyranose-(1-4)-2-O-methyl-alpha-D-glucopyranose-(1-4)-2,6-di-O-methyl-alpha-D-glucopyranose-(1-4)-2-O-methyl-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-3-O-methyl-alpha-D-glucopyranose, NICKEL (II) ION, Proto-oncogene tyrosine-protein kinase Src 著者 Camara-Artigas, A. 登録日 2020-01-26 公開日 2020-05-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 The effect of an engineered ATCUN motif on the structure and biophysical properties of the SH3 domain of c-Src tyrosine kinase. J.Biol.Inorg.Chem., 25, 2020
6XX2	Crystal structure of the c-Src SH3 domain H122R-Q128K mutant in complex with Cu(II) at pH 7.5 co-crystallized with methyl beta-cyclodextrin 分子名称: COPPER (II) ION, Cyclic 2,3-di-O-methyl-alpha-D-glucopyranose-(1-4)-2-O-methyl-alpha-D-glucopyranose-(1-4)-2,6-di-O-methyl-alpha-D-glucopyranose-(1-4)-2-O-methyl-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-3-O-methyl-alpha-D-glucopyranose, Proto-oncogene tyrosine-protein kinase Src 著者 Camara-Artigas, A. 登録日 2020-01-26 公開日 2020-04-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 The effect of an engineered ATCUN motif on the structure and biophysical properties of the SH3 domain of c-Src tyrosine kinase. J.Biol.Inorg.Chem., 25, 2020
1LB1	Crystal Structure of the Dbl and Pleckstrin homology domains of Dbs in complex with RhoA 分子名称: Guanine nucleotide exchange factor DBS, Transforming protein RhoA 著者 Snyder, J.T, Worthylake, D.K, Rossman, K.L, Betts, L, Pruitt, W.M, Siderovski, D.P, Der, C.J, Sondek, J. 登録日 2002-04-01 公開日 2002-05-29 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Structural basis for the selective activation of Rho GTPases by Dbl exchange factors. Nat.Struct.Biol., 9, 2002
1LKJ	NMR Structure of Apo Calmodulin from Yeast Saccharomyces cerevisiae 分子名称: Calmodulin 著者 Ishida, H, Nakashima, K, Kumaki, Y, Nakata, M, Hikichi, K, Yazawa, M. 登録日 2002-04-25 公開日 2003-04-29 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 The solution structure of apocalmodulin from Saccharomyces cerevisiae implies a mechanism for its unique Ca2+ binding property. Biochemistry, 41, 2002
6XU6	Drosophila melanogaster Testis 80S ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 2S ribosomal RNA, ... 著者 Hopes, T, Agapiou, M, Norris, K, McCarthy, C.G.P, OConnell, M.J, Fontana, J, Aspden, J.L. 登録日 2020-01-17 公開日 2021-07-28 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching. Nucleic Acids Res., 50, 2022

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