PDB: 896 件ウェブページステータス検索Chemie searchBIRD

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6RXL	Crystal structure of CobB wt in complex with H4K16-Crotonyl peptide 分子名称: Histone H4, NAD-dependent protein deacylase, ZINC ION 著者 Spinck, M, Gasper, R, Neumann, H. 登録日 2019-06-08 公開日 2020-04-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Evolved, Selective Erasers of Distinct Lysine Acylations. Angew.Chem.Int.Ed.Engl., 59, 2020
6GVS	Engineered glycolyl-CoA reductase comprising 8 mutations with bound NADP+ 分子名称: Aldehyde dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, POTASSIUM ION 著者 Zarzycki, J, Trudeau, D, Scheffen, M, Erb, T.J, Tawfik, D.S. 登録日 2018-06-21 公開日 2018-11-28 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.579 Å) 主引用文献 Design and in vitro realization of carbon-conserving photorespiration. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1XRK	Crystal structure of a mutant bleomycin binding protein from Streptoalloteichus hindustanus displaying increased thermostability 分子名称: BLEOMYCIN A2, Bleomycin resistance protein, SULFATE ION 著者 Brouns, S.J.J, Wu, H, Akerboom, J, Turnbull, A.P, de Vos, W.M, Van der Oost, J. 登録日 2004-10-15 公開日 2005-01-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Engineering a selectable marker for hyperthermophiles J.Biol.Chem., 280, 2005
7XUP	Crystal structure of TPe3.0 分子名称: Transcriptional regulator, PadR-like family 著者 Chen, X, Qian, J.Y, Sun, N.N, Zhong, F.R, Wu, Y.Z. 登録日 2022-05-19 公開日 2022-09-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.602 Å) 主引用文献 Enantioselective [2+2]-cycloadditions with triplet photoenzymes. Nature, 611, 2022
1FXY	COAGULATION FACTOR XA-TRYPSIN CHIMERA INHIBITED WITH D-PHE-PRO-ARG-CHLOROMETHYLKETONE 分子名称: COAGULATION FACTOR XA-TRYPSIN CHIMERA, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide 著者 Hopfner, K.P, Kopetzki, E, Kresse, G.-B, Huber, R, Bode, W, Engh, R.A. 登録日 1998-04-22 公開日 1998-06-17 最終更新日 2013-02-27 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 New enzyme lineages by subdomain shuffling. Proc.Natl.Acad.Sci.USA, 95, 1998
4HVY	A thermostable variant of human NUDT18 NUDIX domain obtained by Hot Colony Filtration 分子名称: GLYCEROL, MAGNESIUM ION, Nucleoside diphosphate-linked moiety X motif 18, ... 著者 Asial, I, Cheng, Y.X, Engman, H, Wu, B, Dollhopf, M, Nordlund, P, Cornvik, T. 登録日 2012-11-07 公開日 2014-01-01 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.46 Å) 主引用文献 Engineering protein thermostability using a generic activity-independent biophysical screen inside the cell. Nat Commun, 4, 2013
3LB9	Crystal structure of the B. circulans cpA123 circular permutant 分子名称: Endo-1,4-beta-xylanase 著者 D'Angelo, I, Reitinger, S, Ludwiczek, M, Strynadka, N, Withers, S.G, Mcintosh, L.P. 登録日 2010-01-08 公開日 2010-03-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Circular permutation of Bacillus circulans xylanase: a kinetic and structural study. Biochemistry, 49, 2010
3LTM	Structure of a new family of artificial alpha helicoidal repeat proteins (alpha-Rep) based on thermostable HEAT-like repeats 分子名称: Alpha-Rep4, DODECAETHYLENE GLYCOL, GLYCEROL, ... 著者 Urvoas, A, Guellouz, A, Graille, M, van Tilbeurgh, H, Desmadril, M, Minard, P. 登録日 2010-02-16 公開日 2010-10-13 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Design, production and molecular structure of a new family of artificial alpha-helicoidal repeat proteins ( alpha Rep) based on thermostable HEAT-like repeats J.Mol.Biol., 404, 2010
8XEG	Cryo-EM structure of Adeno-associated Virus 9P31 in 1.76 angstrom. 分子名称: Capsid protein VP1 著者 Zhang, R, Liu, Y, Lou, Z. 登録日 2023-12-12 公開日 2024-01-24 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (1.76 Å) 主引用文献 Structural basis of the recognition of adeno-associated virus by the neurological system-related receptor carbonic anhydrase IV. Plos Pathog., 20, 2024
3LTD	X-ray structure of a non-biological ATP binding protein determined at 2.8 A by multi-wavelength anomalous dispersion 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP BINDING PROTEIN-DX, CHLORIDE ION, ... 著者 Simmons, C.R, Magee, C.L, Allen, J.P, Chaput, J.C. 登録日 2010-02-15 公開日 2010-09-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins. Biochemistry, 49, 2010
3LTJ	Structure of a new family of artificial alpha helicoidal repeat proteins (alpha-Rep) based on thermostable HEAT-like repeats 分子名称: AlphaRep-4 著者 Urvoas, A, Guellouz, A, Graille, M, van Tilbeurgh, H, Desmadril, M, Minard, P. 登録日 2010-02-16 公開日 2010-10-13 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Design, production and molecular structure of a new family of artificial alpha-helicoidal repeat proteins ( alpha Rep) based on thermostable HEAT-like repeats J.Mol.Biol., 404, 2010
7JU0	RebH Variant 0S, Tryptamine 7-halogenase with bound tryptamine 分子名称: 2-(1H-INDOL-3-YL)ETHANAMINE, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent tryptophan halogenase RebH 著者 Andorfer, M.C, Sukumar, N, Lewis, J.C. 登録日 2020-08-18 公開日 2020-08-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.602 Å) 主引用文献 Structural and Computational Analysis of Laboratory-Evolved Halogenases Reveals Molecular Details of Site-Selectivity To Be Published
2ZM8	Structure of 6-Aminohexanoate-dimer Hydrolase, S112A/D370Y Mutant Complexed with 6-Aminohexanoate-dimer 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-AMINOHEXANOIC ACID, 6-aminohexanoate-dimer hydrolase, ... 著者 Ohki, T, Shibata, N, Higuchi, Y, Kawashima, Y, Takeo, M, Kato, D, Negoro, S. 登録日 2008-04-14 公開日 2009-04-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Two alternative modes for optimizing nylon-6 byproduct hydrolytic activity from a carboxylesterase with a beta-lactamase fold: X-ray crystallographic analysis of directly evolved 6-aminohexanoate-dimer hydrolase. Protein Sci., 18, 2009
3BVG	Manipulating the coupled folding and binding process drives affinity maturation in a protein-protein complex 分子名称: Enterotoxin type C-3, ZINC ION 著者 Cho, S, Eric, J.S. 登録日 2008-01-07 公開日 2009-01-27 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Assessing energetic contributions to binding from a disordered region in a protein-protein interaction Biochemistry, 49, 2010
7LTM	Hum8 capsid 分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Capsid protein 著者 Mietzsch, M, Agbandje-McKenna, M. 登録日 2021-02-19 公開日 2021-07-07 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.49 Å) 主引用文献 Receptor Switching in Newly Evolved Adeno-associated Viruses. J.Virol., 95, 2021
8UKE	Crystal Structure of Norbelladine O-methyltransferase variant in complex with SAH 分子名称: CALCIUM ION, Norbelladine 4'-O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE 著者 Kim, W, Zhang, Y.J. 登録日 2023-10-12 公開日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Biosensor and machine learning-aided engineering of an amaryllidaceae enzyme. Nat Commun, 15, 2024
2ZLY	Structure of 6-aminohexanoate-dimer hydrolase, D370Y mutant 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-aminohexanoate-dimer hydrolase, GLYCEROL, ... 著者 Ohki, T, Shibata, N, Higuchi, Y, Kawashima, Y, Takeo, M, Kato, D, Negoro, S. 登録日 2008-04-10 公開日 2009-04-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Two alternative modes for optimizing nylon-6 byproduct hydrolytic activity from a carboxylesterase with a beta-lactamase fold: X-ray crystallographic analysis of directly evolved 6-aminohexanoate-dimer hydrolase. Protein Sci., 18, 2009
2ZM9	Structure of 6-Aminohexanoate-dimer Hydrolase, A61V/S112A/A124V/R187S/F264C/G291R/G338A/D370Y mutant (Hyb-S4M94) with Substrate 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-AMINOHEXANOIC ACID, 6-aminohexanoate-dimer hydrolase, ... 著者 Ohki, T, Shibata, N, Higuchi, Y, Kawashima, Y, Takeo, M, Kato, D, Negoro, S. 登録日 2008-04-14 公開日 2009-04-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Two alternative modes for optimizing nylon-6 byproduct hydrolytic activity from a carboxylesterase with a beta-lactamase fold: X-ray crystallographic analysis of directly evolved 6-aminohexanoate-dimer hydrolase. Protein Sci., 18, 2009
7MKV	Engineered PLP-dependent decarboxylative aldolase from Aspergillus flavus, UstD2.0, bound as the internal aldimine 分子名称: Cysteine desulfurase-like protein ustD 著者 Ellis, J.M, Buller, A.R, Bingman, C.A. 登録日 2021-04-27 公開日 2022-05-04 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Biocatalytic synthesis of non-standard amino acids by a decarboxylative aldol reaction Nat Catal, 5, 2022
2ZM2	Structure of 6-aminohexanoate-dimer hydrolase, A61V/A124V/R187S/F264C/G291R/G338A/D370Y mutant (Hyb-S4M94) 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-aminohexanoate-dimer hydrolase, GLYCEROL, ... 著者 Ohki, T, Shibata, N, Higuchi, Y, Kawashima, Y, Takeo, M, Kato, D, Nego, S. 登録日 2008-04-10 公開日 2009-04-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Two alternative modes for optimizing nylon-6 byproduct hydrolytic activity from a carboxylesterase with a beta-lactamase fold: X-ray crystallographic analysis of directly evolved 6-aminohexanoate-dimer hydrolase. Protein Sci., 18, 2009
6IZC	Crystal structure of the chromosome-encoded beta-lactamase of Vibrio parahaemolyticus 分子名称: Beta-lactamase, PENTAETHYLENE GLYCOL, SULFATE ION 著者 Ma, Q, Li, P. 登録日 2018-12-19 公開日 2019-12-25 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural analysis of the CARB beta-lactamase from Vibrio parahaemolyticus facilitates application of the beta-lactam/ beta-lactamase inhibitor therapy. Biochimie, 171-172, 2020
6J1Q	Crystal structure of Candida Antarctica Lipase B mutant - RS 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ... 著者 Cen, Y.X, Zhou, J.H, Wu, Q. 登録日 2018-12-29 公開日 2020-01-01 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Stereodivergent Protein Engineering of a Lipase To Access All Possible Stereoisomers of Chiral Esters with Two Stereocenters. J.Am.Chem.Soc., 141, 2019
4OS7	Crystal structure of urokinase-type plasminogen activator (uPA) complexed with bicyclic peptide UK607 (bicyclic) 分子名称: ACETATE ION, GLYCEROL, SULFATE ION, ... 著者 Chen, S, Pojer, F, Heinis, C. 登録日 2014-02-12 公開日 2014-09-24 最終更新日 2021-06-02 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Dithiol amino acids can structurally shape and enhance the ligand-binding properties of polypeptides. Nat Chem, 6, 2014
6IYL	The structure of EntE with 3-cyanobenzoyl adenylate analog 分子名称: 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex, 5'-O-[(3-cyanobenzene-1-carbonyl)sulfamoyl]adenosine 著者 Miyanaga, A, Ishikawa, F. 登録日 2018-12-17 公開日 2019-04-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 An Engineered Aryl Acid Adenylation Domain with an Enlarged Substrate Binding Pocket. Angew.Chem.Int.Ed.Engl., 58, 2019
6IZD	Crystal structure of the chromosome-encoded beta-lactamase mutant R168H/M221I of Vibrio parahaemolyticus 分子名称: Beta-lactamase, GLYCEROL 著者 Ma, Q, Li, P. 登録日 2018-12-19 公開日 2019-12-25 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural analysis of the CARB beta-lactamase from Vibrio parahaemolyticus facilitates application of the beta-lactam/ beta-lactamase inhibitor therapy. Biochimie, 171-172, 2020

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