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6MP8
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BU of 6mp8 by Molmil
X-ray crystal structure of VioC bound to Fe(II), D-arginine, and 2-oxoglutarate
分子名称: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent L-arginine hydroxylase, D-ARGININE, ...
著者Dunham, N.P, Boal, A.K.
登録日2018-10-05
公開日2018-11-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献alpha-Amine Desaturation of d-Arginine by the Iron(II)- and 2-(Oxo)glutarate-Dependent l-Arginine 3-Hydroxylase, VioC.
Biochemistry, 57, 2018
6MP9
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BU of 6mp9 by Molmil
X-ray crystal structure of VioC bound to Fe(II), 2-oxo-5-guanidinopentanoic acid, and succinate
分子名称: 5-carbamimidamido-2-oxopentanoic acid, Alpha-ketoglutarate-dependent L-arginine hydroxylase, FE (II) ION, ...
著者Dunham, N.P, Boal, A.K.
登録日2018-10-05
公開日2018-11-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献alpha-Amine Desaturation of d-Arginine by the Iron(II)- and 2-(Oxo)glutarate-Dependent l-Arginine 3-Hydroxylase, VioC.
Biochemistry, 57, 2018
4BG1
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BU of 4bg1 by Molmil
Three dimensional structure of human gamma-butyrobetaine hydroxylase in complex with 1-(3-Carboxypropyl)-1-methylpyrrolidin-1-ium chloride
分子名称: 1-(3-carboxypropyl)-1-methylpyrrolidin-1-ium, GAMMA-BUTYROBETAINE DIOXYGENASE, HEXANE-1,6-DIAMINE, ...
著者Tars, K, Leitans, J, Kazaks, A.
登録日2013-03-22
公開日2014-03-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Targeting Carnitine Biosynthesis: Discovery of New Inhibitors Against Gamma-Butyrobetaine Hydroxylase.
J.Med.Chem., 57, 2014
1OIH
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BU of 1oih by Molmil
Crystal structure of the alkylsulfatase AtsK, a non-heme Fe(II) alphaketoglutarate dependent Dioxygenase
分子名称: PUTATIVE ALKYLSULFATASE ATSK, SODIUM ION
著者Mueller, I, Kahnert, A, Pape, T, Dierks, T, Meyer-Klauke, W, Kertesz, M, Uson, I.
登録日2003-06-18
公開日2004-03-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal Structure of the Alkylsulfatase Atsk: Insights Into the Catalytic Mechanism of the Fe(II) -Ketoglutarate-Dependent Dioxygenase Superfamily
Biochemistry, 42, 2004
4CWD
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BU of 4cwd by Molmil
CRYSTAL STRUCTURE OF HUMAN GAMMA-BUTYROBETAINE,2-OXOGLUTARATE IN COMPLEX WITH 449, A NOVEL SUBSTRATE
分子名称: 4-carboxy-1,1-dimethylpiperidin-1-ium, DI(HYDROXYETHYL)ETHER, GAMMA-BUTYROBETAINE DIOXYGENASE, ...
著者McDonough, M.A, Kochan, G, Rydzik, A, Schofield, C.J.
登録日2014-04-02
公開日2014-09-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Oxygenase-catalyzed desymmetrization of N,N-dialkyl-piperidine-4-carboxylic acids.
Angew. Chem. Int. Ed. Engl., 53, 2014
4Y0E
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BU of 4y0e by Molmil
X-ray Crystal Structure of a putative dioxygenase from Mycobacterium abscessus
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2015-02-06
公開日2015-11-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献X-ray Crystal Structure of a putative dioxygenase from Mycobacterium abscessus
to be published
1OTJ
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BU of 1otj by Molmil
Crystal structure of APO (iron-free) TauD
分子名称: 2-AMINOETHANESULFONIC ACID, Alpha-Ketoglutarate-Dependent Taurine Dioxygenase, CHLORIDE ION
著者O'Brien, J.R, Schuller, D.J, Yang, V.S, Dillard, B.D, Lanzilotta, W.N.
登録日2003-03-21
公開日2003-09-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Substrate-induced conformational changes in Escherichia coli taurine/alpha-ketoglutarate dioxygenase and insight into the oligomeric structure
Biochemistry, 42, 2003
5BKD
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BU of 5bkd by Molmil
Crystal structure of AAD-1 in complex with (R)-cyhalofop, Mn(II), and 2-oxoglutarate
分子名称: (2R)-2-[4-(4-cyano-2-fluorophenoxy)phenoxy]propanoic acid, (R)-phenoxypropionate/alpha-ketoglutarate-dioxygenase, 2-OXOGLUTARIC ACID, ...
著者Chekan, J.R, Nair, S.K.
登録日2019-06-02
公開日2019-06-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular basis for enantioselective herbicide degradation imparted by aryloxyalkanoate dioxygenases in transgenic plants.
Proc.Natl.Acad.Sci.USA, 116, 2019
2OG6
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BU of 2og6 by Molmil
Crystal structure of asparagine oxygenase in complex with Fe(II)
分子名称: CHLORIDE ION, FE (II) ION, asparagine oxygenase
著者Essen, L.-O, Strieker, M.
登録日2007-01-05
公開日2007-03-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.916 Å)
主引用文献Mechanistic and structural basis of stereospecific Cbeta-hydroxylation in calcium-dependent antibiotic, a daptomycin-type lipopeptide
Acs Chem.Biol., 2, 2007
4M2F
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BU of 4m2f by Molmil
Crystal structure of non-heme iron oxygenase OrfP in complex with Fe and L-canavanine
分子名称: FE (III) ION, L-CANAVANINE, L-arginine beta-hydroxylase
著者Chang, C.Y, Liu, Y.C, Lyu, S.Y, Wu, C.C, Li, T.L.
登録日2013-08-05
公開日2014-06-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Biosynthesis of streptolidine involved two unexpected intermediates produced by a dihydroxylase and a cyclase through unusual mechanisms.
Angew.Chem.Int.Ed.Engl., 53, 2014
6DAZ
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BU of 6daz by Molmil
X-ray crystal structure of VioC bound to Fe(II), 3S-hydroxy-L-homoarginine, and succinate
分子名称: (3S)-N~6~-carbamimidoyl-3-hydroxy-L-lysine, Alpha-ketoglutarate-dependent L-arginine hydroxylase, FE (II) ION, ...
著者Dunham, N.P, Mitchell, A.J, Boal, A.K.
登録日2018-05-02
公開日2018-05-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Two Distinct Mechanisms for C-C Desaturation by Iron(II)- and 2-(Oxo)glutarate-Dependent Oxygenases: Importance of alpha-Heteroatom Assistance.
J. Am. Chem. Soc., 140, 2018
5J92
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BU of 5j92 by Molmil
Crystal structure of a putative alpha-ketoglutarate dependent 2,4-D dioxygenase from Burkholderia xenovorans
分子名称: ACETATE ION, FE (II) ION, Putative alpha KG dependent 2,4-D dioxygenase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2016-04-08
公開日2016-05-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of a putative alpha-ketoglutarate dependent 2,4-D dioxygenase from Burkholderia xenovorans
to be published
7TCL
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BU of 7tcl by Molmil
Crystal structure of P.IsnB complexed with tyrosine isonitrile
分子名称: (2S)-3-(4-hydroxyphenyl)-2-isocyanopropanoic acid, MANGANESE (II) ION, SULFATE ION, ...
著者Kim, W, Zhang, Y.
登録日2021-12-26
公開日2022-08-31
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Elucidation of divergent desaturation pathways in the formation of vinyl isonitrile and isocyanoacrylate.
Nat Commun, 13, 2022
7SCP
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BU of 7scp by Molmil
The crystal structure of ScoE in complex with intermediate
分子名称: (3R)-3-(oxaloamino)butanoic acid, 1,2-ETHANEDIOL, FE (II) ION, ...
著者Cha, L, Chen, J, Zhou, J, Chang, W.
登録日2021-09-28
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Deciphering the Reaction Pathway of Mononuclear Iron Enzyme-Catalyzed N-C Triple Bond Formation in Isocyanide Lipopeptide and Polyketide Biosynthesis
Acs Catalysis, 12, 2022
6ALP
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BU of 6alp by Molmil
VioC L-arginine hydroxylase bound to Fe(II), 3S-hydroxy-L-arginine, and succinate
分子名称: (2S,3S)-3-HYDROXYARGININE, Alpha-ketoglutarate-dependent L-arginine hydroxylase, FE (II) ION, ...
著者Mitchell, A.J, Dunham, N.P, Boal, A.K.
登録日2017-08-08
公開日2017-09-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Visualizing the Reaction Cycle in an Iron(II)- and 2-(Oxo)-glutarate-Dependent Hydroxylase.
J. Am. Chem. Soc., 139, 2017
7N7V
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BU of 7n7v by Molmil
Crystal structure of TtnM, a Fe(II)-alpha-ketoglutarate-dependent hydroxylase from the tautomycetin biosynthesis pathway in Streptomyces griseochromogenes at 2 A.
分子名称: CHLORIDE ION, FE (II) ION, Predicted hydroxylase
著者Han, L, Xu, W, Ma, M, Miller, M.D, Shen, B, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2021-06-11
公開日2022-07-06
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structure of TtnM, a Fe(II)-alpha-ketoglutarate-dependent hydroxylase from the tautomycetin biosynthesis pathway in Streptomyces griseochromogenes.
To Be Published
4CVY
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BU of 4cvy by Molmil
Crystal structure of the M. tuberculosis sulfate ester dioxygenase Rv3406 in complex with iron.
分子名称: DIOXYGENASE RV3406/MT3514, FE (III) ION, NITRATE ION
著者Neres, J, Hartkoorn, R.C, Chiarelli, L.R, Gadupudi, R, Pasca, M, Mori, G, Farina, D, Salina, S, Makarov, V, Kolly, G.S, Molteni, E, Binda, C, Dhar, N, Ferrari, S, Brodin, P, Delorme, V, Landry, V, de Jesus Lopes Ribeiro, A.L, Saxena, P, Pojer, F, Venturelli, A, Carta, A, Luciani, R, Porta, A, Zanoni, G, De Rossi, E, Costi, M.P, Riccardi, G, Cole, S.T.
登録日2014-03-31
公開日2014-12-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献2-Carboxyquinoxalines Kill Mycobacterium Tuberculosis Through Noncovalent Inhibition of Dpre1.
Acs Chem.Biol., 10, 2015
3N6W
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BU of 3n6w by Molmil
Crystal structure of human gamma-butyrobetaine hydroxylase
分子名称: Gamma-butyrobetaine dioxygenase, SULFATE ION, ZINC ION
著者Rumnieks, J, Zeltins, A, Leonchiks, A, Kazaks, A, Kotelovica, S, Tars, K.
登録日2010-05-26
公開日2010-07-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of human gamma-butyrobetaine hydroxylase.
Biochem.Biophys.Res.Commun., 398, 2010
4M26
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BU of 4m26 by Molmil
Crystal structure of non-heme iron oxygenase OrfP in complex with Fe, succinate, and (3S)-hydroxy-L-Arg
分子名称: (2S,3S)-3-HYDROXYARGININE, 2-OXOGLUTARIC ACID, FE (III) ION, ...
著者Chang, C.Y, Liu, Y.C, Lyu, S.Y, Wu, C.C, Li, T.L.
登録日2013-08-05
公開日2014-06-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Biosynthesis of streptolidine involved two unexpected intermediates produced by a dihydroxylase and a cyclase through unusual mechanisms.
Angew.Chem.Int.Ed.Engl., 53, 2014
6D3M
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BU of 6d3m by Molmil
FT_T dioxygenase with bound quizalofop
分子名称: (2R)-2-{4-[(6-chloroquinoxalin-2-yl)oxy]phenoxy}propanoic acid, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
著者Rydel, T.J, Halls, C.E.
登録日2018-04-16
公開日2018-08-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Development of enzymes for robust aryloxyphenoxypropionate and synthetic auxin herbicide tolerance traits in maize and soybean crops.
Pest Manag. Sci., 75, 2019
6D3H
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BU of 6d3h by Molmil
FT_T dioxygenase with bound dichlorprop
分子名称: (2R)-2-(2,4-dichlorophenoxy)propanoic acid, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
著者Rydel, T.J, Halls, C.E.
登録日2018-04-16
公開日2018-08-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Development of enzymes for robust aryloxyphenoxypropionate and synthetic auxin herbicide tolerance traits in maize and soybean crops.
Pest Manag. Sci., 75, 2019
4YLM
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BU of 4ylm by Molmil
Structure of PvcB, an Fe, alpha-ketoglutarate dependent oxygenase from an isonitrile synthetic pathway
分子名称: GLYCEROL, Pyoverdine biosynthesis protein PvcB
著者Zhu, J, Lippa, G.M, Gulick, A.M, Tipton, P.A.
登録日2015-03-05
公開日2015-04-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Examining Reaction Specificity in PvcB, a Source of Diversity in Isonitrile-Containing Natural Products.
Biochemistry, 54, 2015
4BHF
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BU of 4bhf by Molmil
Three dimensional structure of human gamma-butyrobetaine hydroxylase in complex with 4-(Trimethylammonio)pentanoate
分子名称: 4-(Trimethylammonio)pentanoic acid, GAMMA-BUTYROBETAINE DIOXYGENASE, HEXANE-1,6-DIAMINE, ...
著者Tars, K, Leitans, J, Kazaks, A.
登録日2013-04-02
公開日2014-03-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Targeting Carnitine Biosynthesis: Discovery of New Inhibitors Against Gamma-Butyrobetaine Hydroxylase.
J.Med.Chem., 57, 2014
8KHT
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BU of 8kht by Molmil
The structure of Rv0097 with substrate
分子名称: (3R)-3-(2-hydroxy-2-oxoethylamino)decanoic acid, FE (II) ION, Oxidoreductase
著者Chen, J, Zhou, J.
登録日2023-08-22
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Variation in Biosynthesis and Metal-Binding Properties of Isonitrile-Containing Peptides Produced by Mycobacteria versus Streptomyces.
Acs Catalysis, 14, 2024
3R1J
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BU of 3r1j by Molmil
Crystal structure of Alpha-ketoglutarate-dependent taurine dioxygenase from Mycobacterium avium, native form
分子名称: 1,2-ETHANEDIOL, Alpha-ketoglutarate-dependent taurine dioxygenase, CHLORIDE ION, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2011-03-10
公開日2011-04-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015

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