PDB: 99 件ウェブページステータス検索Chemie searchBIRD

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6CIJ	Cryo-EM structure of mouse RAG1/2 HFC complex containing partial HMGB1 linker(3.9 A) 分子名称: CALCIUM ION, DNA (30-MER), DNA (41-MER), ... 著者 Chen, X, Kim, M, Chuenchor, W, Cui, Y, Zhang, X, Zhou, Z.H, Gellert, M, Yang, W. 登録日 2018-02-24 公開日 2018-04-25 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Cracking the DNA Code for V(D)J Recombination. Mol. Cell, 70, 2018
7YHQ	CryoEM structure of Arabidopsis ROS1 in complex with a covalent-linked reaction intermediate at 3.9 Angstroms resolution 分子名称: DNA (40-MER), IRON/SULFUR CLUSTER, Sex-determining region Y protein,DNA glycosylase/AP lyase ROS1 著者 Du, X, Du, J. 登録日 2022-07-14 公開日 2022-11-30 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Molecular basis of the plant ROS1-mediated active DNA demethylation. Nat.Plants, 9, 2023
6T7C	Structure of two copies of human Sox11 transcription factor in complex with a nucleosome 分子名称: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... 著者 Dodonova, S.O, Zhu, F, Dienemann, C, Taipale, J, Cramer, P. 登録日 2019-10-21 公開日 2020-04-29 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function. Nature, 580, 2020
6CIL	PRE-REACTION COMPLEX, RAG1(E962Q)/2-INTACT/INTACT 12/23RSS COMPLEX IN MN2+ 分子名称: High mobility group protein B1, Intact 12RSS substrate forward strand, Intact 12RSS substrate reverse strand, ... 著者 Chuenchor, W, Chen, X, Kim, M.S, Gellert, M, Yang, W. 登録日 2018-02-24 公開日 2018-04-25 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (4.15 Å) 主引用文献 Cracking the DNA Code for V(D)J Recombination. Mol. Cell, 70, 2018
6OEN	Cryo-EM structure of mouse RAG1/2 PRC complex (DNA1) 分子名称: CALCIUM ION, DNA (46-MER), DNA (57-MER), ... 著者 Chen, X, Cui, Y, Zhou, Z.H, Yang, W, Gellert, M. 登録日 2019-03-27 公開日 2020-01-29 最終更新日 2020-02-26 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Cutting antiparallel DNA strands in a single active site. Nat.Struct.Mol.Biol., 27, 2020
6T7D	Structure of human Sox11 transcription factor in complex with a nucleosome 分子名称: DNA (151-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... 著者 Dodonova, S.O, Zhu, F, Dienemann, C, Taipale, J, Cramer, P. 登録日 2019-10-21 公開日 2020-04-29 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function. Nature, 580, 2020
7Y8R	The nucleosome-bound human PBAF complex 分子名称: ACTB protein (Fragment), ADENOSINE-5'-DIPHOSPHATE, AT-rich interactive domain-containing protein 2, ... 著者 Wang, L, Yu, J, Yu, Z, Wang, Q, He, S, Xu, Y. 登録日 2022-06-24 公開日 2022-12-07 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structure of nucleosome-bound human PBAF complex. Nat Commun, 13, 2022
6ERQ	Structure of the human mitochondrial transcription initiation complex at the HSP promoter 分子名称: DNA-directed RNA polymerase, mitochondrial, Dimethyladenosine transferase 2, ... 著者 Hillen, H.S, Morozov, Y.I, Sarfallah, A, Temiakov, D, Cramer, P. 登録日 2017-10-18 公開日 2017-11-15 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 Structural Basis of Mitochondrial Transcription Initiation. Cell, 171, 2017
6ERP	Structure of the human mitochondrial transcription initiation complex at the LSP promoter 分子名称: DNA-directed RNA polymerase, mitochondrial, Dimethyladenosine transferase 2, ... 著者 Hillen, H.S, Morozov, Y.I, Sarfallah, A, Temiakov, D, Cramer, P. 登録日 2017-10-18 公開日 2017-11-15 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (4.502 Å) 主引用文献 Structural Basis of Mitochondrial Transcription Initiation. Cell, 171, 2017
6UPK	Structure of FACT_subnucleosome complex 1 分子名称: DNA (79-mer), FACT complex subunit SPT16, FACT complex subunit SSRP1, ... 著者 Zhou, K, Tan, Y.Z, Wei, H, Liu, Y, Carragher, B, Potter, C, Luger, K. 登録日 2019-10-17 公開日 2019-12-11 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 FACT caught in the act of manipulating the nucleosome. Nature, 577, 2020
6T7B	Structure of human Sox2 transcription factor in complex with a nucleosome 分子名称: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... 著者 Dodonova, S.O, Zhu, F, Dienemann, C, Taipale, J, Cramer, P. 登録日 2019-10-21 公開日 2020-04-29 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (5.1 Å) 主引用文献 Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function. Nature, 580, 2020
8I9M	The RAGE and HMGB1 complex 分子名称: Advanced glycosylation end product-specific receptor, High mobility group protein B1 著者 Han, C.W, Kim, H.J. 登録日 2023-02-07 公開日 2024-02-14 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (5.19 Å) 主引用文献 The RAGE and HMGB1 complex To Be Published
6UPL	Structure of FACT_subnucleosome complex 2 分子名称: DNA (79-mer), FACT complex subunit SPT16, FACT complex subunit SSRP1, ... 著者 Zhou, K, Tan, Y.Z, Wei, H, Liu, Y, Carragher, B, Potter, C, Luger, K. 登録日 2019-10-17 公開日 2019-12-11 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (7.4 Å) 主引用文献 FACT caught in the act of manipulating the nucleosome. Nature, 577, 2020
1CG7	HMG PROTEIN NHP6A FROM SACCHAROMYCES CEREVISIAE 分子名称: PROTEIN (NON HISTONE PROTEIN 6 A) 著者 Allain, F.H.T, Yen, Y.M, Masse, J.E, Schultze, P, Dieckmann, T, Johnson, R.C, Feigon, J. 登録日 1999-03-27 公開日 1999-10-14 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Solution structure of the HMG protein NHP6A and its interaction with DNA reveals the structural determinants for non-sequence-specific binding. EMBO J., 18, 1999
1K99	Solution Structure of the first HMG box in human Upstream binding factor 分子名称: Upstream binding factor 1 著者 Xu, Y, Yang, W, Wu, J, Shi, Y. 登録日 2001-10-28 公開日 2001-11-14 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the first HMG box domain in human upstream binding factor. Biochemistry, 41, 2002
1LWM	Solution Structure of the Sequence-Non-Specific HMGB protein NHP6A 分子名称: NONHISTONE CHROMOSOMAL PROTEIN 6A 著者 Masse, J.E, Wong, B, Yen, Y.-M, Allain, F.H.-T, Johnson, R.C, Feigon, J. 登録日 2002-05-31 公開日 2002-10-16 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 The S. cerevisiae architectural HMGB protein NHP6A complexed with DNA: DNA and protein conformational changes upon binding J.Mol.Biol., 323, 2002
8R1X	Solution structure and chemical shift assignments for HMG-D Y12F mutant complexed to a 14:12 dA2 bulge DNA 分子名称: DNA (5'-D(*CP*GP*AP*TP*AP*TP*TP*AP*AP*GP*AP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*TP*CP*AP*AP*TP*AP*TP*CP*G)-3'), High mobility group protein D 著者 Yang, J.C, Hill, G.R, Neuhaus, D. 登録日 2023-11-02 公開日 2024-09-11 実験手法 SOLUTION NMR 主引用文献 A Single Interfacial Point Mutation Rescues Solution Structure Determination of the Complex of HMG-D with a DNA Bulge. Chembiochem, 2024
2YQI	Solution structure of the second HMG-box domain from high mobility group protein B3 分子名称: High mobility group protein B3 著者 Qin, X.R, Hayahsi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-03-30 公開日 2008-04-01 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the second HMG-box domain from high mobility group protein B3 To be Published
2LEF	LEF1 HMG DOMAIN (FROM MOUSE), COMPLEXED WITH DNA (15BP), NMR, 12 STRUCTURES 分子名称: DNA (5'-D(*CP*AP*CP*CP*CP*TP*TP*TP*GP*AP*AP*GP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*CP*TP*TP*CP*AP*AP*AP*GP*GP*GP*TP*G)-3'), PROTEIN (LYMPHOID ENHANCER-BINDING FACTOR) 著者 Li, X, Love, J.J, Case, D.A, Wright, P.E. 登録日 1998-10-13 公開日 1998-10-21 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Structural basis for DNA bending by the architectural transcription factor LEF-1. Nature, 376, 1995
2LE4	Solution structure of the HMG box DNA-binding domain of human stem cell transcription factor Sox2 分子名称: Transcription factor SOX-2 著者 Sahu, S.C, Markley, J.L, Tonelli, M, Bahrami, A, Eghbalnia, H.R, Center for Eukaryotic Structural Genomics (CESG) 登録日 2011-06-06 公開日 2011-07-27 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution structure of the HMG box DNA-binding domain of human stem cell transcription factor Sox2 To be Published
1HME	STRUCTURE OF THE HMG BOX MOTIF IN THE B-DOMAIN OF HMG1 分子名称: HIGH MOBILITY GROUP PROTEIN FRAGMENT-B 著者 Weir, H.M, Kraulis, P.J, Hill, C.S, Raine, A.R.C, Laue, E.D, Thomas, J.O. 登録日 1994-02-10 公開日 1994-05-31 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structure of the HMG box motif in the B-domain of HMG1. EMBO J., 12, 1993
1HMA	THE SOLUTION STRUCTURE AND DYNAMICS OF THE DNA BINDING DOMAIN OF HMG-D FROM DROSOPHILA MELANOGASTER 分子名称: HMG-D 著者 Jones, D.N.M, Searles, M.A, Shaw, G.L, Churchill, M.E.A, Ner, S.S, Keeler, J, Travers, A.A, Neuhaus, D. 登録日 1994-05-12 公開日 1994-07-31 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 The solution structure and dynamics of the DNA-binding domain of HMG-D from Drosophila melanogaster. Structure, 2, 1994
1HRY	THE 3D STRUCTURE OF THE HUMAN SRY-DNA COMPLEX SOLVED BY MULTID-DIMENSIONAL HETERONUCLEAR-EDITED AND-FILTERED NMR 分子名称: DNA (5'-D(*GP*CP*AP*CP*AP*AP*AP*C)-3'), DNA (5'-D(*GP*TP*TP*TP*GP*TP*GP*C)-3'), HUMAN SRY 著者 Clore, G.M, Werner, M.H, Huth, J.R, Gronenborn, A.M. 登録日 1995-05-09 公開日 1995-09-15 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Molecular basis of human 46X,Y sex reversal revealed from the three-dimensional solution structure of the human SRY-DNA complex. Cell(Cambridge,Mass.), 81, 1995
2E6O	Solution structure of the HMG box domain from human HMG-box transcription factor 1 分子名称: HMG box-containing protein 1 著者 Qin, X.R, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2006-12-28 公開日 2007-07-03 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the HMG box domain from human HMG-box transcription factor 1 To be published
2YRQ	Solution structure of the tandem HMG box domain from Human High mobility group protein B1 分子名称: High mobility group protein B1 著者 Tomizawa, T, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-04-02 公開日 2008-02-12 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the tandem HMG box domain from Human High mobility group protein B1 To be Published

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