PDB: 597 件ウェブページステータス検索Chemie searchBIRD

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3FHC	Crystal structure of human Dbp5 in complex with Nup214 分子名称: ATP-dependent RNA helicase DDX19B, Nuclear pore complex protein Nup214 著者 von Moeller, H, Conti, E. 登録日 2008-12-09 公開日 2009-02-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The mRNA export protein DBP5 binds RNA and the cytoplasmic nucleoporin NUP214 in a mutually exclusive manner Nat.Struct.Mol.Biol., 16, 2009
3FHO	Structure of S. pombe Dbp5 分子名称: ATP-dependent RNA helicase dbp5 著者 Cheng, Z, Song, H. 登録日 2008-12-09 公開日 2009-10-13 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Solution and crystal structures of mRNA exporter Dbp5p and its interaction with nucleotides J.Mol.Biol., 388, 2009
3FHT	Crystal structure of human Dbp5 in complex with AMPPNP and RNA 分子名称: ATP-dependent RNA helicase DDX19B, GLYCEROL, MAGNESIUM ION, ... 著者 von Moeller, H, Conti, E. 登録日 2008-12-10 公開日 2009-02-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The mRNA export protein DBP5 binds RNA and the cytoplasmic nucleoporin NUP214 in a mutually exclusive manner Nat.Struct.Mol.Biol., 16, 2009
3FMP	Crystal structure of the nucleoporin Nup214 in complex with the DEAD-box helicase Ddx19 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DDX19B, Nuclear pore complex protein Nup214 著者 Napetschnig, J, Debler, E.W, Blobel, G, Hoelz, A. 登録日 2008-12-22 公開日 2009-05-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.19 Å) 主引用文献 Structural and functional analysis of the interaction between the nucleoporin Nup214 and the DEAD-box helicase Ddx19. Proc.Natl.Acad.Sci.USA, 106, 2009
3FMO	Crystal structure of the nucleoporin Nup214 in complex with the DEAD-box helicase Ddx19 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DDX19B, GLYCEROL, ... 著者 Napetschnig, J, Debler, E.W, Blobel, G, Hoelz, A. 登録日 2008-12-22 公開日 2009-05-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Structural and functional analysis of the interaction between the nucleoporin Nup214 and the DEAD-box helicase Ddx19. Proc.Natl.Acad.Sci.USA, 106, 2009
3G0H	Human dead-box RNA helicase DDX19, in complex with an ATP-analogue and RNA 分子名称: 5'-R(P*UP*UP*UP*UP*UP*UP*U)-3', ATP-dependent RNA helicase DDX19B, GLYCEROL, ... 著者 Karlberg, T, Lehtio, L, Collins, R, Arrowsmith, C.H, Berglund, H, Bountra, C, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Schutz, P, Siponen, M.I, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H, Structural Genomics Consortium (SGC) 登録日 2009-01-28 公開日 2009-02-17 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The DEXD/H-box RNA Helicase DDX19 Is Regulated by an {alpha}-Helical Switch. J.Biol.Chem., 284, 2009
3I61	Structure of Mss116p bound to ssRNA and ADP-Beryllium Fluoride 分子名称: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3', ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase MSS116, ... 著者 Del Campo, M, Lambowitz, A.M. 登録日 2009-07-06 公開日 2009-09-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of the Yeast DEAD box protein Mss116p reveals two wedges that crimp RNA Mol.Cell, 35, 2009
3I62	Structure of Mss116p bound to ssRNA and ADP-Aluminum Fluoride 分子名称: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3', ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase MSS116, ... 著者 Del Campo, M, Lambowitz, A.M. 登録日 2009-07-06 公開日 2009-09-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structure of the Yeast DEAD box protein Mss116p reveals two wedges that crimp RNA Mol.Cell, 35, 2009
3I5X	Structure of Mss116p bound to ssRNA and AMP-PNP 分子名称: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3', ATP-dependent RNA helicase MSS116, MAGNESIUM ION, ... 著者 Del Campo, M, Lambowitz, A.M. 登録日 2009-07-06 公開日 2009-09-08 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of the Yeast DEAD box protein Mss116p reveals two wedges that crimp RNA Mol.Cell, 35, 2009
3I5Y	Structure of Mss116p bound to ssRNA containing a single 5-BrU and AMP-PNP 分子名称: 5'-R(*UP*UP*UP*(5BU)P*UP*UP*UP*UP*UP*U)-3', ATP-dependent RNA helicase MSS116, MAGNESIUM ION, ... 著者 Del Campo, M, Lambowitz, A.M. 登録日 2009-07-06 公開日 2009-09-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Structure of the Yeast DEAD box protein Mss116p reveals two wedges that crimp RNA Mol.Cell, 35, 2009
3IUY	Crystal structure of DDX53 DEAD-box domain 分子名称: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Probable ATP-dependent RNA helicase DDX53 著者 Schutz, P, Karlberg, T, Collins, R, Arrowsmith, C.H, Berglund, H, Bountra, C, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Kraulis, P, Kotenyova, T, Kotzsch, A, Markova, N, Moche, M, Nielsen, T.K, Nordlund, P, Nyman, T, Persson, C, Roos, A.K, Siponen, M.I, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Wahlberg, E, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H.M, Structural Genomics Consortium (SGC) 登録日 2009-08-31 公開日 2009-10-20 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Comparative Structural Analysis of Human DEAD-Box RNA Helicases. Plos One, 5, 2010
2WWY	Structure of human RECQ-like helicase in complex with a DNA substrate 分子名称: 1,2-ETHANEDIOL, 5'-D(*DA DG DC DG DT DC DG DA DG DA DT DC DCP)-3', ATP-DEPENDENT DNA HELICASE Q1, ... 著者 Pike, A.C.W, Zhang, Y, Schnecke, C, Chaikuad, A, Krojer, T, Cooper, C.D.O, von Delft, F, Arrowsmith, C.H, Weigelt, J, Edwards, A, Bountra, C, Gileadi, O. 登録日 2009-10-30 公開日 2009-12-29 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Recq1 Helicase-Driven DNA Unwinding, Annealing, and Branch Migration: Insights from DNA Complex Structures Proc.Natl.Acad.Sci.USA, 112, 2015
3KX2	Crystal structure of Prp43p in complex with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 著者 Nielsen, K.H, Andersen, G.R, He, Y. 登録日 2009-12-02 公開日 2010-01-26 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for the function of DEAH helicases Embo Rep., 11, 2010
3LLM	Crystal Structure Analysis of a RNA Helicase 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase A, CACODYLATE ION, ... 著者 Schutz, P, Karlberg, T, Collins, R, Arrowsmith, C.H, Berglund, H, Bountra, C, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Kraulis, P, Kotenyova, T, Kotzsch, A, Markova, N, Moche, M, Nielsen, T.K, Nordlund, P, Nyman, T, Persson, C, Roos, A.K, Siponen, M.I, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Wahlberg, E, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H.M, Structural Genomics Consortium (SGC) 登録日 2010-01-29 公開日 2010-05-12 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of human RNA helicase A (DHX9): structural basis for unselective nucleotide base binding in a DEAD-box variant protein. J.Mol.Biol., 400, 2010
3LY5	DDX18 dead-domain 分子名称: ATP-dependent RNA helicase DDX18, MAGNESIUM ION, PHOSPHATE ION, ... 著者 Schutz, P, Karlberg, T, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Kraulis, P, Kotenyova, T, Kotzsch, A, Markova, N, Moche, M, Nielsen, T.K, Nordlund, P, Nyman, T, Persson, C, Roos, A.K, Siponen, M.I, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Wahlberg, E, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H.M, Structural Genomics Consortium (SGC) 登録日 2010-02-26 公開日 2010-05-12 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Comparative Structural Analysis of Human DEAD-Box RNA Helicases. Plos One, 5, 2010
2XAU	Crystal structure of the Prp43p DEAH-box RNA helicase in complex with ADP 分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ... 著者 Walbott, H, Mouffok, S, Capeyrou, R, Lebaron, S, van Tilbeurgh, H, Henry, Y, Leulliot, N. 登録日 2010-03-31 公開日 2010-06-09 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Prp43P Contains a Processive Helicase Structural Architecture with a Specific Regulatory Domain. Embo J., 29, 2010
2XB2	Crystal structure of the core Mago-Y14-eIF4AIII-Barentsz-UPF3b assembly shows how the EJC is bridged to the NMD machinery 分子名称: EUKARYOTIC INITIATION FACTOR 4A-III, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Buchwald, G, Ebert, J, Basquin, C, Sauliere, J, Jayachandran, U, Bono, F, Le Hir, H, Conti, E. 登録日 2010-04-03 公開日 2010-05-12 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Insights Into the Recruitment of the Nmd Machinery from the Crystal Structure of a Core Ejc-Upf3B Complex. Proc.Natl.Acad.Sci.USA, 107, 2010
3MWL	Q28E mutant of HERA N-terminal RecA-like domain in complex with 8-OXOADENOSINE 分子名称: 6-azanyl-9-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-7H-purin-8-one, Heat resistant RNA dependent ATPase, SULFATE ION 著者 Rudolph, M.G, Klostermeier, D. 登録日 2010-05-06 公開日 2011-03-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop. Biol.Chem., 392, 2011
3MWJ	Q28E mutant of HERA N-terminal RecA-like domain, apo form 分子名称: Heat resistant RNA dependent ATPase, SULFATE ION 著者 Rudolph, M.G, Klostermeier, D. 登録日 2010-05-06 公開日 2011-03-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop. Biol.Chem., 392, 2011
3MWK	Q28E mutant of HERA N-terminal RecA-like domain, complex with 8-oxo-AMP 分子名称: Heat resistant RNA dependent ATPase, SULFATE ION, [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate 著者 Rudolph, M.G, Klostermeier, D. 登録日 2010-05-06 公開日 2011-03-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop. Biol.Chem., 392, 2011
3NBF	Q28E mutant of hera helicase N-terminal domain bound to 8-oxo-ADP 分子名称: Heat resistant RNA dependent ATPase, [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate, [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl phosphono hydrogen phosphate 著者 Rudolph, M.G, Klostermeier, D. 登録日 2010-06-03 公開日 2011-03-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop. Biol.Chem., 392, 2011
2XGJ	Structure of Mtr4, a DExH helicase involved in nuclear RNA processing and surveillance 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-DEPENDENT RNA HELICASE DOB1, RNA (5'-(*AP*AP*AP*AP*A)-3') 著者 Weir, J.R, Bonneau, F, Hentschel, J, Conti, E. 登録日 2010-06-04 公開日 2010-06-23 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural Analysis Reveals the Characteristic Features of Mtr4, a Dexh Helicase Involved in Nuclear RNA Processing and Surveillance. Proc.Natl.Acad.Sci.USA, 107, 2010
3NEJ	Q28E mutant of Hera RNA helicase N-terminal domain - perfectly twinned hexagonal form 分子名称: Heat resistant RNA dependent ATPase 著者 Rudolph, M.G. 登録日 2010-06-09 公開日 2011-04-27 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.57 Å) 主引用文献 Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop. Biol.Chem., 392, 2011
3OIY	Helicase domain of reverse gyrase from Thermotoga maritima 分子名称: CHLORIDE ION, PYROPHOSPHATE 2-, reverse gyrase helicase domain 著者 Rudolph, M.G, Klostermeier, D. 登録日 2010-08-20 公開日 2010-12-01 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The latch modulates nucleotide and DNA binding to the helicase-like domain of Thermotoga maritima reverse gyrase and is required for positive DNA supercoiling. Nucleic Acids Res., 39, 2011
3P4Y	Helicase domain of reverse gyrase from Thermotoga maritima - P2 form 分子名称: reverse gyrase helicase domain 著者 Rudolph, M.G, Klostermeier, D. 登録日 2010-10-07 公開日 2011-06-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 The Conformational Flexibility of the Helicase-like Domain from Thermotoga maritima Reverse Gyrase Is Restricted by the Topoisomerase Domain. Biochemistry, 50, 2011

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