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2XK5
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BU of 2xk5 by Molmil
Crystal structure of K6-linked diubiquitin
分子名称: UBIQUITIN, ZINC ION
著者Virdee, S, Chin, J.W, Komander, D.
登録日2010-07-07
公開日2010-08-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Engineered Diubiquitin Synthesis Reveals K29-Isopeptide Specificity of an Otu Deubiquitinase
Nat.Chem.Biol., 6, 2010
2RSU
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BU of 2rsu by Molmil
Alternative structure of Ubiquitin
分子名称: Ubiquitin
著者Kitazawa, S, Kameda, T, Yagi-Utsumi, M, Kato, K, Kitahara, R.
登録日2012-06-15
公開日2013-03-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure of the Q41N Variant of Ubiquitin as a Model for the Alternatively Folded N2 State of Ubiquitin
Biochemistry, 52, 2013
2XEW
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BU of 2xew by Molmil
Crystal structure of K11-linked diubiquitin
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, CITRATE ANION, ...
著者Bremm, A, Freund, S.M.V, Komander, D.
登録日2010-05-18
公開日2010-07-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Lys11-Linked Ubiquitin Chains Adopt Compact Conformations and are Preferentially Hydrolyzed by the Deubiquitinase Cezanne
Nat.Struct.Mol.Biol., 17, 2010
3H7P
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BU of 3h7p by Molmil
Crystal structure of K63-linked di-ubiquitin
分子名称: CADMIUM ION, Ubiquitin
著者Weeks, S.D, Grasty, K.C, Hernandez-Cuebas, L, Loll, P.J.
登録日2009-04-28
公開日2009-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of Lys-63-linked tri- and di-ubiquitin reveal a highly extended chain architecture.
Proteins, 77, 2009
3H1U
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BU of 3h1u by Molmil
Structure of ubiquitin in complex with Cd ions
分子名称: CADMIUM ION, Ubiquitin
著者Qureshi, I.A, Ferron, F, Cheung, P, Lescar, J.
登録日2009-04-14
公開日2009-05-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystallographic structure of ubiquitin in complex with cadmium ions
BMC RES NOTES, 2, 2009
3H7S
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BU of 3h7s by Molmil
Crystal structures of K63-linked di- and tri-ubiquitin reveal a highly extended chain architecture
分子名称: Ubiquitin, ZINC ION
著者Weeks, S.D, Grasty, K.C, Hernandez-Cuebas, L, Loll, P.J.
登録日2009-04-28
公開日2009-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of Lys-63-linked tri- and di-ubiquitin reveal a highly extended chain architecture.
Proteins, 77, 2009
1NDD
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BU of 1ndd by Molmil
STRUCTURE OF NEDD8
分子名称: CHLORIDE ION, PROTEIN (UBIQUITIN-LIKE PROTEIN NEDD8), SULFATE ION
著者Whitby, F.G, Xia, G, Pickart, C.M, Hill, C.P.
登録日1998-08-21
公開日1999-02-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the human ubiquitin-like protein NEDD8 and interactions with ubiquitin pathway enzymes.
J.Biol.Chem., 273, 1998
1P1A
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BU of 1p1a by Molmil
NMR structure of ubiquitin-like domain of hHR23B
分子名称: UV excision repair protein RAD23 homolog B
著者Ryu, K.S, Lee, K.J, Bae, S.H, Kim, B.K, Kim, K.A, Choi, B.S.
登録日2003-04-11
公開日2004-07-13
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Binding surface mapping of intra- and interdomain interactions among hHR23B, ubiquitin, and polyubiquitin binding site 2 of S5a
J.Biol.Chem., 278, 2003
1P98
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BU of 1p98 by Molmil
High-resolution NMR structure of the Ubl-domain of HHR23A
分子名称: UV excision repair protein RAD23 homolog A
著者Mueller, T.D, Feigon, J.
登録日2003-05-09
公開日2003-10-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural determinants for the binding of ubiquitin-like domains to the proteasome.
Embo J., 22, 2003
1P0R
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BU of 1p0r by Molmil
Solution Structure of UBL5 a human Ubiquitin-Like Protein
分子名称: ubiquitin-like 5
著者McNally, T, Huang, Q, Janis, R.S, Liu, Z, Olejniczak, E.T, Reilly, R.M.
登録日2003-04-10
公開日2003-10-28
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural analysis of UBL5, a novel ubiquitin-like modifier
Protein Sci., 12, 2003
1OGW
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BU of 1ogw by Molmil
Synthetic Ubiquitin with fluoro-Leu at 50 and 67
分子名称: UBIQUITIN
著者Alexeev, D, Ramage, R, Young, D.W, Sawyer, L.
登録日2003-05-13
公開日2003-05-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Synthesis, Structural and Biological Studies of Ubiquitin Mutants Containing (2S, 4S)-5-Fluoroleucine Residues Strategically Placed in the Hydrophobic Core
Chembiochem, 4, 2003
1Q5W
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BU of 1q5w by Molmil
Ubiquitin Recognition by Npl4 Zinc-Fingers
分子名称: Ubiquitin, ZINC ION, homolog of yeast nuclear protein localization 4
著者Alam, S.L, Sun, J, Payne, M, Welch, B.D, Blake, B.K, Davis, D.R, Meyer, H.H, Emr, S.D, Sundquist, W.I.
登録日2003-08-11
公開日2004-03-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Ubiquitin interactions of NZF zinc fingers.
Embo J., 23, 2004
4EEW
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BU of 4eew by Molmil
Crystal structure of the Ubl domain of BAG6
分子名称: Large proline-rich protein BAG6
著者Kozlov, G, LePage, K, Vinaik, R, Gehring, K.
登録日2012-03-28
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of the Ubl domain of BAG6
To be Published
4XKL
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BU of 4xkl by Molmil
Crystal structure of NDP52 ZF2 in complex with mono-ubiquitin
分子名称: ACETATE ION, Calcium-binding and coiled-coil domain-containing protein 2, GLYCEROL, ...
著者Xie, X, Li, F, Wang, Y, Lin, Z, Chen, X, Liu, J, Pan, L.
登録日2015-01-12
公開日2015-11-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular basis of ubiquitin recognition by the autophagy receptor CALCOCO2
Autophagy, 11, 2015
4Y1H
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BU of 4y1h by Molmil
Crystal structure of K33 linked tri-Ubiquitin
分子名称: 1,2-ETHANEDIOL, Ubiquitin-40S ribosomal protein S27a
著者Kristariyanto, Y.A, Abdul Rehman, S.A, Choi, S.Y, Ritorto, S, Campbell, D.G, Morrice, N.A, Toth, R, Kulathu, Y.
登録日2015-02-07
公開日2015-03-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Assembly and structure of Lys33-linked polyubiquitin reveals distinct conformations.
Biochem.J., 467, 2015
4XKH
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BU of 4xkh by Molmil
CRYSTAL STRUCTURE OF THE AIRAPL TANDEM UIMS IN COMPLEX WITH A LYS48-LINKED TRI-UBIQUITIN
分子名称: AN1-type zinc finger protein 2B, Polyubiquitin-C
著者Rahighi, S, Kawasaki, M, Stanhill, A, Wakatsuki, S.
登録日2015-01-11
公開日2016-02-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Selective Binding of AIRAPL Tandem UIMs to Lys48-Linked Tri-Ubiquitin Chains.
Structure, 24, 2016
4XYZ
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BU of 4xyz by Molmil
Crystal structure of K33 linked di-Ubiquitin
分子名称: 1,2-ETHANEDIOL, ACETATE ION, IODIDE ION, ...
著者Kristariyanto, Y.A, Abdul Rehman, S.A, Choi, S.Y, Ritorto, S, Campbell, D.G, Morrice, N.A, Toth, R, Kulathu, Y.
登録日2015-02-03
公開日2015-03-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Assembly and structure of Lys33-linked polyubiquitin reveals distinct conformations.
Biochem.J., 467, 2015
4XOL
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BU of 4xol by Molmil
Observing the overall rocking motion of a protein in a crystal - Cubic Ubiquitin crystals.
分子名称: Ubiquitin, ZINC ION
著者Coquelle, N, Peixiang, M, Schanda, P, Colletier, J.P.
登録日2015-01-16
公開日2015-10-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Observing the overall rocking motion of a protein in a crystal.
Nat Commun, 6, 2015
4XOF
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BU of 4xof by Molmil
Observing the overall rocking motion of a protein in a crystal - Orthorhombic Ubiquitin crystals without Zinc.
分子名称: Ubiquitin
著者Coquelle, N, Ma, P, Schanda, P, Colletier, J.P.
登録日2015-01-16
公開日2015-10-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Observing the overall rocking motion of a protein in a crystal.
Nat Commun, 6, 2015
4WZP
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BU of 4wzp by Molmil
Ser65 phosphorylated ubiquitin, major conformation
分子名称: SULFATE ION, ubiquitin
著者Wauer, T, Wagstaff, J, Freund, S.M.V, Komander, D.
登録日2014-11-20
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Ubiquitin Ser65 phosphorylation affects ubiquitin structure, chain assembly and hydrolysis.
Embo J., 34, 2015
4XOK
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BU of 4xok by Molmil
Observing the overall rocking motion of a protein in a crystal.
分子名称: Ubiquitin, ZINC ION
著者Coquelle, N, Ma, P, Schanda, P, Colletier, J.P.
登録日2015-01-16
公開日2015-10-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Observing the overall rocking motion of a protein in a crystal.
Nat Commun, 6, 2015
4ZQS
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BU of 4zqs by Molmil
New compact conformation of linear Ub2 structure
分子名称: ubiquitin
著者Thach, T.T, Shin, D, Han, S, Lee, S.
登録日2015-05-11
公開日2016-04-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.804 Å)
主引用文献New conformations of linear polyubiquitin chains from crystallographic and solution-scattering studies expand the conformational space of polyubiquitin.
Acta Crystallogr D Struct Biol, 72, 2016
4ZPZ
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BU of 4zpz by Molmil
Crystal Structure of Semi-synthetic Ubiquitin with Phospho-Ser65 and Ala46Cys
分子名称: Polyubiquitin-B
著者Han, C, Virdee, S.
登録日2015-05-08
公開日2015-06-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献A Versatile Strategy for the Semisynthetic Production of Ser65 Phosphorylated Ubiquitin and Its Biochemical and Structural Characterisation.
Chembiochem, 16, 2015
4Z9S
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BU of 4z9s by Molmil
Non-covalent assembly of monoubiquitin that mimics K11 poly-ubiquitin
分子名称: MALONIC ACID, THIOCYANATE ION, Ubiquitin-40S ribosomal protein S27a
著者Levin-Kravets, O, Prag, G.
登録日2015-04-11
公開日2015-07-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Tetrameric Assembly of Monoubiquitin Accurately Mimics the Lys11 Polyubiquitin Chain Structure.
Biochemistry, 54, 2015
1UD7
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BU of 1ud7 by Molmil
SOLUTION STRUCTURE OF THE DESIGNED HYDROPHOBIC CORE MUTANT OF UBIQUITIN, 1D7
分子名称: PROTEIN (UBIQUITIN CORE MUTANT 1D7)
著者Johnson, E.C, Lazar, G.A, Desjarlais, J.R, Handel, T.M.
登録日1999-04-07
公開日1999-05-06
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of a designed hydrophobic core variant of ubiquitin.
Structure Fold.Des., 7, 1999

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