PDB: 10938 件ウェブページステータス検索Chemie searchBIRD

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8WHA	Structure of DDM1-nucleosome complex in the ADP-BeFx state with DDM1 bound to SHL2 and SHL-2 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DDM1, BERYLLIUM TRIFLUORIDE ION, ... 著者 Liu, Y, Zhang, Z, Du, J. 登録日 2023-09-22 公開日 2024-04-17 実験手法 ELECTRON MICROSCOPY (4.05 Å) 主引用文献 Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation. Nat.Plants, 10, 2024
8WH9	Structure of DDM1-nucleosome complex in ADP-BeFx state 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DDM1, BERYLLIUM TRIFLUORIDE ION, ... 著者 Liu, Y, Zhang, Z, Du, J. 登録日 2023-09-22 公開日 2024-04-17 実験手法 ELECTRON MICROSCOPY (3.31 Å) 主引用文献 Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation. Nat.Plants, 10, 2024
8WH8	Structure of DDM1-nucleosome complex in ADP state 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DDM1, DNA (antisense strand), ... 著者 Liu, Y, Zhang, Z, Du, J. 登録日 2023-09-22 公開日 2024-04-17 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation. Nat.Plants, 10, 2024
8WH5	Structure of DDM1-nucleosome complex in the apo state 分子名称: ATP-dependent DNA helicase DDM1, DNA (antisense strand), DNA (sense strand), ... 著者 Liu, Y, Zhang, Z, Du, J. 登録日 2023-09-22 公開日 2024-04-17 実験手法 ELECTRON MICROSCOPY (3.58 Å) 主引用文献 Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation. Nat.Plants, 10, 2024
8WG5	Cryo-EM structure of USP16 bound to H2AK119Ub nucleosome 分子名称: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... 著者 Ai, H.S, He, Z.Z, Deng, Z.H, Liu, L. 登録日 2023-09-20 公開日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3.05 Å) 主引用文献 Cryo-EM structure of USP16 bound to H2AK119Ub nucleosome To Be Published
8WF7	The Crystal Structure of integrase from Biortus 分子名称: ACETATE ION, Integrase, SULFATE ION 著者 Wang, F, Cheng, W, Yuan, Z, Qi, J, Li, J. 登録日 2023-09-19 公開日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 The Crystal Structure of integrase from Biortus To Be Published
8W9F	Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 3 分子名称: 3-DNA, 5-DNA, Chromatin modification-related protein EAF3, ... 著者 Wang, C, Zhan, X. 登録日 2023-09-05 公開日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structures and dynamics of Rpd3S complex bound to nucleosome. Sci Adv, 10, 2024
8W9E	Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 2 分子名称: 3-DNA, 5-DNA, Chromatin modification-related protein EAF3, ... 著者 Wang, C, Zhan, X. 登録日 2023-09-05 公開日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structures and dynamics of Rpd3S complex bound to nucleosome. Sci Adv, 10, 2024
8W9D	Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 1 分子名称: 3-DNA, 5-DNA, Chromatin modification-related protein EAF3, ... 著者 Wang, C, Zhan, X. 登録日 2023-09-05 公開日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structures and dynamics of Rpd3S complex bound to nucleosome. Sci Adv, 10, 2024
8W6V	Structural basis of chorismate isomerization by Arabidopsis isochorismate synthase ICS1 分子名称: ACETATE ION, FORMIC ACID, Isochorismate synthase 1, ... 著者 Su, Z.H, Ming, Z.H. 登録日 2023-08-29 公開日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis of chorismate isomerization by Arabidopsis ISOCHORISMATE SYNTHASE1. Plant Physiol., 2024
8W26	X-ray crystal structure of the GAF-PHY domains of SyB-Cph1 分子名称: 1,2-ETHANEDIOL, ACETATE ION, PHYCOCYANOBILIN, ... 著者 Burgie, E.S, Vierstra, R.D. 登録日 2024-02-20 公開日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of the Photosensory Module from a PAS-Less Cyanobacterial Phytochrome Reveals a Hybrid Activated Conformation in the Dark-Adapted Pr State To Be Published
8W02	Q108K:K40L:T51V:T53S:R58W mutant of hCRBPII bound to synthetic fluorophore TD-1V 分子名称: (2E)-3-{5-[4-(dimethylamino)phenyl]thiophen-2-yl}but-2-enal, ACETATE ION, Retinol-binding protein 2 著者 Ghanbarpour, A, Geiger, J.H, Borhan, B. 登録日 2024-02-13 公開日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.499 Å) 主引用文献 Regulation of Emission via a Protein-Bound Fluorophore To Be Published
8W00	Q108K:K40L:T51V:T53S:Y19W:R58W:L117E mutant of hCRBPII bound to synthetic fluorophore TD-1V 分子名称: (2E)-3-{5-[4-(dimethylamino)phenyl]thiophen-2-yl}but-2-enal, ACETATE ION, Retinol-binding protein 2 著者 Nossoni, Z, Bingham, C.R, Geiger, J.H. 登録日 2024-02-13 公開日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.23 Å) 主引用文献 Regulation of Emission via a Protein-Bound Fluorophore To Be Published
8VZZ	Q108K:K40L:T51V:T53S:Y19W:R58W mutant of hCRBPII bound to synthetic fluorophore TD-1V 分子名称: (2E)-3-{5-[4-(dimethylamino)phenyl]thiophen-2-yl}but-2-enal, ACETATE ION, Retinol-binding protein 2 著者 Nosssoni, Z, Bingham, C.R, Geiger, J.H, Borhan, B. 登録日 2024-02-13 公開日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 Regulation of Emission via a Protein-Bound Fluorophore To Be Published
8VZY	Q108K:K40L:T51V:T53S:R58Y mutant of hCRBPII bound to synthetic fluorophore TD-1V 分子名称: (2E)-3-{5-[4-(dimethylamino)phenyl]thiophen-2-yl}but-2-enal, ACETATE ION, Retinol-binding protein 2 著者 Nossoni, Z, Bingham, C.R, Geiger, J.H, Borhan, B. 登録日 2024-02-13 公開日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Regulation of Emission via a Protein-Bound Fluorophore To Be Published
8VZX	Q108K:K40L:T53A:R58F mutant of hCRBPII bound to synthetic fluorophore TD-1V 分子名称: (2E)-3-{5-[4-(dimethylamino)phenyl]thiophen-2-yl}but-2-enal, ACETATE ION, Retinol-binding protein 2 著者 Nossoni, Z, Bingham, C.R, Geiger, J.H. 登録日 2024-02-13 公開日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Regulation of Emission via a Protein-Bound Fluorophore To Be Published
8VHM	Structure of DHODH in Complex with Fragment 2 分子名称: ACETATE ION, CHLORIDE ION, Dihydroorotate dehydrogenase (quinone), ... 著者 Shaffer, P.L. 登録日 2024-01-02 公開日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Discovery of Alternative Binding Poses through Fragment-Based Identification of DHODH Inhibitors. Acs Med.Chem.Lett., 15, 2024
8VHL	Structure of DHODH in Complex with Ligand 17 分子名称: ACETATE ION, Dihydroorotate dehydrogenase (quinone), mitochondrial, ... 著者 Shaffer, P.L. 登録日 2024-01-02 公開日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Discovery of Alternative Binding Poses through Fragment-Based Identification of DHODH Inhibitors. Acs Med.Chem.Lett., 15, 2024
8VF3	The crystal structure of GALQE CYP199A4 bound to 4-methoxybenzoic acid 分子名称: 4-METHOXYBENZOIC ACID, ACETATE ION, CHLORIDE ION, ... 著者 Podgorski, M.N, Bell, S.G. 登録日 2023-12-21 公開日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.469 Å) 主引用文献 Engineering Peroxygenase Activity into Cytochrome P450 Monooxygenases through Modification of the Oxygen Binding Region Acs Catalysis, 2024
8VCN	GluER mutant - W66F F269Y Q293T F68Y T36E P263L 分子名称: ACETATE ION, FLAVIN MONONUCLEOTIDE, GLYCEROL, ... 著者 Jeffrey, P.D, Sorigue, D.R, Liu, Y, Hyster, T.K. 登録日 2023-12-14 公開日 2024-03-13 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Asymmetric Synthesis of alpha-Chloroamides via Photoenzymatic Hydroalkylation of Olefins. J.Am.Chem.Soc., 146, 2024
8V8W	Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (Tetragonal P form) 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, OXAMIC ACID, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2023-12-06 公開日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (Tetragonal P form) To be published
8V7O	Fab fragment of human mAb #58 in complex with computationally optimized broadly reactive H1 influenza hemagglutinin X6 分子名称: #58 heavy chain, #58 light chain, Hemagglutinin 著者 Nagashima, K.A, Mousa, J.J. 登録日 2023-12-04 公開日 2024-04-10 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.57 Å) 主引用文献 Structural basis for the broad antigenicity of the computationally optimized influenza hemagglutinin X6. Structure, 2024
8V7L	Cryo-EM structure of singly-bound SNF2h-nucleosome complex with SNF2h at inactive SHL2 (conformation 2) 分子名称: ADENOSINE-5'-DIPHOSPHATE, Histone H2A type 1, Histone H2B, ... 著者 Chio, U.S, Palovcak, E, Armache, J.P, Narlikar, G.J, Cheng, Y. 登録日 2023-12-04 公開日 2024-03-20 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2h-nucleosome complex without crosslinking. Nat Commun, 15, 2024
8V6V	Cryo-EM structure of doubly-bound SNF2h-nucleosome complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, Histone H2A type 1, Histone H2B, ... 著者 Chio, U.S, Palovcak, E, Armache, J.P, Narlikar, G.J, Cheng, Y. 登録日 2023-12-03 公開日 2024-03-20 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2h-nucleosome complex without crosslinking. Nat Commun, 15, 2024
8V5Z	UIC-1 mutant - UIC-1-L6M 分子名称: ACETONITRILE, UIC-1-L6M 著者 Heinz-Kunert, S.L. 登録日 2023-12-01 公開日 2024-03-06 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (0.84 Å) 主引用文献 Pore Restructuring of Peptide Frameworks by Mutations at Distal Packing Residues. Biomacromolecules, 25, 2024

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