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2H6K
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Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex
分子名称: Histone H3 K4-Me 9-residue peptide, WD-repeat protein 5
著者Ruthenburg, A.J, Wang, W.-K, Graybosch, D.M, Li, H, Allis, C.D, Patel, D.J, Verdine, G.L.
登録日2006-05-31
公開日2006-07-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Histone H3 recognition and presentation by the WDR5 module of the MLL1 complex.
Nat.Struct.Mol.Biol., 13, 2006
7V6Q
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Crystal structure of sNASP-ASF1A-H3.1-H4 complex
分子名称: GLYCEROL, Histone H3.1, Histone H4, ...
著者Liu, C.P, Xu, R.M.
登録日2021-08-20
公開日2021-12-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Distinct histone H3-H4 binding modes of sNASP reveal the basis for cooperation and competition of histone chaperones.
Genes Dev., 35, 2021
2CNX
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WDR5 and Histone H3 Lysine 4 dimethyl complex at 2.1 angstrom
分子名称: HISTONE H3 DIMETHYL-LYSINE 4, WD-REPEAT PROTEIN 5
著者Ruthenburg, A.J, Wang, W, Graybosch, D.M, Li, H, Allis, C.D, Patel, D.J, Verdine, G.L.
登録日2006-05-25
公開日2006-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Histone H3 Recognition and Presentation by the Wdr5 Module of the Mll1 Complex
Nat.Struct.Mol.Biol., 13, 2006
3ZVY
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PHD finger of human UHRF1 in complex with unmodified histone H3 N- terminal tail
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, E3 UBIQUITIN-PROTEIN LIGASE UHRF1, ...
著者Lallous, N, Birck, C, Mc Ewen, A.G, Legrand, P, Samama, J.P.
登録日2011-07-28
公開日2011-12-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The Phd Finger of Human Uhrf1 Reveals a New Subgroup of Unmethylated Histone H3 Tail Readers.
Plos One, 6, 2011
3WTP
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Crystal Structure of the heterotypic nucleosome containing human CENP-A and H3.3
分子名称: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Arimura, Y, Shirayama, K, Horikoshi, N, Fujita, R, Kagawa, W, Fukagawa, T, Almouzni, G, Kurumizaka, H.
登録日2014-04-14
公開日2014-12-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Crystal structure and stable property of the cancer-associated heterotypic nucleosome containing CENP-A and H3.3
Sci Rep, 4, 2014
4LK9
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Crystal Structure of MOZ double PHD finger histone H3 tail complex
分子名称: Histone H3.1, Histone acetyltransferase KAT6A, ZINC ION
著者Dreveny, I, Deeves, S.E, Yue, B, Heery, D.M.
登録日2013-07-07
公開日2013-10-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The double PHD finger domain of MOZ/MYST3 induces alpha-helical structure of the histone H3 tail to facilitate acetylation and methylation sampling and modification.
Nucleic Acids Res., 42, 2014
4HGA
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Structure of the variant histone H3.3-H4 heterodimer in complex with its chaperone DAXX
分子名称: Death domain-associated protein 6, Histone H3.3, Histone H4, ...
著者Liu, C.P, Xiong, C.Y, Wang, M.Z, Yu, Z.L, Yang, N, Chen, P, Zhang, Z.G, Li, G.H, Xu, R.M.
登録日2012-10-07
公開日2012-11-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.799 Å)
主引用文献Structure of the variant histone H3.3-H4 heterodimer in complex with its chaperone DAXX.
Nat.Struct.Mol.Biol., 19, 2012
2PVC
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DNMT3L recognizes unmethylated histone H3 lysine 4
分子名称: DNA (cytosine-5)-methyltransferase 3-like, Histone H3 peptide, ZINC ION
著者Cheng, X.
登録日2007-05-09
公開日2007-08-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.69 Å)
主引用文献DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA.
Nature, 448, 2007
5T8R
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Crystal structure of human BAZ2A PHD zinc finger in complex with unmodified H3 10-mer
分子名称: Bromodomain adjacent to zinc finger domain protein 2A, GLYCEROL, Histone H3.1, ...
著者Amato, A, Gadd, M.S, Bortoluzzi, A, Ciulli, A.
登録日2016-09-08
公開日2017-04-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of molecular recognition of helical histone H3 tail by PHD finger domains.
Biochem. J., 474, 2017
5VA6
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CRYSTAL STRUCTURE OF ATXR5 IN COMPLEX WITH HISTONE H3.1 MONO-METHYLATED ON R26
分子名称: Histone H3.1, Probable Histone-lysine N-methyltransferase ATXR5, S-ADENOSYL-L-HOMOCYSTEINE
著者Bergamin, E, Sarvan, S, Malette, J, Eram, M, Yeung, S, Mongeon, V, Joshi, M, Brunzelle, J.S, Michaels, S.D, Blais, A, Vedadi, M, Couture, J.-F.
登録日2017-03-24
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular basis for the methylation specificity of ATXR5 for histone H3.
Nucleic Acids Res., 45, 2017
7W5M
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BU of 7w5m by Molmil
Crystal structure of AtNASP in complex of H3 alpha3 helix peptide
分子名称: GLYCEROL, H3 alpha3 helix peptide, SULFATE ION, ...
著者Liu, Y, Bao, H.
登録日2021-11-30
公開日2022-05-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for histone H3 recognition by NASP in Arabidopsis.
J Integr Plant Biol, 64, 2022
2V1D
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BU of 2v1d by Molmil
Structural basis of LSD1-CoREST selectivity in histone H3 recognition
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, HISTONE H3.1T, LYSINE-SPECIFIC HISTONE DEMETHYLASE 1, ...
著者Forneris, F, Binda, C, Adamo, A, Battaglioli, E, Mattevi, A.
登録日2007-05-23
公開日2007-05-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural Basis of Lsd1-Corest Selectivity in Histone H3 Recognition.
J.Biol.Chem., 282, 2007
5AY8
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BU of 5ay8 by Molmil
Crystal structure of human nucleosome containing H3.Y
分子名称: CHLORIDE ION, DNA (146-MER), H3.Y, ...
著者Kujirai, T, Horikoshi, N, Sato, K, Maehara, K, Machida, S, Osakabe, A, Kimura, H, Ohkawa, Y, Kurumizaka, H.
登録日2015-08-10
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure and function of human histone H3.Y nucleosome
Nucleic Acids Res., 44, 2016
6KXV
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BU of 6kxv by Molmil
Crystal structure of a nucleosome containing Leishmania histone H3
分子名称: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Dacher, M, Taguchi, H, Kujirai, T, Kurumizaka, H.
登録日2019-09-13
公開日2020-07-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.63 Å)
主引用文献Incorporation and influence of Leishmania histone H3 in chromatin.
Nucleic Acids Res., 47, 2019
3T6R
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BU of 3t6r by Molmil
Structure of UHRF1 in complex with unmodified H3 N-terminal tail
分子名称: E3 ubiquitin-protein ligase UHRF1, Histone H3.1t N-terminal peptide, MAGNESIUM ION, ...
著者Xie, S, Jakoncic, J, Qian, C.M.
登録日2011-07-29
公開日2011-11-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献UHRF1 double tudor domain and the adjacent PHD finger act together to recognize K9me3-containing histone H3 tail
J.Mol.Biol., 415, 2012
3UEC
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BU of 3uec by Molmil
Crystal structure of human Survivin bound to histone H3 phosphorylated on threonine-3.
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Baculoviral IAP repeat-containing protein 5, ...
著者Niedzialkowska, E, Porebski, P.J, Cooper, D.R, Chruszcz, M, Wang, F, Higgins, J.M, Stukenberg, P.T, Minor, W.
登録日2011-10-30
公開日2012-03-07
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Molecular basis for phosphospecific recognition of histone H3 tails by Survivin paralogues at inner centromeres.
Mol.Biol.Cell, 23, 2012
3UEE
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BU of 3uee by Molmil
Crystal structure of human Survivin K62A mutant bound to N-terminal histone H3
分子名称: Baculoviral IAP repeat-containing protein 5, N-terminal fragment of histone H3, ZINC ION
著者Niedzialkowska, E, Porebski, P.J, Wang, F, Higgins, J.M, Stukenberg, P.T, Minor, W.
登録日2011-10-30
公開日2012-03-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Molecular basis for phosphospecific recognition of histone H3 tails by Survivin paralogues at inner centromeres.
Mol.Biol.Cell, 23, 2012
3UED
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BU of 3ued by Molmil
Crystal structure of human Survivin bound to histone H3 phosphorylated on threonine-3 (C2 space group).
分子名称: Baculoviral IAP repeat-containing protein 5, N-terminal fragment of histone H3, ZINC ION
著者Niedzialkowska, E, Porebski, P.J, Wang, F, Higgins, J.M, Stukenberg, P.T, Minor, W.
登録日2011-10-30
公開日2012-03-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular basis for phosphospecific recognition of histone H3 tails by Survivin paralogues at inner centromeres.
Mol.Biol.Cell, 23, 2012
4O30
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Crystal structure of ATXR5 in complex with histone H3.1 and AdoHcy
分子名称: BETA-MERCAPTOETHANOL, DIMETHYL SULFOXIDE, Histone-lysine N-methyltransferase ATXR6, ...
著者Bergamin, E, Mongeon, V, Couture, J.F.
登録日2013-12-17
公開日2014-03-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Selective methylation of histone H3 variant H3.1 regulates heterochromatin replication.
Science, 343, 2014
4GNE
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BU of 4gne by Molmil
Crystal Structure of NSD3 tandem PHD5-C5HCH domains complexed with H3 peptide 1-7
分子名称: Histone H3.3, Histone-lysine N-methyltransferase NSD3, ZINC ION
著者Li, F, He, C, Wu, J, Shi, Y.
登録日2012-08-17
公開日2013-01-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献The methyltransferase NSD3 has chromatin-binding motifs, PHD5-C5HCH, that are distinct from other NSD (nuclear receptor SET domain) family members in their histone H3 recognition.
J.Biol.Chem., 288, 2013
4GNF
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BU of 4gnf by Molmil
Crystal Structure of NSD3 tandem PHD5-C5HCH domains complexed with H3 peptide 1-15
分子名称: Histone H3.3, Histone-lysine N-methyltransferase NSD3, ZINC ION
著者Li, F, He, C, Wu, J, Shi, Y.
登録日2012-08-17
公開日2013-01-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The methyltransferase NSD3 has chromatin-binding motifs, PHD5-C5HCH, that are distinct from other NSD (nuclear receptor SET domain) family members in their histone H3 recognition.
J.Biol.Chem., 288, 2013
5FB0
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BU of 5fb0 by Molmil
Crystal Structure of a PHD finger bound to histone H3 T3ph peptide
分子名称: Nuclear autoantigen Sp-100, Peptide from Histone H3, ZINC ION
著者Li, H, Zhang, X.
登録日2015-12-13
公開日2016-05-04
最終更新日2016-06-22
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Multifaceted Histone H3 Methylation and Phosphorylation Readout by the Plant Homeodomain Finger of Human Nuclear Antigen Sp100C
J.Biol.Chem., 291, 2016
4ZBJ
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UBN1 peptide bound to H3.3/H4/Asf1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Histone H3, ...
著者Marmorstein, R, Ricketts, M.D, Tang, Y.
登録日2015-04-14
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.248 Å)
主引用文献Ubinuclein-1 confers histone H3.3-specific-binding by the HIRA histone chaperone complex.
Nat Commun, 6, 2015
3UEF
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Crystal structure of human Survivin bound to histone H3 (C2 space group).
分子名称: 1,2-ETHANEDIOL, Baculoviral IAP repeat-containing protein 5, N-terminal fragment of histone H3, ...
著者Niedzialkowska, E, Porebski, P.J, Wang, F, Higgins, J.M, Stukenberg, P.T, Minor, W.
登録日2011-10-30
公開日2012-03-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Molecular basis for phosphospecific recognition of histone H3 tails by Survivin paralogues at inner centromeres.
Mol.Biol.Cell, 23, 2012
5FB1
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Crystal Structure of a PHD finger bound to histone H3 K9me3 peptide
分子名称: MALONATE ION, Nuclear autoantigen Sp-100, Peptide from Histone H3, ...
著者Li, H, Zhang, X.
登録日2015-12-13
公開日2016-05-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Multifaceted Histone H3 Methylation and Phosphorylation Readout by the Plant Homeodomain Finger of Human Nuclear Antigen Sp100C
J.Biol.Chem., 291, 2016

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