PDB: 890 件ウェブページステータス検索Chemie searchBIRD

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8PN8	Engineered glycolyl-CoA carboxylase (L100N variant) with bound CoA 分子名称: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, COENZYME A, Propionyl-CoA carboxylase alpha subunit, ... 著者 Zarzycki, J, Marchal, D.G, Schulz, L, Prinz, S, Erb, T.J. 登録日 2023-06-30 公開日 2023-11-29 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (2.31 Å) 主引用文献 Machine Learning-Supported Enzyme Engineering toward Improved CO 2 -Fixation of Glycolyl-CoA Carboxylase. Acs Synth Biol, 12, 2023
2ORI	Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (A193V/Q199R/) 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ... 著者 Counago, R, Shamoo, Y, Wilson, C.J, Wu, G, Myers, J. 登録日 2007-02-02 公開日 2008-01-15 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (A193V/Q199R/) To be Published
2OO7	Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (T179I/Q199R) 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ... 著者 Counago, R, Wilson, C.J, Wu, G, Myers, J.C, Wittung-Stafshede, P, Shamoo, Y. 登録日 2007-01-25 公開日 2008-02-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (T179I/Q199R) To be Published
2OSB	Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q16L/Q199R/) 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ... 著者 Myers, J, Counago, R, Wilson, C.J, Wu, G, Shamoo, Y. 登録日 2007-02-05 公開日 2008-01-15 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q16L/Q199R/) To be Published
2QAJ	Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q199R/G213E) 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ... 著者 Counago, R, Wilson, C.J, Myers, J, Wu, G, Shamoo, Y. 登録日 2007-06-15 公開日 2008-04-29 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q199R/G213E) To be Published
4ZV6	Crystal structure of the artificial alpharep-7 octarellinV.1 complex 分子名称: AlphaRep-7, Octarellin V.1 著者 Figueroa, M, Sleutel, M, Urvoas, A, Valerio-Lepiniec, M, Minard, P, Martial, J.A, van de Weerdt, C. 登録日 2015-05-18 公開日 2016-05-25 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 The unexpected structure of the designed protein Octarellin V.1 forms a challenge for protein structure prediction tools. J.Struct.Biol., 195, 2016
6GVS	Engineered glycolyl-CoA reductase comprising 8 mutations with bound NADP+ 分子名称: Aldehyde dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, POTASSIUM ION 著者 Zarzycki, J, Trudeau, D, Scheffen, M, Erb, T.J, Tawfik, D.S. 登録日 2018-06-21 公開日 2018-11-28 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.579 Å) 主引用文献 Design and in vitro realization of carbon-conserving photorespiration. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7XUP	Crystal structure of TPe3.0 分子名称: Transcriptional regulator, PadR-like family 著者 Chen, X, Qian, J.Y, Sun, N.N, Zhong, F.R, Wu, Y.Z. 登録日 2022-05-19 公開日 2022-09-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.602 Å) 主引用文献 Enantioselective [2+2]-cycloadditions with triplet photoenzymes. Nature, 611, 2022
7XUQ	Crystal structure of Tpe3.0 complexed with N-Boc-3-alkenylindole 分子名称: Transcriptional regulator, PadR-like family, dimethyl 2-[[2-methyl-1-[(2-methylpropan-2-yl)oxycarbonyl]indol-3-yl]methyl]-2-prop-2-enyl-propanedioate 著者 Chen, X, Qian, J.Y, Sun, N.N, Zhong, F.R, Wu, Y.Z. 登録日 2022-05-19 公開日 2022-09-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Enantioselective [2+2]-cycloadditions with triplet photoenzymes. Nature, 611, 2022
2ZM8	Structure of 6-Aminohexanoate-dimer Hydrolase, S112A/D370Y Mutant Complexed with 6-Aminohexanoate-dimer 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-AMINOHEXANOIC ACID, 6-aminohexanoate-dimer hydrolase, ... 著者 Ohki, T, Shibata, N, Higuchi, Y, Kawashima, Y, Takeo, M, Kato, D, Negoro, S. 登録日 2008-04-14 公開日 2009-04-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Two alternative modes for optimizing nylon-6 byproduct hydrolytic activity from a carboxylesterase with a beta-lactamase fold: X-ray crystallographic analysis of directly evolved 6-aminohexanoate-dimer hydrolase. Protein Sci., 18, 2009
5BOP	Crystal structure of the artificial nanobody octarellinV.1 complex 分子名称: Nanobody, Octarellin V.1 著者 Figueroa, M, Sleutel, M, Pardon, E, Steyaert, J, Martial, J.A, van de Weerdt, C. 登録日 2015-05-27 公開日 2016-05-25 最終更新日 2016-06-08 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 The unexpected structure of the designed protein Octarellin V.1 forms a challenge for protein structure prediction tools. J.Struct.Biol., 195, 2016
7DNA	Photocleavable Fluorescent Protein in green and red form 分子名称: Green-to-red photoconvertible GFP-like protein, PHENYLALANINE AMIDE 著者 Wen, Y, Lemieux, J.M. 登録日 2020-12-09 公開日 2021-01-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Photocleavable proteins that undergo fast and efficient dissociation. Chem Sci, 12, 2021
2RKX	The 3D structure of chain D, cyclase subunit of imidazoleglycerol_evolvedcerolphosphate synthase 分子名称: Cyclase subunit of imidazoleglycerol_evolvedcerolphosphate synthase 著者 Tawfik, D, Khersonsky, O, Albeck, S, Dym, O, Israel Structural Proteomics Center (ISPC) 登録日 2007-10-18 公開日 2008-03-18 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Kemp elimination catalysts by computational enzyme design. Nature, 453, 2008
7DMX	Photocleavable Fluorescent Protein in green form 分子名称: PhoCl green 著者 Wen, Y, Lemieux, M.J. 登録日 2020-12-08 公開日 2021-01-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Photocleavable proteins that undergo fast and efficient dissociation. Chem Sci, 12, 2021
7DNB	Crystal structure of PhoCl barrel 分子名称: PhoCl Barrel, SODIUM ION 著者 Wen, Y, Lemieux, J.M. 登録日 2020-12-09 公開日 2021-01-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Photocleavable proteins that undergo fast and efficient dissociation. Chem Sci, 12, 2021
7BDN	Structure of the Streptomyces coelicolor small laccase - cubic crystal form 分子名称: COPPER (II) ION, Putative copper oxidase 著者 Zovo, K, Majumdar, S, Lukk, T. 登録日 2020-12-22 公開日 2022-01-12 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Substitution of the Methionine Axial Ligand of the T1 Copper for the Fungal-like Phenylalanine Ligand (M298F) Causes Local Structural Perturbations that Lead to Thermal Instability and Reduced Catalytic Efficiency of the Small Laccase from Streptomyces coelicolor A3(2). Acs Omega, 7, 2022
7BFM	Structure of the M198F M298F double mutant of the Streptomyces coelicolor small laccase T1 copper site 分子名称: COPPER (II) ION, Putative copper oxidase, TETRAETHYLENE GLYCOL 著者 Zovo, K, Majumdar, S, Lukk, T. 登録日 2021-01-04 公開日 2022-01-12 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Substitution of the Methionine Axial Ligand of the T1 Copper for the Fungal-like Phenylalanine Ligand (M298F) Causes Local Structural Perturbations that Lead to Thermal Instability and Reduced Catalytic Efficiency of the Small Laccase from Streptomyces coelicolor A3(2). Acs Omega, 7, 2022
2ZM2	Structure of 6-aminohexanoate-dimer hydrolase, A61V/A124V/R187S/F264C/G291R/G338A/D370Y mutant (Hyb-S4M94) 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-aminohexanoate-dimer hydrolase, GLYCEROL, ... 著者 Ohki, T, Shibata, N, Higuchi, Y, Kawashima, Y, Takeo, M, Kato, D, Nego, S. 登録日 2008-04-10 公開日 2009-04-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Two alternative modes for optimizing nylon-6 byproduct hydrolytic activity from a carboxylesterase with a beta-lactamase fold: X-ray crystallographic analysis of directly evolved 6-aminohexanoate-dimer hydrolase. Protein Sci., 18, 2009
6BRA	HIV-1 protease (D25N, inactive) in complex with phage display optimized substrate SGIFLETS 分子名称: CHLORIDE ION, Phage display-optimized HIV-1 protease substrate, Protease 著者 Windsor, I.W, Raines, R.T. 登録日 2017-11-30 公開日 2018-07-18 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.111 Å) 主引用文献 A substrate selected by phage display exhibits enhanced side-chain hydrogen bonding to HIV-1 protease. Acta Crystallogr D Struct Biol, 74, 2018
7EYP	Crystal structure of Pseudomonas aeruginosa ppnP 分子名称: Pyrimidine/purine nucleoside phosphorylase 著者 Wen, Y, Wu, B.X. 登録日 2021-05-31 公開日 2022-02-09 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structures of a new class of pyrimidine/purine nucleoside phosphorylase revealed a Cupin fold. Proteins, 90, 2022
7EYK	Crystal structure of Escherichia coli ppnP-Selenomethionine derived 分子名称: Pyrimidine/purine nucleoside phosphorylase 著者 Wen, Y, Wu, B.X. 登録日 2021-05-31 公開日 2022-02-09 最終更新日 2022-05-04 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Crystal structures of a new class of pyrimidine/purine nucleoside phosphorylase revealed a Cupin fold. Proteins, 90, 2022
7EYJ	Crystal structure of Escherichia coli ppnP 分子名称: Pyrimidine/purine nucleoside phosphorylase, SULFATE ION 著者 Wen, Y, Wu, B.X. 登録日 2021-05-31 公開日 2022-02-09 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Crystal structures of a new class of pyrimidine/purine nucleoside phosphorylase revealed a Cupin fold. Proteins, 90, 2022
7EYL	Crystal structure of Salmonella enterica ppnP 分子名称: Pyrimidine/purine nucleoside phosphorylase 著者 Wen, Y, Wu, B.X. 登録日 2021-05-31 公開日 2022-02-09 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Crystal structures of a new class of pyrimidine/purine nucleoside phosphorylase revealed a Cupin fold. Proteins, 90, 2022
7EYM	Crystal structure of Vibrio cholerae ppnP 分子名称: Pyrimidine/purine nucleoside phosphorylase 著者 Wen, Y, Wu, B.X. 登録日 2021-05-31 公開日 2022-02-09 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Crystal structures of a new class of pyrimidine/purine nucleoside phosphorylase revealed a Cupin fold. Proteins, 90, 2022
2ZLY	Structure of 6-aminohexanoate-dimer hydrolase, D370Y mutant 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-aminohexanoate-dimer hydrolase, GLYCEROL, ... 著者 Ohki, T, Shibata, N, Higuchi, Y, Kawashima, Y, Takeo, M, Kato, D, Negoro, S. 登録日 2008-04-10 公開日 2009-04-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Two alternative modes for optimizing nylon-6 byproduct hydrolytic activity from a carboxylesterase with a beta-lactamase fold: X-ray crystallographic analysis of directly evolved 6-aminohexanoate-dimer hydrolase. Protein Sci., 18, 2009

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