Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7DDX
DownloadVisualize
BU of 7ddx by Molmil
Crystal structure of KANK1 S1179F mutant in complex wtih eIF4A1
分子名称: Eukaryotic initiation factor 4A-I, GLYCEROL, KN motif and ankyrin repeat domains 1, ...
著者Pan, W, Xu, Y, Wei, Z.
登録日2020-10-30
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Nephrotic-syndrome-associated mutation of KANK2 induces pathologic binding competition with physiological interactor KIF21A.
J.Biol.Chem., 297, 2021
2G0A
DownloadVisualize
BU of 2g0a by Molmil
X-ray structure of mouse pyrimidine 5'-nucleotidase type 1 with lead(II) bound in active site
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Cytosolic 5'-nucleotidase III, LEAD (II) ION
著者Bitto, E, Bingman, C.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
登録日2006-02-11
公開日2006-04-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of pyrimidine 5'-nucleotidase type 1. Insight into mechanism of action and inhibition during lead poisoning.
J.Biol.Chem., 281, 2006
7Y04
DownloadVisualize
BU of 7y04 by Molmil
Hsp90-AhR-p23 complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Aryl hydrocarbon receptor, BERYLLIUM TRIFLUORIDE ION, ...
著者Wen, Z.L, Zhai, Y.J, Zhu, Y, Sun, F.
登録日2022-06-03
公開日2023-01-04
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure of the cytosolic AhR complex.
Structure, 31, 2023
5LPC
DownloadVisualize
BU of 5lpc by Molmil
Crystal structure of Vanadium-dependent Haloperoxidase from A. marina
分子名称: PHOSPHATE ION, Vanadium-dependent bromoperoxidase
著者Frank, A, Groll, M.
登録日2016-08-12
公開日2016-08-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Characterization of a Cyanobacterial Haloperoxidase and Evaluation of its Biocatalytic Halogenation Potential.
Chembiochem, 17, 2016
6I9E
DownloadVisualize
BU of 6i9e by Molmil
Thermophage P23-45 empty expanded capsid
分子名称: Auxiliary protein, Major head protein
著者Bayfield, O.W, Klimuk, E, Winkler, D.C, Hesketh, E.L, Chechik, M, Cheng, N, Dykeman, E.C, Minakhin, L, Ranson, N.A, Severinov, K, Steven, A.C, Antson, A.A.
登録日2018-11-23
公開日2019-02-06
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5EYQ
DownloadVisualize
BU of 5eyq by Molmil
Racemic crystal structures of Pribnow box consensus promoter sequence (Pnna)
分子名称: Complementary strand, Pribnow box template strand, SODIUM ION
著者Mandal, P.K, Collie, G.W, Kauffmann, B, Srivastava, S.C, Huc, I.
登録日2015-11-25
公開日2016-05-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
2G09
DownloadVisualize
BU of 2g09 by Molmil
X-ray structure of mouse pyrimidine 5'-nucleotidase type 1, product complex
分子名称: Cytosolic 5'-nucleotidase III, MAGNESIUM ION, PHOSPHATE ION, ...
著者Bitto, E, Bingman, C.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
登録日2006-02-11
公開日2006-04-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of pyrimidine 5'-nucleotidase type 1. Insight into mechanism of action and inhibition during lead poisoning.
J.Biol.Chem., 281, 2006
2G08
DownloadVisualize
BU of 2g08 by Molmil
X-ray structure of mouse pyrimidine 5'-nucleotidase type 1, product-transition complex analog with Aluminum fluoride
分子名称: ALUMINUM FLUORIDE, Cytosolic 5'-nucleotidase III, MAGNESIUM ION
著者Bitto, E, Bingman, C.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
登録日2006-02-11
公開日2006-04-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of pyrimidine 5'-nucleotidase type 1. Insight into mechanism of action and inhibition during lead poisoning.
J.Biol.Chem., 281, 2006
6NBW
DownloadVisualize
BU of 6nbw by Molmil
Ternary Complex of Beta/Gamma-Actin with Profilin and AnCoA-NAA80
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
著者Rebowski, G, Boczkowska, M, Dominguez, R.
登録日2018-12-10
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanism of actin N-terminal acetylation.
Sci Adv, 6, 2020
6NAS
DownloadVisualize
BU of 6nas by Molmil
Ternary Complex of Ac-Alpha-Actin with Profilin and AcCoA-NAA80
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETYL COENZYME *A, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Rebowski, G, Boczkowska, M, Dominguez, R.
登録日2018-12-06
公開日2020-01-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Mechanism of actin N-terminal acetylation.
Sci Adv, 6, 2020
6NBE
DownloadVisualize
BU of 6nbe by Molmil
Ternary Complex of Ac-Alpha-Actin with Profilin and CoA-NAA80
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
著者Rebowski, G, Boczkowska, M, Dominguez, R.
登録日2018-12-07
公開日2020-04-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mechanism of actin N-terminal acetylation.
Sci Adv, 6, 2020
5MHT
DownloadVisualize
BU of 5mht by Molmil
TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH HEMIMETHYLATED DNA AND ADOHCY
分子名称: DNA (5'-D(*CP*CP*AP*TP*GP*(5CM)P*GP*CP*TP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3'), PROTEIN (HHAI METHYLTRANSFERASE), ...
著者Cheng, X.
登録日1996-10-22
公開日1997-07-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A structural basis for the preferential binding of hemimethylated DNA by HhaI DNA methyltransferase.
J.Mol.Biol., 263, 1996
6WQ1
DownloadVisualize
BU of 6wq1 by Molmil
Eukaryotic LanCL2 protein
分子名称: LanC-like protein 2, ZINC ION
著者Nair, S.K, Garg, N.
登録日2020-04-28
公開日2021-05-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.295 Å)
主引用文献LanCLs add glutathione to dehydroamino acids generated at phosphorylated sites in the proteome.
Cell, 184, 2021
7U8F
DownloadVisualize
BU of 7u8f by Molmil
Ternary complex structure of Cereblon-DDB1 bound to IKZF2(ZF2) and the molecular glue DKY709
分子名称: (3S)-3-[5-(1-benzylpiperidin-4-yl)-1-oxo-1,3-dihydro-2H-isoindol-2-yl]piperidine-2,6-dione, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA damage-binding protein 1, ...
著者Ma, X, Ornelas, E, Clifton, M.C.
登録日2022-03-08
公開日2023-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Discovery and characterization of a selective IKZF2 glue degrader for cancer immunotherapy.
Cell Chem Biol, 30, 2023
3CQ8
DownloadVisualize
BU of 3cq8 by Molmil
Ternary complex of the L415F mutant RB69 exo(-)polymerase
分子名称: CALCIUM ION, DNA (5'-D(*DAP*DCP*DAP*DGP*DGP*DTP*DAP*DAP*DGP*DCP*DAP*DGP*DTP*DCP*DCP*DGP*DCP*DG)-3'), DNA (5'-D(*DGP*DCP*DGP*DGP*DAP*DCP*DTP*DGP*DCP*DTP*DTP*DAP*DCP*DC)-3'), ...
著者Zhong, X, Pedersen, L.C, Kunkel, T.A.
登録日2008-04-02
公開日2008-09-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Characterization of a replicative DNA polymerase mutant with reduced fidelity and increased translesion synthesis capacity.
Nucleic Acids Res., 36, 2008
2V8W
DownloadVisualize
BU of 2v8w by Molmil
Crystallographic and mass spectrometric characterisation of eIF4E with N7-cap derivatives
分子名称: EUKARYOTIC TRANSLATION INITIATION FACTOR 4E, EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-BINDING PROTEIN 1, [[(2R,3S,4R,5R)-5-(6-AMINO-3-METHYL-4-OXO-5H-IMIDAZO[4,5-C]PYRIDIN-1-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHOXY-HYDROXY-PHOSPHORYL] PHOSPHONO HYDROGEN PHOSPHATE
著者Brown, C.J, Mcnae, I, Fischer, P.M, Walkinshaw, M.D.
登録日2007-08-16
公開日2007-08-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystallographic and Mass Spectrometric Characterisation of Eif4E with N(7)-Alkylated CAP Derivatives.
J.Mol.Biol., 372, 2007
2V8Y
DownloadVisualize
BU of 2v8y by Molmil
Crystallographic and mass spectrometric characterisation of eIF4E with N7-cap derivatives
分子名称: EUKARYOTIC TRANSLATION INITIATION FACTOR 4E, EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-BINDING PROTEIN 1, P-FLUORO-7-BENZYL GUANINE MONOPHOSPHATE
著者Brown, C.J, Mcnae, I, Fischer, P.M, Walkinshaw, M.D.
登録日2007-08-16
公開日2007-08-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic and Mass Spectrometric Characterisation of Eif4E with N(7)-Alkylated CAP Derivatives.
J.Mol.Biol., 372, 2007
1CSN
DownloadVisualize
BU of 1csn by Molmil
BINARY COMPLEX OF CASEIN KINASE-1 WITH MGATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CASEIN KINASE-1, MAGNESIUM ION, ...
著者Xu, R.-M, Cheng, X.
登録日1995-04-25
公開日1995-07-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of casein kinase-1, a phosphate-directed protein kinase.
EMBO J., 14, 1995
1DKW
DownloadVisualize
BU of 1dkw by Molmil
CRYSTAL STRUCTURE OF TRIOSE-PHOSPHATE ISOMERASE WITH MODIFIED SUBSTRATE BINDING SITE
分子名称: TERTIARY-BUTYL ALCOHOL, TRIOSEPHOSPHATE ISOMERASE
著者Norledge, B.V, Lambeir, A.M, Abagyan, R.A, Rottman, A, Fernandez, A.M, Filimonov, V.V, Peter, M.G, Wierenga, R.K.
登録日1999-12-08
公開日2000-11-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Modeling, mutagenesis, and structural studies on the fully conserved phosphate-binding loop (loop 8) of triosephosphate isomerase: toward a new substrate specificity.
Proteins, 42, 2001
7V7L
DownloadVisualize
BU of 7v7l by Molmil
Crystal Structure of the Heterodimeric HIF-3a:ARNT Complex
分子名称: Aryl hydrocarbon receptor nuclear translocator, Hypoxia-inducible factor 3-alpha
著者Diao, X, Ren, X, Li, F.W, Sun, X, Wu, D.
登録日2021-08-21
公開日2022-05-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Identification of oleoylethanolamide as an endogenous ligand for HIF-3 alpha.
Nat Commun, 13, 2022
5F26
DownloadVisualize
BU of 5f26 by Molmil
Crystal structures of Pribnow box consensus promoter sequence (P63)
分子名称: Complementary strand, Pribnow box consensus sequence strand
著者Mandal, P.K, Collie, G.W, Kauffmann, B, Srivastava, S.C, Huc, I.
登録日2015-12-01
公開日2016-05-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
4IUL
DownloadVisualize
BU of 4iul by Molmil
MIF4G domain of DAP5
分子名称: Eukaryotic translation initiation factor 4 gamma 2, SULFATE ION
著者Frank, F, Virgili, G, Feoktistova, K, Sawicki, M, Sonenberg, N, Fraser, C, Nagar, B.
登録日2013-01-21
公開日2013-03-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Analysis of the DAP5 MIF4G Domain and Its Interaction with eIF4A.
Structure, 21, 2013
4QW8
DownloadVisualize
BU of 4qw8 by Molmil
TERNARY CRYSTAL STRUCTURES of A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND D-DCTP
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(P*CP*AP*GP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3'), ...
著者Gaur, V, Suo, Z.
登録日2014-07-16
公開日2014-08-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structural and kinetic insights into binding and incorporation of L-nucleotide analogs by a Y-family DNA polymerase.
Nucleic Acids Res., 42, 2014
4QWA
DownloadVisualize
BU of 4qwa by Molmil
TERNARY CRYSTAL STRUCTURES OF A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS in COMPLEX WITH DNA AND (-)3TC-DP
分子名称: CALCIUM ION, DNA (5'-D(P*CP*AP*GP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3'), DNA (5'-D(P*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*C)-3'), ...
著者Gaur, V, Suo, Z.
登録日2014-07-16
公開日2014-08-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and kinetic insights into binding and incorporation of L-nucleotide analogs by a Y-family DNA polymerase.
Nucleic Acids Res., 42, 2014
4QW9
DownloadVisualize
BU of 4qw9 by Molmil
TERNARY CRYSTAL STRUCTURES of A Y-FAMILY DNA POLYMERASE DPO4 FROM SULFOLOBUS SOLFATARICUS IN COMPLEX WITH DNA AND (-)FTC-PPNP
分子名称: CALCIUM ION, DNA (5'-D(P*CP*AP*GP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3'), DNA (5'-D(P*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*C)-3'), ...
著者Gaur, V, Suo, Z.
登録日2014-07-16
公開日2014-08-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and kinetic insights into binding and incorporation of L-nucleotide analogs by a Y-family DNA polymerase.
Nucleic Acids Res., 42, 2014

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon