PDB: 71589 件ウェブページステータス検索Chemie searchBIRD

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5J0G	Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form, circular permutant P7/8 分子名称: OXIDOREDUCTASE,Superoxide dismutase [Cu-Zn] 著者 Wang, H, Lang, L, Logan, D, Danielsson, J, Oliveberg, M. 登録日 2016-03-28 公開日 2017-02-01 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Tricking a Protein To Swap Strands. J. Am. Chem. Soc., 138, 2016
2BG1	Active site restructuring regulates ligand recognition in classA Penicillin-binding proteins (PBPs) 分子名称: CHLORIDE ION, PENICILLIN-BINDING PROTEIN 1B, SULFATE ION 著者 Macheboeuf, P, Di Guilmi, A.M, Job, V, Vernet, T, Dideberg, O, Dessen, A. 登録日 2004-12-16 公開日 2005-03-11 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Active Site Restructuring Regulates Ligand Recognition in Class a Penicillin-Binding Proteins Proc.Natl.Acad.Sci.USA, 102, 2005
2BST	Crystal structures and KIR3DL1 recognition of three immunodominant viral peptides complexed to HLA-B2705 分子名称: BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-27 ALPHA CHAIN PRECURSOR, ... 著者 Stewart-Jones, G.B.E, diGleria, K, Kollnberger, S, McMichael, A.J, Bowness, P, Jones, E.Y. 登録日 2005-05-23 公開日 2005-05-24 最終更新日 2015-05-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structures and Kir3Dl1 Recognition of Three Immunodominant Viral Peptides Complexed to Hla-B2705 Eur.J.Immunol., 35, 2005
5FO0	D298E mutant of FAD synthetase from Corynebacterium ammoniagenes 分子名称: PYROPHOSPHATE, RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF, SULFATE ION 著者 Martinez-Julvez, M, Herguedas, B, Milagros, M. 登録日 2015-11-17 公開日 2016-11-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 The trimer interface in the quaternary structure of the bifunctional prokaryotic FAD synthetase from Corynebacterium ammoniagenes. Sci Rep, 7, 2017
4XYG	GRANULICELLA M. FORMATE DEHYDROGENASE (FDH) 分子名称: Formate dehydrogenase 著者 Cendron, L, Fogal, S, Beneventi, E, Bergantino, E. 登録日 2015-02-02 公開日 2015-07-08 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural basis for double cofactor specificity in a new formate dehydrogenase from the acidobacterium Granulicella mallensis MP5ACTX8. Appl.Microbiol.Biotechnol., 99, 2015
2C3A	Structure of unliganded HSV gD reveals a mechanism for receptor- mediated activation of virus entry 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCOPROTEIN D, ... 著者 Krummenacher, C, Supekar, V.M, Whitbeck, J.C, Lazear, E, Connolly, S.A, Eisenberg, R.J, Cohen, G.H, Wiley, D.C, Carfi, A. 登録日 2005-10-05 公開日 2005-12-21 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of Unliganded Hsv Gd Reveals a Mechanism for Receptor-Mediated Activation of Virus Entry. Embo J., 24, 2005
4XYB	GRANULICELLA M. FORMATE DEHYDROGENASE (FDH) IN COMPLEX WITH NADP(+) AND NaN3 分子名称: 1,2-ETHANEDIOL, AZIDE ION, Formate dehydrogenase, ... 著者 Cendron, L, Fogal, S, Beneventi, E, Bergantino, E. 登録日 2015-02-02 公開日 2015-07-08 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Structural basis for double cofactor specificity in a new formate dehydrogenase from the acidobacterium Granulicella mallensis MP5ACTX8. Appl.Microbiol.Biotechnol., 99, 2015
5FOZ	De novo structure of the binary mosquito larvicide BinAB at pH 10 分子名称: LARVICIDAL TOXIN PROTEIN, SODIUM ION, TOXIN 著者 Colletier, J.P, Sawaya, M.R, Gingery, M, Rodriguez, J.A, Cascio, D, Brewster, A.S, Michels-Clark, T, Boutet, S, Williams, G.J, Messerschmidt, M, DePonte, D.P, Sierra, R.G, Laksmono, H, Koglin, J.E, Hunter, M.S, W Park, H, Uervirojnangkoorn, M, Bideshi, D.L, Brunger, A.T, Federici, B.A, Sauter, N.K, Eisenberg, D.S. 登録日 2015-11-26 公開日 2016-10-05 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 De Novo Phasing with X-Ray Laser Reveals Mosquito Larvicide Binab Structure. Nature, 539, 2016
7NTN	The structure of RRM domain of human TRMT2A at 2 A resolution 分子名称: CHLORIDE ION, SODIUM ION, SULFATE ION, ... 著者 Davydova, E, Janowski, R, Witzenberger, M, Niessing, D. 登録日 2021-03-10 公開日 2022-01-19 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (2.016 Å) 主引用文献 Small-molecule modulators of TRMT2A decrease PolyQ aggregation and PolyQ-induced cell death. Comput Struct Biotechnol J, 20, 2022
4XR2	Escherichia Coli Replication Terminator Protein (Tus) H114A mutant Complexed With DNA- TerA lock. 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, DNA (5'-D(*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*C)-3'), ... 著者 Oakley, A.J. 登録日 2015-01-20 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Replisome speed determines the efficiency of the Tus-Ter replication termination barrier. Nature, 525, 2015
1FEU	CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA. 分子名称: 19 NT FRAGMENT OF 5S RRNA, 21 NT FRAGMENT OF 5S RRNA, 50S RIBOSOMAL PROTEIN L25, ... 著者 Fedorov, R.V, Meshcheryakov, V.A, Gongadze, G.M, Fomenkova, N.P, Nevskaya, N.A, Selmer, M, Laurberg, M, Kristensen, O, Al-Karadaghi, S, Liljas, A, Garber, M.B, Nikonov, S.V. 登録日 2000-07-23 公開日 2001-06-25 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of ribosomal protein TL5 complexed with RNA provides new insights into the CTC family of stress proteins. Acta Crystallogr.,Sect.D, 57, 2001
1K6T	LACK OF SYNERGY FOR INHIBITORS TARGETING A MULTI-DRUG RESISTANT HIV-1 PROTEASE 分子名称: ACETATE ION, N-[2-HYDROXY-1-INDANYL]-5-[(2-TERTIARYBUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4-HYDROXY-2-(1-PHENYLETHYL)-PEN TANAMIDE, POL polyprotein 著者 Schiffer, C.A. 登録日 2001-10-17 公開日 2002-02-06 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Lack of synergy for inhibitors targeting a multi-drug-resistant HIV-1 protease. Protein Sci., 11, 2002
4XQS	Crystal structure of human FPPS in complex with one magnesium ion 分子名称: Farnesyl pyrophosphate synthase, MAGNESIUM ION, SULFATE ION 著者 Park, J, Berghuis, A.M. 登録日 2015-01-20 公開日 2016-01-20 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of human FPPS in complex with one magnesium ion To Be Published
4XR3	Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- GC(6) swapped. 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*TP*AP*CP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*GP*T)-3'), ... 著者 Oakley, A.J. 登録日 2015-01-20 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Replisome speed determines the efficiency of the Tus-Ter replication termination barrier. Nature, 525, 2015
5JA0	Crystal structure of human FPPS with allosterically bound FPP 分子名称: FARNESYL DIPHOSPHATE, Farnesyl pyrophosphate synthase, PHOSPHATE ION 著者 Park, J, Zielinski, M, Tsantrizos, Y.S, Berghuis, A.M. 登録日 2016-04-11 公開日 2017-01-25 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Human farnesyl pyrophosphate synthase is allosterically inhibited by its own product. Nat Commun, 8, 2017
1K6V	LACK OF SYNERGY FOR INHIBITORS TARGETING A MULTI-DRUG RESISTANT HIV-1 PROTEASE 分子名称: ACETATE ION, N-[2-HYDROXY-1-INDANYL]-5-[(2-TERTIARYBUTYLAMINOCARBONYL)-4(BENZO[1,3]DIOXOL-5-YLMETHYL)-PIPERAZINO]-4-HYDROXY-2-(1-PHE NYLETHYL)-PENTANAMIDE, POL polyprotein 著者 Schiffer, C.A. 登録日 2001-10-17 公開日 2002-02-06 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Lack of synergy for inhibitors targeting a multi-drug-resistant HIV-1 protease. Protein Sci., 11, 2002
7ODL	SARS CoV-2 Spike protein, Bristol UK Deletion variant, Closed conformation, C1 symmetry 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, LINOLEIC ACID, Spike glycoprotein 著者 Toelzer, C, Gupta, K, Yadav, S.K.N, Borucu, U, Schaffitzel, C, Berger, I. 登録日 2021-04-29 公開日 2022-01-26 実験手法 ELECTRON MICROSCOPY (3.03 Å) 主引用文献 Structural insights in cell-type specific evolution of intra-host diversity by SARS-CoV-2. Nat Commun, 13, 2022
7OD3	SARS CoV-2 Spike protein, Bristol UK Deletion variant, Closed conformation, C3 symmetry 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, LINOLEIC ACID, Spike glycoprotein 著者 Toelzer, C, Gupta, K, Yadav, S.K.N, Borucu, U, Schaffitzel, C, Berger, I. 登録日 2021-04-28 公開日 2022-01-26 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural insights in cell-type specific evolution of intra-host diversity by SARS-CoV-2. Nat Commun, 13, 2022
2BVX	Design and Discovery of Novel, Potent Thrombin Inhibitors with a Solubilizing Cationic P1-P2-Linker 分子名称: ALPHA THROMBIN, HIRUDIN VARIANT-2, N-(5-CHLORO-BENZO[B]THIOPHEN-3-YLMETHYL)-2-[6-CHLORO-OXO-3-(2-PYRIDIN-2-YL-ETHYLAMINO)-2H-PYRAZIN-1-YL]-ACETAMIDE 著者 Bulat, S, Bosio, S, Grabowski, E, Papadopoulos, M.A, Cerezo-Galvez, S, Rosenbaum, C, Matassa, V.G, Ott, I, Metz, G, Schamberger, J, Sekul, R, Feurer, A. 登録日 2005-07-04 公開日 2006-10-25 最終更新日 2016-12-21 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Design and Discovery of Novel, Potent Pyrazinone-Based Thrombin Inhibitors with a Solubilizing P1-P2-Linker Lett.Drug Des.Discovery, 3, 2006
4XYE	GRANULICELLA M. FORMATE DEHYDROGENASE (FDH) IN COMPLEX WITH NAD(+) 分子名称: Formate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Cendron, L, Fogal, S, Beneventi, E, Bergantino, E. 登録日 2015-02-02 公開日 2015-07-08 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis for double cofactor specificity in a new formate dehydrogenase from the acidobacterium Granulicella mallensis MP5ACTX8. Appl.Microbiol.Biotechnol., 99, 2015
4Y10	Trypsin in complex with with BPTI mutant (2S)-2-amino-4,4-difluorobutanoic acid 分子名称: CALCIUM ION, Cationic trypsin, GLYCEROL, ... 著者 Loll, B, Ye, S, Berger, A.A, Muelow, U, Alings, C, Wahl, M.C, Koksch, B. 登録日 2015-02-06 公開日 2015-06-24 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.37 Å) 主引用文献 Fluorine teams up with water to restore inhibitor activity to mutant BPTI. Chem Sci, 6, 2015
4Y11	Trypsin in complex with with BPTI mutant (2S)-2-amino-4,4,4-trifluorobutanoic acid 分子名称: CALCIUM ION, Cationic trypsin, GLYCEROL, ... 著者 Loll, B, Ye, S, Berger, A.A, Muelow, U, Alings, C, Wahl, M.C, Koksch, B. 登録日 2015-02-06 公開日 2015-06-24 最終更新日 2018-04-18 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Fluorine teams up with water to restore inhibitor activity to mutant BPTI. Chem Sci, 6, 2015
1FCH	CRYSTAL STRUCTURE OF THE PTS1 COMPLEXED TO THE TPR REGION OF HUMAN PEX5 分子名称: PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR, PTS1-CONTAINING PEPTIDE 著者 Gatto Jr, G.J, Geisbrecht, B.V, Gould, S.J, Berg, J.M. 登録日 2000-07-18 公開日 2000-12-06 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Peroxisomal targeting signal-1 recognition by the TPR domains of human PEX5. Nat.Struct.Biol., 7, 2000
5GT2	Crystal Structure and Biochemical Features of dye-decolorizing peroxidase YfeX from Escherichia coli O157 分子名称: PROTOPORPHYRIN IX CONTAINING FE, Probable deferrochelatase/peroxidase YfeX 著者 Ma, Y.L, Yuan, Z.G, Liu, S, Wang, J.X, Gu, L.C, Liu, X.H. 登録日 2016-08-18 公開日 2017-02-08 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.093 Å) 主引用文献 Crystal structure and biochemical features of dye-decolorizing peroxidase YfeX from Escherichia coli O157 Asp(143) and Arg(232) play divergent roles toward different substrates Biochem. Biophys. Res. Commun., 484, 2017
5GUI	Crystal structure of the N-terminal Domain of Caseinolytic protease associated chaperone ClpC1 from Arabidopsis thaliana 分子名称: Chaperone protein ClpC1, chloroplastic, PHOSPHATE ION 著者 Jagdev, M.K, Vasudevan, D. 登録日 2016-08-29 公開日 2017-03-22 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Crystal structures reveal N-terminal Domain of Arabidopsis thaliana ClpD to be highly divergent from that of ClpC1. Sci Rep, 7, 2017

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