PDB: 55616 件ウェブページステータス検索Chemie searchBIRD

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7BJF	14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-069 分子名称: (5-methyl-2-nitro-phenyl) cyclobutanecarboxylate, 14-3-3 protein sigma, CHLORIDE ION, ... 著者 Wolter, M, Ottmann, C. 登録日 2021-01-14 公開日 2021-06-09 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach. J.Med.Chem., 64, 2021
7BKH	14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-153 分子名称: 14-3-3 protein sigma, 4-nitro-3-[(3S)-3-oxidanylpiperidin-1-yl]benzaldehyde, Transcription factor p65 著者 Wolter, M, Ottmann, C. 登録日 2021-01-16 公開日 2021-06-09 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach. J.Med.Chem., 64, 2021
7BI3	14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-179 分子名称: 14-3-3 protein sigma, 4-[(6-methoxy-3,4-dihydro-2~{H}-quinolin-1-yl)sulfonyl]benzaldehyde, CALCIUM ION, ... 著者 Wolter, M, Ottmann, C. 登録日 2021-01-12 公開日 2021-06-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach. J.Med.Chem., 64, 2021
7BIY	14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-175 分子名称: 1-(4-methanoylphenyl)carbonylpiperidine-4-carbonitrile, 14-3-3 protein sigma, CHLORIDE ION, ... 著者 Wolter, M, Ottmann, C. 登録日 2021-01-13 公開日 2021-06-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach. J.Med.Chem., 64, 2021
8FO9	Cryo-EM structure of Rab29-LRRK2 complex in the LRRK2 tetramer state 分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 2, ... 著者 Zhu, H, Sun, J. 登録日 2022-12-30 公開日 2024-01-03 実験手法 ELECTRON MICROSCOPY (3.48 Å) 主引用文献 Rab29-dependent asymmetrical activation of leucine-rich repeat kinase 2. Science, 382, 2023
6AQP	Aspergillus fumigatus Cytosolic Thiolase: Acetylated enzyme in complex with CoA and potassium ions 分子名称: ACETYL COENZYME *A, Acetyl-CoA acetyltransferase, CHLORIDE ION, ... 著者 Marshall, A.C, Bond, C.S, Bruning, J.B. 登録日 2017-08-21 公開日 2018-05-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of Aspergillus fumigatus Cytosolic Thiolase: Trapped Tetrahedral Reaction Intermediates and Activation by Monovalent Cations Acs Catalysis, 8(3), 2018
5WNY	DNA polymerase beta substrate complex with incoming 5-FdUTP 分子名称: 2'-deoxy-5-fluorouridine 5'-(tetrahydrogen triphosphate), CALCIUM ION, CHLORIDE ION, ... 著者 Schaich, M.A, Smith, M.R, Cloud, A.S, Holloran, S.M, Freudenthal, B.D. 登録日 2017-08-01 公開日 2017-09-13 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structures of a DNA Polymerase Inserting Therapeutic Nucleotide Analogues. Chem. Res. Toxicol., 30, 2017
2VPW	Polysulfide reductase with bound menaquinone 分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, HYPOTHETICAL MEMBRANE SPANNING PROTEIN, IRON/SULFUR CLUSTER, ... 著者 Jormakka, M, Yokoyama, K, Yano, T, Tamakoshi, M, Akimoto, S, Shimamura, T, Curmi, P, Iwata, S. 登録日 2008-03-09 公開日 2008-06-10 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Molecular Mechanism of Energy Conservation in Polysulfide Respiration. Nat.Struct.Mol.Biol., 15, 2008
2VPY	Polysulfide reductase with bound quinone inhibitor, pentachlorophenol (PCP) 分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, HYPOTHETICAL MEMBRANE SPANNING PROTEIN, IRON/SULFUR CLUSTER, ... 著者 Jormakka, M, Yokoyama, K, Yano, T, Tamakoshi, M, Akimoto, S, Shimamura, T, Curmi, P, Iwata, S. 登録日 2008-03-09 公開日 2008-06-10 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Molecular Mechanism of Energy Conservation in Polysulfide Respiration. Nat.Struct.Mol.Biol., 15, 2008
3RHP	Crystal structure of the C707A mutant of the C-Terminal domain of 10'FORMYLTETRAHYDROFOLATE DEHYDROGENASE 分子名称: Aldehyde dehydrogenase 1 family, member L1, GLYCEROL, ... 著者 Tsybovsky, Y. 登録日 2011-04-11 公開日 2011-05-04 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Conserved catalytic residues of the ALDH1L1 aldehyde dehydrogenase domain control binding and discharging of the coenzyme. J.Biol.Chem., 286, 2011
6BCY	Complex of 14-3-3 theta with an IRSp53 peptide phosphorylated at T360 分子名称: 14-3-3 protein theta, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, DI(HYDROXYETHYL)ETHER, ... 著者 Kast, D.J, Dominguez, R. 登録日 2017-10-20 公開日 2018-10-24 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Mechanism of IRSp53 inhibition by 14-3-3. Nat Commun, 10, 2019
7EBC	Crystal structure of Isocitrate lyase-1 from Saccaromyces cervisiae 分子名称: Isocitrate lyase, MAGNESIUM ION, TETRAETHYLENE GLYCOL 著者 Hiragi, K, Nishio, K, Moriyama, S, Hamaguchi, T, Mizoguchi, A, Yonekura, K, Tani, K, Mizushima, T. 登録日 2021-03-09 公開日 2021-06-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural insights into the targeting specificity of ubiquitin ligase for S. cerevisiae isocitrate lyase but not C. albicans isocitrate lyase. J.Struct.Biol., 213, 2021
1Q10	Ensemble of 40 Structures of the Dimeric Mutant of the B1 Domain of Streptococcal Protein G 分子名称: Immunoglobulin G binding protein G 著者 Byeon, I.J, Louis, J.M, Gronenborn, A.M. 登録日 2003-07-18 公開日 2003-10-14 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 A Protein Contortionist: Core Mutations of GB1 that Induce Dimerization and Domain Swapping J.Mol.Biol., 333, 2003
6ARG	Aspergillus fumigatus Cytosolic Thiolase: Apo enzyme in complex with rubidium ions 分子名称: Acetyl-CoA acetyltransferase, CHLORIDE ION, GLYCEROL, ... 著者 Marshall, A.C, Bond, C.S, Bruning, J.B. 登録日 2017-08-22 公開日 2018-05-30 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.782 Å) 主引用文献 Structure of Aspergillus fumigatus Cytosolic Thiolase: Trapped Tetrahedral Reaction Intermediates and Activation by Monovalent Cations Acs Catalysis, 8(3), 2018
6ARF	Aspergillus fumigatus Cytosolic Thiolase: Apo enzyme in complex with potassium ions 分子名称: Acetyl-CoA acetyltransferase, CHLORIDE ION, GLYCEROL, ... 著者 Marshall, A.C, Bond, C.S, Bruning, J.B. 登録日 2017-08-22 公開日 2018-05-30 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.702 Å) 主引用文献 Structure of Aspergillus fumigatus Cytosolic Thiolase: Trapped Tetrahedral Reaction Intermediates and Activation by Monovalent Cations Acs Catalysis, 8(3), 2018
5WNZ	DNA polymerase beta substrate complex with incoming 5-FodCTP 分子名称: 2'-deoxy-5-formylcytidine 5'-(tetrahydrogen triphosphate), CALCIUM ION, CHLORIDE ION, ... 著者 Schaich, M.A, Smith, M.R, Cloud, A.S, Holloran, S.M, Freudenthal, B.D. 登録日 2017-08-01 公開日 2017-09-13 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structures of a DNA Polymerase Inserting Therapeutic Nucleotide Analogues. Chem. Res. Toxicol., 30, 2017
5WO0	DNA polymerase beta substrate complex with incoming 5-FodUTP 分子名称: 2'-deoxy-5-formyluridine 5'-(tetrahydrogen triphosphate), CALCIUM ION, CHLORIDE ION, ... 著者 Schaich, M.A, Smith, M.R, Cloud, A.S, Holloran, S.M, Freudenthal, B.D. 登録日 2017-08-01 公開日 2017-09-13 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structures of a DNA Polymerase Inserting Therapeutic Nucleotide Analogues. Chem. Res. Toxicol., 30, 2017
6BVF	Cryo-EM Structure of Hepatitis B virus T=4 capsid in complex with the fluorescent allosteric modulator HAP-TAMRA 分子名称: Capsid protein, Heteroaryldihydropyrimidine tetramethylrodamine 著者 Schlicksup, C, Wang, J.C, Zlotnick, A. 登録日 2017-12-12 公開日 2018-02-07 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Hepatitis B virus core protein allosteric modulators can distort and disrupt intact capsids. Elife, 7, 2018
5YLX	Integrated illustration of a valid epitope based on the SLA class I structure and tetramer technique could carry forward the development of molecular vaccine in swine species 分子名称: Beta-2-microglobulin, MHC class I antigen, PRRSV-NSP9-TMP9 peptide 著者 Pan, X.C, Wei, X.H, Zhang, N, Xia, C. 登録日 2017-10-20 公開日 2018-10-24 最終更新日 2020-05-06 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Illumination of PRRSV Cytotoxic T Lymphocyte Epitopes by the Three-Dimensional Structure and Peptidome of Swine Lymphocyte Antigen Class I (SLA-I). Front Immunol, 10, 2019
7VD6	Structure of S1M1-type FCPII complex from diatom 分子名称: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ... 著者 Nagao, R, Kato, K, Akita, F, Miyazaki, N, Shen, J.R. 登録日 2021-09-06 公開日 2022-03-02 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural basis for different types of hetero-tetrameric light-harvesting complexes in a diatom PSII-FCPII supercomplex Nat Commun, 13, 2022
7VD5	Structure of C2S2M2-type PSII-FCPII supercomplex from diatom 分子名称: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ... 著者 Nagao, R, Kato, K, Akita, F, Miyazaki, N, Shen, J.R. 登録日 2021-09-06 公開日 2022-03-02 最終更新日 2022-09-14 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Structural basis for different types of hetero-tetrameric light-harvesting complexes in a diatom PSII-FCPII supercomplex Nat Commun, 13, 2022
6C52	Cross-alpha Amyloid-like Structure alphaTet 分子名称: Cross-alpha Amyloid-like Structure alphaTet, GLYCEROL 著者 Liu, L, Zhang, S.Q. 登録日 2018-01-13 公開日 2018-08-15 最終更新日 2020-01-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Designed peptides that assemble into cross-alpha amyloid-like structures. Nat. Chem. Biol., 14, 2018
7BIW	14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-187 分子名称: 14-3-3 protein sigma, 4-(3,4-dihydro-2~{H}-quinoxalin-1-ylsulfonyl)benzaldehyde, CALCIUM ION, ... 著者 Wolter, M, Ottmann, C. 登録日 2021-01-13 公開日 2021-09-15 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach. J.Med.Chem., 64, 2021
7BJB	14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-044 分子名称: 14-3-3 protein sigma, 4-(4-methylphenyl)sulfonylmorpholine, CALCIUM ION, ... 著者 Wolter, M, Ottmann, C. 登録日 2021-01-14 公開日 2021-09-15 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach. J.Med.Chem., 64, 2021
3SDX	Crystal structure of human autoreactive-Valpha24 NKT TCR in complex with CD1d-beta-galactosylceramide 分子名称: Antigen-presenting glycoprotein CD1d, Beta-2-microglobulin, N-[(2S,3R)-1-(beta-D-galactopyranosyloxy)-3-hydroxyoctadec-4-en-2-yl]tetracosanamide, ... 著者 Clarke, A.J, Patel, O, Rossjohn, J. 登録日 2011-06-09 公開日 2011-10-05 実験手法 X-RAY DIFFRACTION (3.12 Å) 主引用文献 Recognition of beta-linked self glycolipids mediated by natural killer T cell antigen receptors Nat.Immunol., 12, 2011

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