Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2BGM
DownloadVisualize
BU of 2bgm by Molmil
X-Ray structure of ternary-Secoisolariciresinol Dehydrogenase
分子名称: MATAIRESINOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), RHIZOME SECOISOLARICIRESINOL DEHYDROGENASE
著者Youn, B, Moinuddin, S.G, Davin, L.B, Lewis, N.G, Kang, C.
登録日2004-12-23
公開日2005-01-13
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of Apo-Form and Binary/Ternary Complexes of Podophyllum Secoisolariciresinol Dehydrogenase, an Enzyme Involved in Formation of Health-Protecting and Plant Defense Lignans
J.Biol.Chem., 280, 2005
7QGF
DownloadVisualize
BU of 7qgf by Molmil
Cubic Insulin SAD phasing at 14.2 keV
分子名称: Insulin A chain, Insulin B chain
著者Nanao, M.H, Basu, S.
登録日2021-12-08
公開日2022-06-01
実験手法X-RAY DIFFRACTION (1.203 Å)
主引用文献ID23-2: an automated and high-performance microfocus beamline for macromolecular crystallography at the ESRF.
J.Synchrotron Radiat., 29, 2022
5AKR
DownloadVisualize
BU of 5akr by Molmil
ATOMIC RESOLUTION STRUCTURE OF NITRITE BOUND STATE OF THE ACHROMOBACTER CYCLOCLASTES CU NITRITE REDUCTASE AT 0.87 A RESOLUTION
分子名称: ACETATE ION, COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, ...
著者Blakeley, M.P, Hasnain, S.S, Antonyuk, S.V.
登録日2015-03-05
公開日2015-07-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (0.87 Å)
主引用文献Sub-Atomic Resolution X-Ray Crystallography and Neutron Crystallography: Promise, Challenges and Potential.
Iucrj, 2, 2015
3ZS5
DownloadVisualize
BU of 3zs5 by Molmil
Structural basis for kinase selectivity of three clinical p38alpha inhibitors
分子名称: 1,2-ETHANEDIOL, 4-[5-(4-FLUORO-PHENYL)-2-(4-METHANESULFINYL-PHENYL)-3H-IMIDAZOL-4-YL]-PYRIDINE, MITOGEN-ACTIVATED PROTEIN KINASE 14, ...
著者Azevedo, R, van Zeeland, M, Raaijmakers, H.C.A, Kazemier, B, Oubrie, A.
登録日2011-06-23
公開日2012-07-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-ray structure of p38 alpha bound to TAK-715: comparison with three classic inhibitors.
Acta Crystallogr. D Biol. Crystallogr., 68, 2012
3ZCG
DownloadVisualize
BU of 3zcg by Molmil
Ascorbate peroxidase W41A-H42C mutant
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ASCORBATE PEROXIDASE, POTASSIUM ION, ...
著者Gumiero, A, Raven, E.L, Moody, P.C.E.
登録日2012-11-20
公開日2012-12-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.491 Å)
主引用文献Probing the Conformational Mobility of the Active Site of a Heme Peroxidase.
Dalton Trans, 42, 2013
1NY3
DownloadVisualize
BU of 1ny3 by Molmil
Crystal structure of ADP bound to MAP KAP kinase 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAP kinase-activated protein kinase 2
著者Underwood, K.W, Parris, K.D, Federico, E, Mosyak, L, Shane, T, Taylor, M, Svenson, K, Liu, Y, Hsiao, C.L, Wolfrom, S, Maguire, M, Malakian, K, Telliez, J.B, Lin, L.L, Kriz, R.W, Seehra, J, Somers, W.S, Stahl, M.L.
登録日2003-02-11
公開日2003-10-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Catalytically active MAP KAP kinase 2 structures in complex with staurosporine and ADP reveal differences with the autoinhibited enzyme
Structure, 11, 2003
1NXK
DownloadVisualize
BU of 1nxk by Molmil
Crystal structure of staurosporine bound to MAP KAP kinase 2
分子名称: MAP kinase-activated protein kinase 2, STAUROSPORINE, SULFATE ION
著者Underwood, K.W, Parris, K.D, Federico, E, Mosyak, L, Czerwinski, R.M, Shane, T, Taylor, M, Svenson, K, Liu, Y, Hsiao, C.L, Wolfrom, S, Malakian, K, Telliez, J.B, Lin, L.L, Kriz, R.W, Seehra, J, Somers, W.S, Stahl, M.L.
登録日2003-02-10
公開日2003-10-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Catalytically active MAP KAP kinase 2 structures in complex with staurosporine and ADP reveal differences with the autoinhibited enzyme
Structure, 11, 2003
5FW4
DownloadVisualize
BU of 5fw4 by Molmil
Structure of Thermobifida fusca DyP-type Peroxidase and Activity towards Kraft Lignin and Lignin Model Compounds
分子名称: DYE-DECOLORIZING PEROXIDASE TFU_3078, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
著者Rahmanpour, R, Rea, D, Jamshidi, S, Fulop, V, Bugg, T.D.H.
登録日2016-02-11
公開日2016-04-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of Thermobifida Fusca Dyp-Type Peroxidase and Activity Towards Kraft Lignin and Lignin Model Compounds.
Arch.Biochem.Biophys., 594, 2016
3F3R
DownloadVisualize
BU of 3f3r by Molmil
Crystal structure of yeast Thioredoxin1-glutathione mixed disulfide complex
分子名称: GLUTATHIONE, SULFATE ION, Thioredoxin-1
著者Zhang, Y.R, Bao, R, Zhou, C.Z, Chen, Y.X.
登録日2008-10-31
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and kinetic analysis of Saccharomyces cerevisiae thioredoxin Trx1: implications for the catalytic mechanism of GSSG reduced by the thioredoxin system
Biochim.Biophys.Acta, 1794, 2009
3F3Q
DownloadVisualize
BU of 3f3q by Molmil
Crystal structure of the oxidised form of thioredoxin 1 from saccharomyces cerevisiae
分子名称: Thioredoxin-1, ZINC ION
著者Zhang, Y.R, Bao, R, Zhou, C.Z, Chen, Y.X.
登録日2008-10-31
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structural and kinetic analysis of Saccharomyces cerevisiae thioredoxin Trx1: implications for the catalytic mechanism of GSSG reduced by the thioredoxin system
Biochim.Biophys.Acta, 1794, 2009
4ATH
DownloadVisualize
BU of 4ath by Molmil
MITF apo structure
分子名称: MICROPHTHALMIA-ASSOCIATED TRANSCRIPTION FACTOR, SULFATE ION
著者Pogenberg, V, Milewski, M, Wilmanns, M.
登録日2012-05-08
公開日2012-12-12
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Restricted Leucine Zipper Dimerization and Specificity of DNA Recognition of the Melanocyte Master Regulator Mitf
Genes Dev., 26, 2012
3VJF
DownloadVisualize
BU of 3vjf by Molmil
Crystal structure of de novo 4-helix bundle protein WA20
分子名称: POTASSIUM ION, WA20
著者Arai, R, Kimura, A, Kobayashi, N, Matsuo, K, Sato, T, Wang, A.F, Platt, J.M, Bradley, L.H, Hecht, M.H.
登録日2011-10-18
公開日2012-03-28
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Domain-swapped dimeric structure of a stable and functional de novo four-helix bundle protein, WA20
J.Phys.Chem.B, 116, 2012
7PP2
DownloadVisualize
BU of 7pp2 by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-Pii with the host target Exo70F2 from Rice (Oryza sativa)
分子名称: AVR-Pii protein, Exocyst subunit Exo70 family protein, ZINC ION
著者De la Concepcion, J.C, Bentham, A.R, Lawson, D, Banfield, M.J.
登録日2021-09-13
公開日2022-06-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献A blast fungus zinc-finger fold effector binds to a hydrophobic pocket in host Exo70 proteins to modulate immune recognition in rice.
Proc.Natl.Acad.Sci.USA, 119, 2022
5C9M
DownloadVisualize
BU of 5c9m by Molmil
The structure of oxidized rat cytochrome c (T28A) at 1.362 angstroms resolution.
分子名称: Cytochrome c, somatic, HEME C, ...
著者Edwards, B.F.P, Mahapatra, G, Vaishnav, A.A, Brunzelle, J.S, Huttemann, M.
登録日2015-06-28
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.362 Å)
主引用文献The structure of oxidized rat cytochrome c (T28A) at 1.362 angstroms resolution.
To Be Published
3BZA
DownloadVisualize
BU of 3bza by Molmil
Structure of Mn-substituted Homoprotocatechuate 2,3-Dioxygenase from B.fuscum at 1.7 Ang resolution
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Kovaleva, E.G, Lipscomb, J.D.
登録日2008-01-17
公開日2008-05-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Swapping metals in Fe- and Mn-dependent dioxygenases: evidence for oxygen activation without a change in metal redox state.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2ZCG
DownloadVisualize
BU of 2zcg by Molmil
Structure and inhibition of orotidine 5'-phosphate decarboxylase from plasmodium falciparum
分子名称: Orotidine 5'-phosphate decarboxylase
著者Langley, D.B, Guss, J.M, Shojaei, M, Christopherson, R.I.
登録日2007-11-08
公開日2008-03-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.223 Å)
主引用文献Structure and Inhibition of Orotidine 5'-Monophosphate Decarboxylase from Plasmodium falciparum
Biochemistry, 47, 2008
4HE4
DownloadVisualize
BU of 4he4 by Molmil
Crystal structure of the yellow fluorescent protein phiYFP (Phialidium sp.)
分子名称: Yellow fluorescent protein
著者Pletneva, N, Pletnev, S, Pletnev, V.Z.
登録日2012-10-03
公開日2013-05-29
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Yellow fluorescent protein phiYFPv (Phialidium): structure and structure-based mutagenesis.
Acta Crystallogr.,Sect.D, 69, 2013
3ZSI
DownloadVisualize
BU of 3zsi by Molmil
X-ray structure of p38alpha bound to VX-745
分子名称: 5-(2,6-dichlorophenyl)-2-[(2,4-difluorophenyl)sulfanyl]-6H-pyrimido[1,6-b]pyridazin-6-one, MITOGEN-ACTIVATED PROTEIN KINASE 14, octyl beta-D-glucopyranoside
著者Azevedo, R, van Zeeland, M, Raaijmakers, H, Kazemier, B, Oubrie, A.
登録日2011-06-28
公開日2012-06-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献X-ray structure of p38 alpha bound to TAK-715: comparison with three classic inhibitors.
Acta Crystallogr. D Biol. Crystallogr., 68, 2012
6ZQS
DownloadVisualize
BU of 6zqs by Molmil
Crystal structure of double-phosphorylated p38alpha with ATF2(83-102)
分子名称: 2-[(2,4-difluorophenyl)amino]-7-{[(2R)-2,3-dihydroxypropyl]oxy}-10,11-dihydro-5H-dibenzo[a,d][7]annulen-5-one, Cyclic AMP-dependent transcription factor ATF-2, Mitogen-activated protein kinase 14
著者Kirsch, K, Sok, P, Poti, A.L, Remenyi, A.
登録日2020-07-10
公開日2020-11-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Co-regulation of the transcription controlling ATF2 phosphoswitch by JNK and p38.
Nat Commun, 11, 2020
3VOV
DownloadVisualize
BU of 3vov by Molmil
Crystal Structure of ROK Hexokinase from Thermus thermophilus
分子名称: GLYCEROL, Glucokinase, ZINC ION
著者Nakamura, T, Kashima, Y, Mine, S, Oku, T, Uegaki, K.
登録日2012-02-21
公開日2012-06-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Characterization and crystal structure of the thermophilic ROK hexokinase from Thermus thermophilus
J.Biosci.Bioeng., 2012
4AAL
DownloadVisualize
BU of 4aal by Molmil
MacA wild-type oxidized
分子名称: ACETATE ION, CALCIUM ION, CYTOCHROME C551 PEROXIDASE, ...
著者Seidel, J.
登録日2011-12-05
公開日2012-10-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Maca is a Second Cytochrome C Peroxidase of Geobacter Sulfurreducens.
Biochemistry, 51, 2012
4AAN
DownloadVisualize
BU of 4aan by Molmil
MacA wild-type fully reduced
分子名称: (R,R)-2,3-BUTANEDIOL, CALCIUM ION, CYTOCHROME C551 PEROXIDASE, ...
著者Seidel, J.
登録日2011-12-05
公開日2012-10-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Maca is a Second Cytochrome C Peroxidase of Geobacter Sulfurreducens.
Biochemistry, 51, 2012
4AAO
DownloadVisualize
BU of 4aao by Molmil
MacA-H93G
分子名称: CALCIUM ION, CYTOCHROME C551 PEROXIDASE, HEME C, ...
著者Seidel, J.
登録日2011-12-05
公開日2012-10-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Maca is a Second Cytochrome C Peroxidase of Geobacter Sulfurreducens.
Biochemistry, 51, 2012
4AAM
DownloadVisualize
BU of 4aam by Molmil
MacA wild-type mixed-valence
分子名称: CALCIUM ION, CYTOCHROME C551 PEROXIDASE, HEME C, ...
著者Seidel, J.
登録日2011-12-05
公開日2012-10-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Maca is a Second Cytochrome C Peroxidase of Geobacter Sulfurreducens.
Biochemistry, 51, 2012
3IAD
DownloadVisualize
BU of 3iad by Molmil
Crystal structure of human phosphodiesterase 4D with bound allosteric modulator
分子名称: 1-{4-[(2-fluoro-6-methoxy-3'-nitrobiphenyl-3-yl)methyl]phenyl}urea, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, ...
著者Staker, B.L, Burgin Jr, A.B.
登録日2009-07-13
公開日2010-01-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Design of phosphodiesterase 4D (PDE4D) allosteric modulators for enhancing cognition with improved safety.
Nat.Biotechnol., 28, 2010

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon