PDB: 245663 件ウェブページステータス検索Chemie searchBIRD

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3OPL	ESBL R164H mutant SHV-1 beta-lactamase 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-lactamase SHV-1, CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE 著者 Sampson, J.M, van den Akker, F. 登録日 2010-09-01 公開日 2011-07-13 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Ligand-dependent disorder of the Omega loop observed in extended-spectrum SHV-type beta-lactamase. Antimicrob.Agents Chemother., 55, 2011
2MP1	Solution structure of the human chemokine CCL19 分子名称: C-C motif chemokine 19 著者 Veldkamp, C.T, Peterson, F.C, Gabel-Eissens, S.J, Gillitzer, M.L. 登録日 2014-05-09 公開日 2015-06-10 最終更新日 2024-10-30 実験手法 SOLUTION NMR 主引用文献 Solution Structure of CCL19 and Identification of Overlapping CCR7 and PSGL-1 Binding Sites. Biochemistry, 54, 2015
3P79	P38 inhibitor-bound 分子名称: 1-{3-tert-butyl-1-[2-(1,1-dioxidothiomorpholin-4-yl)-2-oxoethyl]-1H-pyrazol-5-yl}-3-naphthalen-2-ylurea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside 著者 Moffett, K.K, Namboodiri, H. 登録日 2010-10-12 公開日 2011-10-12 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Discovery of a novel class of non-ATP site DFG-out state p38 inhibitors utilizing computationally assisted virtual fragment-based drug design (vFBDD). Bioorg.Med.Chem.Lett., 21, 2011
6JDZ	Ligand complex structure of GH10 family xylanase XynAF1, soaking for 20 minutes 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-xylanase, ... 著者 Li, G, Miao, Y, Zhang, R. 登録日 2019-02-02 公開日 2020-05-20 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.16 Å) 主引用文献 Crystal structure of GH10 family xylanase XynAF1 from Aspergillus fumigatus Z5 To Be Published
5Z7M	SmChiA sliding-intermediate with chitohexaose 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, Chitinase A, ... 著者 Nakamura, A, Iino, R. 登録日 2018-01-30 公開日 2018-09-26 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Processive chitinase is Brownian monorail operated by fast catalysis after peeling rail from crystalline chitin. Nat Commun, 9, 2018
4N7K	Zinc Substituted Reaction Center of the Rhodobacter sphaeroides 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CARDIOLIPIN, FE (III) ION, ... 著者 Hardjasa, A, Murphy, M.E.P. 登録日 2013-10-15 公開日 2014-02-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Structural and kinetic properties of Rhodobacter sphaeroides photosynthetic reaction centers containing exclusively Zn-coordinated bacteriochlorophyll as bacteriochlorin cofactors. Biochim.Biophys.Acta, 1837, 2013
4I7O	T4 Lysozyme L99A/M102H with 2-amino-5-chlorothiazole bound 分子名称: 2-HYDROXYETHYL DISULFIDE, 5-chloro-1,3-thiazol-2-amine, ACETATE ION, ... 著者 Merski, M, Shoichet, B.K. 登録日 2012-11-30 公開日 2013-03-27 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 The impact of introducing a histidine into an apolar cavity site on docking and ligand recognition. J.Med.Chem., 56, 2013
3A51	Structure of cytochrome P450 Vdh mutant (Vdh-K1) obtained by directed evolution with bound 25-hydroxyvitamin D3 分子名称: 3-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANOL, ACETATE ION, CALCIUM ION, ... 著者 Yasutake, Y, Fujii, Y, Cheon, W.K, Arisawa, A, Tamura, T. 登録日 2009-07-24 公開日 2010-07-28 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural evidence for enhancement of sequential vitamin D3 hydroxylation activities by directed evolution of cytochrome P450 vitamin D3 hydroxylase J.Biol.Chem., 285, 2010
3OKO	Crystal structure of S25-39 in complex with Kdo(2.8)Kdo(2.4)Kdo 分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-8)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, S25-39 Fab (IgG1k) heavy chain, S25-39 Fab (IgG1k) light chain, ... 著者 Blackler, R.J, Evans, S.V. 登録日 2010-08-25 公開日 2011-04-06 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 A Common NH53K Mutation in the Combining Site of Antibodies Raised against Chlamydial LPS Glycoconjugates Significantly Increases Avidity. Biochemistry, 50, 2011
1VG1	GDP-Bound Rab7 分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein Rab-7 著者 Rak, A, Pylypenko, O, Niculae, A, Pyatkov, K, Goody, R.S, Alexandrov, K. 登録日 2004-04-22 公開日 2004-07-20 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of the Rab7:REP-1 complex: insights into the mechanism of Rab prenylation and choroideremia disease Cell(Cambridge,Mass.), 117, 2004
2J8H	Structure of the immunoglobulin tandem repeat A168-A169 of titin 分子名称: GLYCEROL, TITIN 著者 Mueller, S, Lange, S, Kursula, I, Gautel, M, Wilmanns, M. 登録日 2006-10-25 公開日 2007-08-21 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Rigid Conformation of an Immunoglobulin Domain Tandem Repeat in the A-Band of the Elastic Muscle Protein Titin J.Mol.Biol., 371, 2007
6JE1	Ligand complex structure of GH10 family xylanase XynAF1, soaking for 40 minutes 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-xylanase, ... 著者 Li, G, Miao, Y, Zhang, R. 登録日 2019-02-02 公開日 2020-05-20 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.18 Å) 主引用文献 Crystal structure of GH10 family xylanase XynAF1 from Aspergillus fumigatus Z5 To Be Published
4QFR	Structure of AMPK in complex with Cl-A769662 activator and STAUROSPORINE inhibitor 分子名称: 2-chloro-4-hydroxy-3-(2'-hydroxybiphenyl-4-yl)-6-oxo-6,7-dihydrothieno[2,3-b]pyridine-5-carbonitrile, 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, ... 著者 Calabrese, M.F, Kurumbail, R.G. 登録日 2014-05-21 公開日 2014-08-06 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (3.34 Å) 主引用文献 Structural Basis for AMPK Activation: Natural and Synthetic Ligands Regulate Kinase Activity from Opposite Poles by Different Molecular Mechanisms. Structure, 22, 2014
3A0N	Crystal structure of D-glucuronic acid-bound alginate lyase vAL-1 from Chlorella virus 分子名称: VAL-1, beta-D-glucopyranuronic acid 著者 Ogura, K, Yamasaki, M, Hashidume, T, Yamada, T, Mikami, B, Hashimoto, W, Murata, K. 登録日 2009-03-23 公開日 2009-10-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Crystal structure of family 14 polysaccharide lyase with pH-dependent modes of action J.Biol.Chem., 284, 2009
4HXO	Brd4 Bromodomain 1 complex with 3-{[(3-METHYL-1,2-OXAZOL-5-YL)METHYL]SULFANYL}[1,2,4]TRIAZOLO[4,3-A]PYRIDINE inhibitor 分子名称: 3-{[(3-methyl-1,2-oxazol-5-yl)methyl]sulfanyl}[1,2,4]triazolo[4,3-a]pyridine, Bromodomain-containing protein 4 著者 Chen, T.T, Cao, D.Y, Chen, W.Y, Xiong, B, Shen, J.K, Xu, Y.C. 登録日 2012-11-12 公開日 2013-04-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Fragment-Based Drug Discovery of 2-Thiazolidinones as Inhibitors of the Histone Reader BRD4 Bromodomain. J.Med.Chem., 56, 2013
1QAE	THE ACTIVE SITE OF SERRATIA ENDONUCLEASE CONTAINS A CONSERVED MAGNESIUM-WATER CLUSTER 分子名称: MAGNESIUM ION, PROTEIN (EXTRACELLULAR ENDONUCLEASE) 著者 Miller, M.D, Krause, K.L. 登録日 1999-03-03 公開日 1999-05-18 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 The active site of Serratia endonuclease contains a conserved magnesium-water cluster. J.Mol.Biol., 288, 1999
2ZXZ	Crystal structure of the human RXR alpha ligand binding domain bound to a synthetic agonist compound and a coactivator peptide 分子名称: 4-[2-(1,1,3,3-tetramethyl-2,3-dihydro-1H-inden-5-yl)-1,3-dioxolan-2-yl]benzoic acid, GRIP1 from Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha 著者 Sato, Y, Antony, P, Rochel, N, Moras, D, Structural Genomics Consortium for Research on Gene Expression (SGCGES) 登録日 2009-01-09 公開日 2009-08-11 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Silicon analogues of the RXR-selective retinoid agonist SR11237 (BMS649): chemistry and biology Chemmedchem, 4, 2009
4I0T	Crystal structure of spleen tyrosine kinase complexed with 2-(5,6,7,8-Tetrahydro-imidazo[1,5-a]pyridin-1-yl)-5H-pyrrolo[2,3-b]pyrazine-7-carboxylic acid tert-butylamide 分子名称: N-tert-butyl-2-(5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-1-yl)-5H-pyrrolo[2,3-b]pyrazine-7-carboxamide, Tyrosine-protein kinase SYK 著者 Kuglstatter, A, Slade, M. 登録日 2012-11-19 公開日 2013-10-30 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Pyrrolopyrazines as selective spleen tyrosine kinase inhibitors. J.Med.Chem., 56, 2013
2ICJ	The crystal structure of human isopentenyl diphophate isomerase 分子名称: Isopentenyl-diphosphate delta isomerase, MAGNESIUM ION, SULFATE ION 著者 Zheng, W, Bartlam, M, Rao, Z. 登録日 2006-09-12 公開日 2007-03-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The crystal structure of human isopentenyl diphosphate isomerase at 1.7 A resolution reveals its catalytic mechanism in isoprenoid biosynthesis J.Mol.Biol., 366, 2007
2A3W	Decameric structure of human serum amyloid P-component bound to Bis-1,2-{[(Z)-2-carboxy-2-methyl-1,3-dioxane]-5-yloxycarbamoyl}-ethane 分子名称: BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1,3-DIOXANE]-5-YLOXYCARBAMOYL}-ETHANE, CALCIUM ION, Serum amyloid P-component 著者 Ho, J.G, Kitov, P.I, Paszkiewicz, E, Sadowska, J, Bundle, D.R, Ng, K.K. 登録日 2005-06-27 公開日 2005-07-26 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Ligand-assisted Aggregation of Proteins: DIMERIZATION OF SERUM AMYLOID P COMPONENT BY BIVALENT LIGANDS. J.Biol.Chem., 280, 2005
2DOH	The X-ray crystallographic structure of the angiogenesis inhibitor, angiostatin, bound a to a peptide from the group A streptococcal surface protein PAM 分子名称: 1,4-DIETHYLENE DIOXIDE, Angiostatin, Plasminogen-binding group A streptococcal M-like protein PAM 著者 Cnudde, S.E, Prorok, M, Castellino, F.J, Geiger, J.H. 登録日 2006-04-29 公開日 2006-12-05 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 X-ray crystallographic structure of the angiogenesis inhibitor, angiostatin, bound to a peptide from the group A streptococcal surface protein PAM Biochemistry, 45, 2006
3P37	Polo-like kinase I Polo-box domain in complex with FDPPLHSpTA phosphopeptide from PBIP1 分子名称: GLYCEROL, Serine/threonine-protein kinase PLK1, phosphopeptide 著者 Sledz, P, Hyvonen, M, Abell, C. 登録日 2010-10-04 公開日 2011-04-27 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 From crystal packing to molecular recognition: prediction and discovery of a binding site on the surface of polo-like kinase 1 Angew.Chem.Int.Ed.Engl., 50, 2011
3A0I	Human glucokinase in complex with a synthetic activator 分子名称: 3-[(4-fluorophenyl)sulfanyl]-N-(4-methyl-1,3-thiazol-2-yl)-6-[(4-methyl-4H-1,2,4-triazol-3-yl)sulfanyl]pyridine-2-carboxamide, Glucokinase, SODIUM ION, ... 著者 Kamata, K, Mitsuya, M. 登録日 2009-03-19 公開日 2009-04-28 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Discovery of novel 3,6-disubstituted 2-pyridinecarboxamide derivatives as GK activators Bioorg.Med.Chem.Lett., 19, 2009
1VL5	CRYSTAL STRUCTURE OF A PUTATIVE METHYLTRANSFERASE (BH2331) FROM BACILLUS HALODURANS C-125 AT 1.95 A RESOLUTION 分子名称: unknown conserved protein BH2331 著者 Joint Center for Structural Genomics (JCSG) 登録日 2004-07-09 公開日 2004-08-17 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structure of hypothetical protein (BH2331) from Bacillus halodurans at 1.95 A resolution To be published
1VRM	Crystal structure of the apbe protein (tm1553) from thermotoga maritima msb8 at 1.58 A resolution 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, UNKNOWN LIGAND, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2005-03-10 公開日 2005-03-22 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Crystal structure of the ApbE protein (TM1553) from Thermotoga maritima at 1.58 A resolution. Proteins, 64, 2006

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