PDB: 45118 件ウェブページステータス検索Chemie searchBIRD

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2BEM	Crystal structure of the Serratia marcescens chitin-binding protein CBP21 分子名称: 1,2-ETHANEDIOL, CBP21, SODIUM ION, ... 著者 Vaaje-Kolstad, G, Houston, D.R, Eijsink, V.G.H, van Aalten, D.M.F. 登録日 2004-11-26 公開日 2004-12-08 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal Structure and Binding Properties of the Serratia Marcescens Chitin-Binding Protein Cbp21 J.Biol.Chem., 280, 2005
6SYD	Crystal structure of the lysozyme in presence of bromophenol blue at pH 5.5 分子名称: Lysozyme, SODIUM ION, bromophenol blue 著者 Camara-Artigas, A, Plaza-Garrido, M, Salinas-Garcia, M.C. 登録日 2019-09-27 公開日 2020-09-09 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Lysozyme crystals dyed with bromophenol blue: where has the dye gone? Acta Crystallogr D Struct Biol, 76, 2020
5EGM	Development of a novel tricyclic class of potent and selective FIXa inhibitors 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 2-chloranyl-~{N}-[(7~{S})-2-methyl-7-phenyl-10-(1~{H}-1,2,3,4-tetrazol-5-yl)-8,9-dihydro-6~{H}-pyrido[1,2-a]indol-7-yl]-4-(1,2,4-triazol-4-yl)benzamide, Coagulation factor IX, ... 著者 Meng, D, Andre, P, Bateman, T.J, Berger, R, Chen, Y, Desai, K, Dewnani, S, Ellsworth, K, Feng, D, Geissler, W.M, Guo, L, Hruza, A, Jian, T, Li, H, Parker, D.L, Reichert, P, Sherer, E.C, Smith, C.J, Sonatore, L.M, Tschirret-Guth, R, Wu, J, Xu, J, Zhang, T, Campeau, L, Orr, R, Poirier, M, McCabe-Dunn, j, Araki, K, Nishimura, T, Sakurada, I, Hirabayashi, T, Wood, H.B. 登録日 2015-10-27 公開日 2015-11-18 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.841 Å) 主引用文献 Development of a novel tricyclic class of potent and selective FIXa inhibitors. Bioorg.Med.Chem.Lett., 25, 2015
5EH7	human carbonic anhydrase II in complex with ligand 分子名称: 5-[[3,4-bis(chloranyl)phenoxy]methyl]-1~{H}-1,2,3,4-tetrazole, Carbonic anhydrase 2, FORMIC ACID, ... 著者 Ren, B. 登録日 2015-10-28 公開日 2016-03-09 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.425 Å) 主引用文献 Native State Mass Spectrometry, Surface Plasmon Resonance, and X-ray Crystallography Correlate Strongly as a Fragment Screening Combination. J.Med.Chem., 59, 2016
5EHV	human carbonic anhydrase II in complex with ligand 分子名称: (~{E})-3-[3-[[3-(2-hydroxy-2-oxoethyl)phenyl]methoxy]phenyl]prop-2-enoic acid, Carbonic anhydrase 2, FORMIC ACID, ... 著者 Ren, B. 登録日 2015-10-29 公開日 2016-03-09 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.208 Å) 主引用文献 Native State Mass Spectrometry, Surface Plasmon Resonance, and X-ray Crystallography Correlate Strongly as a Fragment Screening Combination. J.Med.Chem., 59, 2016
6BG1	Caspase-3 Mutant - D9A,D28A,S150E 分子名称: AC-ASP-GLU-VAL-ASP-CMK, Caspase-3, SODIUM ION 著者 Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C. 登録日 2017-10-27 公開日 2018-02-21 最終更新日 2018-04-25 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Modifications to a common phosphorylation network provide individualized control in caspases. J. Biol. Chem., 293, 2018
6B24	Crystal structure of fluoride channel Fluc Ec2 F80Y Mutant 分子名称: DECYL-BETA-D-MALTOPYRANOSIDE, FLUORIDE ION, Fluoride ion transporter CrcB, ... 著者 Last, N.B, Sun, S, Pham, M.C, Miller, C. 登録日 2017-09-19 公開日 2017-10-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Molecular determinants of permeation in a fluoride-specific ion channel. Elife, 6, 2017
6B7V	Structure of hen egg-white lysozyme pre-treated with high-pressure homogenization at 120 MPa 分子名称: ACETATE ION, CHLORIDE ION, GLYCEROL, ... 著者 Morais, M.A.B, Nascimento, A.F.Z, Tominaga, C.Y, Cristianini, M, Tribst, A.A.L, Murakami, M.T. 登録日 2017-10-05 公開日 2018-07-25 実験手法 X-RAY DIFFRACTION (1.482 Å) 主引用文献 How high pressure pre-treatments affect the function and structure of hen egg-white lysozyme Innov Food Sci Emerg Technol, 47, 2018
5G27	Structure of Spin-labelled T4 lysozyme mutant L118C-R1 at Room Temperature 分子名称: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, ENDOLYSIN, ... 著者 Gohlke, U, Consentius, P, Loll, B, Mueller, R, Kaupp, M, Heinemann, U, Risse, T. 登録日 2016-04-07 公開日 2016-11-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Tracking Transient Conformational States of T4 Lysozyme at Room Temperature Combining X-Ray Crystallography and Site-Directed Spin Labeling. J.Am.Chem.Soc., 138, 2016
6BCM	Structure of a Self-inhibited N475A variant of the Venezuelan Equine Encephalitis Virus (VEEV) nsP2 cysteine protease 分子名称: GLYCEROL, Protease nsP2, SODIUM ION 著者 Compton, J.R, Legler, P.M. 登録日 2017-10-20 公開日 2017-11-08 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mutation of Asn-475 in the Venezuelan Equine Encephalitis Virus nsP2 Cysteine Protease Leads to a Self-Inhibited State. Biochemistry, 56, 2017
5G3B	Preserving metallic sites affected by radiation damage: the CuT2 case in Thermus thermophilus multicopper oxidase 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, ... 著者 Ruiz-Arellano, R.R, Diaz, A, Rosas, E, Rudino, E. 登録日 2016-04-25 公開日 2017-05-24 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Preserving Metallic Sites Affected by Radiation Damage the Cut2 Case in Thermus Thermophilus Multicopper Oxidase To be Published
7ZTW	Crystal Structure of Human Parechovirus 1 2A protein 分子名称: ACETATE ION, Protein 2A, SODIUM ION 著者 von Castelmur, E, Perrakis, A. 登録日 2022-05-11 公開日 2023-05-24 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Human Parechovirus 1 2A protein To Be Published
5G3G	Preserving MEtallic Sites Affected by Radiation Damage the CuT2 case in Thermus Thermophilus multicopper Oxidase 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, ... 著者 Ruiz-Arellano, R, Diaz, A, Rosas, E, Rudino, E. 登録日 2016-04-26 公開日 2017-06-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Preserving Metallic Sites Affected by Radiation Damage the Cut2 Case in Thermus Thermophilus Multicopper Oxidase To be Published
6B2B	Crystal structure of fluoride channel Fluc Ec2 F83M Mutant 分子名称: DECYL-BETA-D-MALTOPYRANOSIDE, FLUORIDE ION, Fluoride ion transporter CrcB, ... 著者 Last, N.B, Sun, S, Pham, M.C, Miller, C. 登録日 2017-09-19 公開日 2017-10-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Molecular determinants of permeation in a fluoride-specific ion channel. Elife, 6, 2017
5GND	Structure of Deg protease HhoA from Synechocystis sp. PCC 6803 分子名称: Putative serine protease HhoA, SODIUM ION, UNK-UNK-UNK-UNK-TRP, ... 著者 Dong, W, Wang, J, Liu, L. 登録日 2016-07-20 公開日 2016-09-21 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of the zinc-bound HhoA protease from Synechocystis sp. PCC 6803 Febs Lett., 590, 2016
6SR5	X-ray pump X-ray probe on lysozyme.Gd nanocrystals: 102 fs time delay 分子名称: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ... 著者 Kloos, M, Gorel, A, Nass, K. 登録日 2019-09-04 公開日 2020-04-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural dynamics in proteins induced by and probed with X-ray free-electron laser pulses. Nat Commun, 11, 2020
5G3F	Preserving Metallic Sites Affected by Radiation Damage the CuT2 CAse in Thermus Thermophilus Multicopper Oxidase 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, ... 著者 Ruiz-Arellano, R, Diaz, A, Rosas, E, Rudino, E. 登録日 2016-04-25 公開日 2017-05-24 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Preserving Metallic Sites Affected by Radiation Damage the Cut2 Case in Thermus Thermophilus Multicopper Oxidase To be Published
6BKG	Human LigIV catalytic domain with bound DNA-adenylate intermediate in closed conformation 分子名称: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ... 著者 Moon, A.F, Tumbale, P.P, Schellenberg, M.J, Williams, R.S, Williams, J.G, Kunkel, T.A, Pedersen, L.C, Bebenek, B. 登録日 2017-11-08 公開日 2018-07-18 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.402 Å) 主引用文献 Structures of DNA-bound human ligase IV catalytic core reveal insights into substrate binding and catalysis. Nat Commun, 9, 2018
5FU2	The complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition 分子名称: CALCIUM ION, CBM74-RFGH5, SODIUM ION, ... 著者 Basle, A, Luis, A.S, Venditto, I, Gilbert, H.J. 登録日 2016-01-20 公開日 2016-06-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Complexity of the Ruminococcus Flavefaciens Cellulosome Reflects an Expansion in Glycan Recognition. Proc.Natl.Acad.Sci.USA, 113, 2016
5FA4	Structure of HLA-A2:01 with peptide Y16R 分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ... 著者 Remesh, S.G, Zajonc, D.M. 登録日 2015-12-10 公開日 2016-12-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT. J. Biol. Chem., 292, 2017
6C7W	Carbonic anhydrase 2 in complex with [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDRO-2-FURANYL]METHYL SULFAMATE inhibitor 分子名称: Carbonic anhydrase 2, SODIUM ION, ZINC ION, ... 著者 Peat, T.S, Mujumdar, P, Poulsen, S.A. 登録日 2018-01-23 公開日 2018-05-23 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.28 Å) 主引用文献 Synthesis, structure and bioactivity of primary sulfamate-containing natural products. Bioorg. Med. Chem. Lett., 28, 2018
5FYZ	Crystal structure of the catalytic domain of human JARID1B in complex with 3D fragment 2-(2-oxo-2,3-dihydro-1H-indol-3-yl)acetonitrile (N10063a) 分子名称: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, LYSINE-SPECIFIC DEMETHYLASE 5B, ... 著者 Nowak, R, Krojer, T, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, von Delft, F, Brennan, P.E, Oppermann, U. 登録日 2016-03-10 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with N10063A To be Published
5FFN	Complex of subtilase SubTY from Bacillus sp. TY145 with chymotrypsin inhibitor CI2A 分子名称: CALCIUM ION, Enzyme subtilase SubTY from Bacillus sp. TY145, SODIUM ION, ... 著者 McAuley, K.E, Svendsen, A, Oestergaard, P.R, Dohnalek, J, Wilson, K.S. 登録日 2015-12-18 公開日 2016-05-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Stabilization of Enzymes by Metal Binding: Structures of Two Alkalophilic Bacillus Subtilases and Analysis of the Second Metal-Binding Site of the Subtilase Family Book, 2016
5FH5	The structure of rat cytosolic PEPCK variant E89Q in complex with phosphoglycolate and GDP 分子名称: 2-PHOSPHOGLYCOLIC ACID, GUANOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, ... 著者 Johnson, T.A, Holyoak, T. 登録日 2015-12-21 公開日 2016-11-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Utilization of Substrate Intrinsic Binding Energy for Conformational Change and Catalytic Function in Phosphoenolpyruvate Carboxykinase. Biochemistry, 55, 2016
6R7J	Ligand complex of RORg LBD 分子名称: (2~{R})-2-acetamido-2-(4-ethylsulfonylphenyl)-~{N}-[4-[1,1,1,3,3,3-hexakis(fluoranyl)-2-oxidanyl-propan-2-yl]phenyl]ethanamide, DIMETHYL SULFOXIDE, Nuclear receptor ROR-gamma, ... 著者 Xue, Y, Aagaard, A, Narjes, F. 登録日 2019-03-29 公開日 2019-07-03 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Discovery of Potent and Orally Bioavailable Inverse Agonists of the Retinoic Acid Receptor-Related Orphan Receptor C2. Acs Med.Chem.Lett., 10, 2019

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