PDB: 45118 件ウェブページステータス検索Chemie searchBIRD

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5DTB	Crystal structure of the Drosophila CG3822 KaiR1D ligand binding domain complex with glutamate 分子名称: CG3822, GLUTAMIC ACID, GLYCEROL, ... 著者 Dharkar, P, Mayer, M.L. 登録日 2015-09-17 公開日 2016-09-28 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.843 Å) 主引用文献 Novel Functional Properties of Drosophila CNS Glutamate Receptors. Neuron, 92, 2016
5E9R	X-ray structure of the complex between lysozyme and the compound fac, cis-[RuII(CO)3Cl2(N3-MBI), MBI=N-methyl-benzimidazole 分子名称: CARBON MONOXIDE, CHLORIDE ION, Lysozyme C, ... 著者 Merlino, A. 登録日 2015-10-15 公開日 2016-10-26 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 {Ru(CO)x}-core Complexes with N-Methylbenzimidazole (MBI) and 5,6-Dimethylbenzimidazole (DMBI) as Possible Metal Based Drugs and CO Release Materials. Synthesis, X-ray Structure and Evaluation of Cytotoxic Activity against Human Cancer Cells To Be Published
2BQJ	CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME 分子名称: LYSOZYME, SODIUM ION 著者 Takano, K, Yamagata, Y, Yutani, K. 登録日 1998-05-21 公開日 1998-08-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme. J.Mol.Biol., 280, 1998
2BQA	CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME 分子名称: LYSOZYME, SODIUM ION 著者 Takano, K, Yamagata, Y, Yutani, K. 登録日 1998-05-21 公開日 1998-08-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme. J.Mol.Biol., 280, 1998
2BQC	CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME 分子名称: LYSOZYME, SODIUM ION 著者 Takano, K, Yamagata, Y, Yutani, K. 登録日 1998-05-21 公開日 1998-08-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme. J.Mol.Biol., 280, 1998
2BQB	CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME 分子名称: LYSOZYME, SODIUM ION 著者 Takano, K, Yamagata, Y, Yutani, K. 登録日 1998-05-21 公開日 1998-08-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme. J.Mol.Biol., 280, 1998
2BQE	CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME 分子名称: LYSOZYME, SODIUM ION 著者 Takano, K, Yamagata, Y, Yutani, K. 登録日 1998-05-21 公開日 1998-08-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme. J.Mol.Biol., 280, 1998
4UD9	Thrombin in complex with 5-chlorothiophene-2-carboxamide 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-CHLORO-2-THIOPHENECARBOXAMIDE, ... 著者 Ruehmann, E, Heine, A, Klebe, G. 登録日 2014-12-09 公開日 2015-08-26 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.124 Å) 主引用文献 Fragments Can Bind Either More Enthalpy or Entropy-Driven: Crystal Structures and Residual Hydration Pattern Suggest Why. J.Med.Chem., 58, 2015
2BQO	CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME 分子名称: LYSOZYME, SODIUM ION 著者 Takano, K, Yamagata, Y, Yutani, K. 登録日 1998-05-21 公開日 1998-08-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme. J.Mol.Biol., 280, 1998
2BQF	CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME 分子名称: LYSOZYME, SODIUM ION 著者 Takano, K, Yamagata, Y, Yutani, K. 登録日 1998-05-21 公開日 1998-08-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme. J.Mol.Biol., 280, 1998
2BQN	CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME 分子名称: LYSOZYME, SODIUM ION 著者 Takano, K, Yamagata, Y, Yutani, K. 登録日 1998-05-21 公開日 1998-08-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme. J.Mol.Biol., 280, 1998
5EBA	Crystal structure of aromatic mutant (Y343A) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27 分子名称: Beta-xylanase, MAGNESIUM ION, SODIUM ION 著者 Mahanta, P, Bhardwaj, A, Reddy, V.S, Ramakumar, S. 登録日 2015-10-18 公開日 2016-10-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of aromatic mutant (Y343A) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27 To Be Published
6S09	C-terminally extended and N-terminally truncated variant of FimA E. coli at 1.5 Angstrom resolution 分子名称: ACETIC ACID, FimA, SODIUM ION, ... 著者 Zyla, D, Echeverria, B, Glockshuber, R. 登録日 2019-06-14 公開日 2020-07-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.502 Å) 主引用文献 Donor strand sequence, rather than donor strand orientation, determines the stability and non-equilibrium folding of the type 1 pilus subunit FimA. J.Biol.Chem., 295, 2020
6A38	MVM NS2 NES in complex with CRM1-Ran-RanBP1 分子名称: 1,2-ETHANEDIOL, Exportin-1, GLYCEROL, ... 著者 Sun, Q, Li, Y. 登録日 2018-06-15 公開日 2019-06-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Cancer Therapy with Nanoparticle-Medicated Intracellular Expression of Peptide CRM1-Inhibitor. Int J Nanomedicine, 16, 2021
6A47	Structure of TREX2 in complex with a Y structured dsDNA 分子名称: DNA (5'-D(P*CP*CP*AP*GP*GP*CP*CP*CP*TP*CP*TP*AP*GP*GP*GP*CP*CP*TP*T)-3'), MAGNESIUM ION, SODIUM ION, ... 著者 Hsiao, Y.Y. 登録日 2018-06-19 公開日 2018-11-07 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural insights into the duplex DNA processing of TREX2 Nucleic Acids Res., 46, 2018
7Z50	Structure of the highly diabetogenic 4.1-T cell receptor targeting a hybrid insulin peptide bound to I-Ag7. 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4.1 TCR alpha chain, ... 著者 Lopez-Sagaseta, J, Erausquin, E. 登録日 2022-03-06 公開日 2022-07-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structural plasticity in I-A g7 links autoreactivity to hybrid insulin peptides in type I diabetes. Front Immunol, 13, 2022
6A4N	HEWL crystals soaked in 2.5M GuHCl for 8 minutes 分子名称: CHLORIDE ION, GLYCEROL, GUANIDINE, ... 著者 Tushar, R, Kini, R.M, Koh, C.Y, Hosur, M.V. 登録日 2018-06-20 公開日 2019-03-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 X-ray crystallographic analysis of time-dependent binding of guanidine hydrochloride to HEWL: First steps during protein unfolding. Int. J. Biol. Macromol., 122, 2019
6RNL	L-[Ru(TAP)2(dppz)]2+ bound to the G-quadruplex forming sequence d(TAGGGTT) 分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*TP*T)-3'), POTASSIUM ION, Ru(tap)2(dppz) complex, ... 著者 McQuaid, K.T, Hall, J.P, Cardin, C.J. 登録日 2019-05-09 公開日 2019-08-28 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Three thymine/adenine binding modes of the ruthenium complex Lambda-[Ru(TAP)2(dppz)]2+to the G-quadruplex forming sequence d(TAGGGTT) shown by X-ray crystallography. Chem.Commun.(Camb.), 55, 2019
6A83	Crystal structure of the C-terminal periplasmic domain of EcEptC from Escherichia coli complex with Zn 分子名称: Phosphoethanolamine transferase EptC, SODIUM ION, ZINC ION 著者 Zhao, Y.Q, Gu, Y.J, Cheng, W. 登録日 2018-07-06 公開日 2018-12-26 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.602 Å) 主引用文献 Structural and mechanistic insights into polymyxin resistance mediated by EptC originating from Escherichia coli. FEBS J., 286, 2019
4UEH	Thrombin in complex with benzamidine 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BENZAMIDINE, GLYCEROL, ... 著者 Ruehmann, E, Heine, A, Klebe, G. 登録日 2014-12-17 公開日 2015-08-26 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.16 Å) 主引用文献 Fragments Can Bind Either More Enthalpy or Entropy-Driven: Crystal Structures and Residual Hydration Pattern Suggest Why. J.Med.Chem., 58, 2015
4UE7	Thrombin in complex with 1-amidinopiperidine 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ... 著者 Ruehmann, E, Heine, A, Klebe, G. 登録日 2014-12-16 公開日 2015-08-26 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.129 Å) 主引用文献 Fragments Can Bind Either More Enthalpy or Entropy-Driven: Crystal Structures and Residual Hydration Pattern Suggest Why. J.Med.Chem., 58, 2015
4UFF	Thrombin in complex with (2R)-2-(benzylsulfonylamino)-N-(2-((4- carbamimidoylphenyl)methylamino)-2-oxo-ethyl)-N-methyl-3-phenyl- propanamide 分子名称: (2R)-2-(benzylsulfonylamino)-N-(2-((4-carbamimidoylphenyl)methylamino)-2-oxo-ethyl)-N-methyl-3-phenyl-propanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, HIRUDIN VARIANT-2, ... 著者 Ruehmann, E, Heine, A, Klebe, G. 登録日 2015-03-16 公開日 2016-01-27 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Boosting Affinity by Correct Ligand Preorganization for the S2 Pocket of Thrombin: A Study by Isothermal Titration Calorimetry, Molecular Dynamics, and High-Resolution Crystal Structures. Chemmedchem, 11, 2016
6RU6	Crystal structure of Casein Kinase I delta (CK1d) in complex with monophosphorylated p63 PAD1P peptide 分子名称: 1,2-ETHANEDIOL, Casein kinase I isoform delta, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ... 著者 Chaikuad, A, Tuppi, M, Gebel, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Dotsch, V, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2019-05-27 公開日 2020-05-13 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 p63 uses a switch-like mechanism to set the threshold for induction of apoptosis. Nat.Chem.Biol., 16, 2020
6S16	T. thermophilus RuvC in complex with Holliday junction substrate 分子名称: CHLORIDE ION, Crossover junction endodeoxyribonuclease RuvC, DNA (33-MER), ... 著者 Gorecka, K.M, Krepl, M, Szlachcic, A, Poznanski, J, Sponer, J, Nowotny, M. 登録日 2019-06-18 公開日 2019-09-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.409 Å) 主引用文献 RuvC uses dynamic probing of the Holliday junction to achieve sequence specificity and efficient resolution. Nat Commun, 10, 2019
4UFD	Thrombin in complex with 4-(((1-((2S)-1-((2R)-2-(benzylsulfonylamino)- 3-phenyl-propanoyl)pyrrolidin-2-yl)-1-oxo-ethyl)amino)methyl) benzamidine 分子名称: (2S)-N-[(4-carbamimidoylphenyl)methyl]-1-[(2R)-3-phenyl-2-[(phenylmethyl)sulfonylamino]propanoyl]pyrrolidine-2-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ... 著者 Ruehmann, E, Heine, A, Klebe, G. 登録日 2015-03-16 公開日 2016-01-27 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.429 Å) 主引用文献 Boosting Affinity by Correct Ligand Preorganization for the S2 Pocket of Thrombin: A Study by Isothermal Titration Calorimetry, Molecular Dynamics, and High-Resolution Crystal Structures. Chemmedchem, 11, 2016

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