PDB: 245663 件ウェブページステータス検索Chemie searchBIRD

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4R36	Crystal structure analysis of LpxA, a UDP-N-acetylglucosamine acyltransferase from Bacteroides fragilis 9343 分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ACETATE ION, ... 著者 Ngo, A, Fong, K, Cox, D, Fisher, A, Chen, X. 登録日 2014-08-14 公開日 2015-05-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structures of Bacteroides fragilis uridine 5'-diphosphate-N-acetylglucosamine (UDP-GlcNAc) acyltransferase (BfLpxA). Acta Crystallogr.,Sect.D, 71, 2015
5RY1	INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z2940170964 分子名称: (3R)-1-methylpiperidin-3-yl furan-2-carboxylate, DIMETHYL SULFOXIDE, Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 著者 Bradshaw, W.J, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O. 登録日 2020-10-30 公開日 2020-11-11 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Regulation of inositol 5-phosphatase activity by the C2 domain of SHIP1 and SHIP2. Structure, 2024
3W53	Crystal structure of psychrophilic beta-glucosidase BglU from Micrococcus antarcticus 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucosidase 著者 Hou, Y.J, Miao, L.L, Li, D.F, Liu, Z.P. 登録日 2013-01-18 公開日 2014-01-22 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural and biochemical identification of key factors responsible for cold adaptation of Micrococcus antarcticus beta-glucosidase BglU To be Published
1OS6	Cytochrome c7 (PpcA) from Geobacter sulfurreducens 分子名称: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, HEME C, PpcA, ... 著者 Pokkuluri, P.R, Londer, Y.Y, Duke, N.E.C, Long, W.C, Schiffer, M. 登録日 2003-03-18 公開日 2004-02-03 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Family of cytochrome c7-type proteins from Geobacter sulfurreducens: structure of one cytochrome c7 at 1.45 A resolution. Biochemistry, 43, 2004
5RYO	EPB41L3 PanDDA analysis group deposition -- Crystal Structure of the FERM domain of human EPB41L3 in complex with Z136583524 分子名称: 1,2-ETHANEDIOL, 2-methyl-N-(pyridin-4-yl)furan-3-carboxamide, DIMETHYL SULFOXIDE, ... 著者 Bradshaw, W.J, Katis, V.L, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O. 登録日 2020-10-30 公開日 2020-11-11 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 EPB41L3 PanDDA analysis group deposition To Be Published
5HMJ	Re-refinement of 4xan: hen lysozyme with carboplatin in sodium bromide solution 分子名称: ACETATE ION, BROMIDE ION, DIMETHYL SULFOXIDE, ... 著者 Helliwell, J.R. 登録日 2016-01-16 公開日 2016-03-02 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.299901 Å) 主引用文献 Re-refinement of 4xan: hen egg-white lysozyme with carboplatin in sodium bromide solution. Acta Crystallogr F Struct Biol Commun, 72, 2016
3PJX	Structure of Pseudomonas fluorescence LapD GGDEF-EAL dual domain, P32 分子名称: 1,2-ETHANEDIOL, Cyclic dimeric GMP binding protein 著者 Sondermann, H, Navarro, M.V.A.S. 登録日 2010-11-10 公開日 2011-02-09 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.0002 Å) 主引用文献 Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis. Plos Biol., 9, 2011
5RY6	INPP5D PanDDA analysis group deposition -- Crystal Structure of the phosphatase and C2 domains of SHIP1 in complex with Z198194394 分子名称: 4-(4-fluorophenyl)piperazine-1-carboxamide, DIMETHYL SULFOXIDE, Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 著者 Bradshaw, W.J, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O. 登録日 2020-10-30 公開日 2020-11-11 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Regulation of inositol 5-phosphatase activity by the C2 domain of SHIP1 and SHIP2. Structure, 2024
4R5E	Crystal Structure of Family GH18 Chitinase from Cycas revoluta a Complex with Allosamidin 分子名称: 2-acetamido-2-deoxy-beta-D-allopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-allopyranose, ACETATE ION, ALLOSAMIZOLINE, ... 著者 Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T. 登録日 2014-08-21 公開日 2015-07-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structures and inhibitor binding properties of plant class V chitinases: the cycad enzyme exhibits unique structural and functional features. Plant J., 82, 2015
5RYR	EPB41L3 PanDDA analysis group deposition -- Crystal Structure of the FERM domain of human EPB41L3 in complex with Z104584152 分子名称: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, Isoform 2 of Band 4.1-like protein 3, ... 著者 Bradshaw, W.J, Katis, V.L, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O. 登録日 2020-10-30 公開日 2020-11-11 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 EPB41L3 PanDDA analysis group deposition To Be Published
5RZX	EPB41L3 PanDDA analysis group deposition -- Crystal Structure of the FERM domain of human EPB41L3 in complex with Z2856434814 分子名称: 1,2-ETHANEDIOL, 3-(diethylamino)phenol, DIMETHYL SULFOXIDE, ... 著者 Bradshaw, W.J, Katis, V.L, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O. 登録日 2020-10-30 公開日 2020-11-11 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 EPB41L3 PanDDA analysis group deposition To Be Published
5RZV	EPB41L3 PanDDA analysis group deposition -- Crystal Structure of the FERM domain of human EPB41L3 in complex with Z31504642 分子名称: 1,2-ETHANEDIOL, 2-methoxy-N-phenylacetamide, DIMETHYL SULFOXIDE, ... 著者 Bradshaw, W.J, Katis, V.L, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O. 登録日 2020-10-30 公開日 2020-11-11 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 EPB41L3 PanDDA analysis group deposition To Be Published
2LK9	Structure of BST-2/Tetherin Transmembrane Domain 分子名称: Bone marrow stromal antigen 2 著者 Skasko, M, Wang, Y, Tian, Y, Tokarev, A, Munguia, J, Ruiz, A, Stephens, E, Opella, S, Guatelli, J. 登録日 2011-10-07 公開日 2011-11-09 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 HIV-1 Vpu Protein Antagonizes Innate Restriction Factor BST-2 via Lipid-embedded Helix-Helix Interactions. J.Biol.Chem., 287, 2012
4IWQ	Crystal structure and mechanism of activation of TBK1 分子名称: N-{3-[(5-cyclopropyl-2-{[3-(morpholin-4-ylmethyl)phenyl]amino}pyrimidin-4-yl)amino]propyl}cyclobutanecarboxamide, Serine/threonine-protein kinase TBK1 著者 Panne, D, Larabi, A. 登録日 2013-01-24 公開日 2013-03-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure and mechanism of activation of TANK-binding kinase 1. Cell Rep, 3, 2013
4IXC	Crystal structure of Human Glucokinase in complex with a small molecule activator. 分子名称: (2S)-2-{[1-(3-chloropyridin-2-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-yl]oxy}-N-(5-methylpyridin-2-yl)-3-(propan-2-yloxy)propanamide, Glucokinase isoform 3, SODIUM ION, ... 著者 Ogg, D.J, Hargreaves, D, Gerhardt, S. 登録日 2013-01-25 公開日 2013-04-24 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Matched triplicate design sets in the optimisation of glucokinase activators maximising medicinal chemistry information content To be Published
5T9W	Discovery of a Potent Cyclophilin Inhibitor (Compound 5) based on Structural Simplification of Sanglifehrin A 分子名称: 3-[(3-hydroxyphenyl)methyl]-6-(propan-2-yl)-19-oxa-1,4,7,25-tetraazabicyclo[19.3.1]pentacosa-13,15-diene-2,5,8,20-tetrone, Peptidyl-prolyl cis-trans isomerase A 著者 Appleby, T.C, Steadman, V, Pettit, P, Schmitz, U, Mackman, R.L, Schultz, B. 登録日 2016-09-09 公開日 2017-01-25 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Discovery of Potent Cyclophilin Inhibitors Based on the Structural Simplification of Sanglifehrin A. J. Med. Chem., 60, 2017
4OAV	Complete human RNase L in complex with 2-5A (5'-ppp heptamer), AMPPCP and RNA substrate. 分子名称: (2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-4-hydroxy-2-({[(S)-hydroxy{[(2R,3S,4S)-4-hydroxy-2-(hydroxymethyl)tetrahydrofuran-3-yl]oxy}phosphoryl]oxy}methyl)tetrahydrofuran-3-yl dihydrogen phosphate, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ... 著者 Han, Y, Donovan, J, Rath, S, Whitney, G, Chitrakar, A, Korennykh, A. 登録日 2014-01-06 公開日 2014-03-12 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of human RNase L reveals the basis for regulated RNA decay in the IFN response. Science, 343, 2014
6B31	Structure of RORgt in complex with a novel inverse agonist 2 分子名称: (3S)-N~1~-(3-chloro-4-cyanophenyl)-N~5~-(1,3-diethyl-2,4-dioxo-1,2,3,4-tetrahydroquinazolin-6-yl)-3-methylpentanediamide, Nuclear receptor ROR-gamma 著者 Skene, R.J, Hoffman, I. 登録日 2017-09-20 公開日 2018-08-01 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.18 Å) 主引用文献 Identification of novel quinazolinedione derivatives as ROR gamma t inverse agonist. Bioorg. Med. Chem., 26, 2018
4GCY	Structure of Mycobacterium tuberculosis dUTPase H21W mutant 分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Deoxyuridine 5'-triphosphate nucleotidohydrolase, ... 著者 Toth, J, Vertessy, B.G, Leveles, I, Bendes, A. 登録日 2012-07-31 公開日 2013-07-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 RAMD identification of substrate binding pathways to the active site of dUTPase To be Published
2BLN	N-terminal formyltransferase domain of ArnA in complex with N-5- formyltetrahydrofolate and UMP 分子名称: ACETATE ION, N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid, PROTEIN YFBG, ... 著者 Williams, G.J, Breazeale, S.D, Raetz, C.R.H, Naismith, J.H. 登録日 2005-03-07 公開日 2005-04-08 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Structure and Function of Both Domains of Arna, a Dual Function Decarboxylase and a Formyltransferase, Involved in 4-Amino-4-Deoxy-L-Arabinose Biosynthesis. J.Biol.Chem., 280, 2005
3Q5U	A minimal NLS from human scramblase 4 complexed with importin alpha 分子名称: Importin subunit alpha-2, Phospholipid scramblase 4 著者 Bhardwaj, A, Cingolani, G. 登録日 2010-12-29 公開日 2011-06-29 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A Minimal Nuclear Localization Signal (NLS) in Human Phospholipid Scramblase 4 That Binds Only the Minor NLS-binding Site of Importin {alpha}1. J.Biol.Chem., 286, 2011
5R95	PanDDA analysis group deposition Form1 MAP kinase p38-alpha -- Fragment KCL093 in complex with MAP kinase p38-alpha 分子名称: 1,2-ETHANEDIOL, 1-(4-aminophenyl)pyrrole-2,5-dione, CHLORIDE ION, ... 著者 De Nicola, G.F, Nichols, C.E. 登録日 2020-03-04 公開日 2020-07-22 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Mining the PDB for Tractable Cases Where X-ray Crystallography Combined with Fragment Screens Can Be Used to Systematically Design Protein-Protein Inhibitors: Two Test Cases Illustrated by IL1 beta-IL1R and p38 alpha-TAB1 Complexes. J.Med.Chem., 63, 2020
3Q6L	Crystal Structure of Human Adipocyte Fatty Acid Binding Protein (FABP4) at 1.4 Ang. Resolution 分子名称: Fatty acid-binding protein, adipocyte 著者 Prasad, G.S, Carney, D, Small, V, Sankaran, B, Zwart, P.H. 登録日 2011-01-02 公開日 2011-01-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Crystal Structure of Human Adipocyte Fatty Acid Binding Protein (FABP4) at 1.4 Ang. Resolution To be Published
3GXN	Crystal structure of apo alpha-galactosidase A at pH 4.5 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-galactosidase A, SULFATE ION 著者 Lieberman, R.L. 登録日 2009-04-02 公開日 2009-05-05 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 Effects of pH and iminosugar pharmacological chaperones on lysosomal glycosidase structure and stability. Biochemistry, 48, 2009
2ZJY	Structure of the K349P mutant of Gi alpha 1 subunit bound to ALF4 and GDP 分子名称: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i), alpha-1 subunit, ... 著者 Morikawa, T, Muroya, A, Sugio, S, Wakamatsu, K, Kohno, T. 登録日 2008-03-11 公開日 2009-03-24 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 How GPCRs activate G proteins: Structural changes form C-terminal tail to GDP binding pocket To be Published

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