PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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2BEF	CRYSTAL STRUCTURE OF NDP KINASE COMPLEXED WITH MG, ADP, AND BEF3 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ... 著者 Xu, Y.W, Cherfils, J. 登録日 1998-05-26 公開日 1998-08-12 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 AlF3 mimics the transition state of protein phosphorylation in the crystal structure of nucleoside diphosphate kinase and MgADP. Proc.Natl.Acad.Sci.USA, 94, 1997
3WWX	Crystal structure of D-stereospecific amidohydrolase from Streptomyces sp. 82F2 分子名称: OCTANE 1,8-DIAMINE, S12 family peptidase 著者 Arima, J, Nagano, S, Hino, T, Shimone, K, Isoda, Y, Mori, N. 登録日 2014-07-03 公開日 2015-07-08 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Crystal structure of D-stereospecific amidohydrolase from Streptomyces sp. 82F2 - insight into the structural factors for substrate specificity. Febs J., 283, 2016
4QXX	Structure of the amyloid forming peptide GNLVS (residues 26-30) from the eosinophil major basic protein (EMBP) 分子名称: Bone marrow proteoglycan 著者 Soriaga, A.B, Soragni, A, Sawaya, M.R, Eisenberg, D. 登録日 2014-07-22 公開日 2015-03-18 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.445 Å) 主引用文献 Toxicity of Eosinophil MBP Is Repressed by Intracellular Crystallization and Promoted by Extracellular Aggregation. Mol.Cell, 57, 2015
1QKQ	CHARCOT-LEYDEN CRYSTAL PROTEIN - MANNOSE COMPLEX 分子名称: EOSINOPHIL LYSOPHOSPHOLIPASE, alpha-D-mannopyranose 著者 Swaminathan, G.J, Leonidas, D.D, Acharya, K.R. 登録日 1999-07-31 公開日 2000-01-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Selective recognition of mannose by the human eosinophil Charcot-Leyden crystal protein (galectin-10): a crystallographic study at 1.8 A resolution. Biochemistry, 38, 1999
2FHO	NMR solution structure of the human spliceosomal protein complex p14-SF3b155 分子名称: spliceosomal protein SF3b155, spliceosomal protein p14 著者 Kuwasako, K, Dohmae, N, Inoue, M, Shirouzu, M, Guntert, P, Seraphin, B, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-12-26 公開日 2006-12-26 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 NMR solution structure of the human spliceosomal protein complex p14-SF3b155 To be Published
6JOH	The crystal of nucleoside diphosphate kinase from Aspergillus flavus 分子名称: Nucleoside diphosphate kinase 著者 Wang, Y, Wang, S, Wang, S.H. 登録日 2019-03-21 公開日 2020-01-29 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Molecular and structural basis of Nucleoside Diphosphate Kinase regulating the spores and sclerotia development in Aspergillus flavus To Be Published
4ZB4	Spliceosome component 分子名称: Pre-mRNA-processing factor 19 著者 Rocha de Moura, T, Pena, P. 登録日 2015-04-14 公開日 2016-09-14 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Spliceosome component To Be Published
8H6K	Cryo-EM structure of human exon-defined spliceosome in the mature B state. 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ... 著者 Zhang, W, Zhan, X, Zhang, X, Bai, R, Lei, J, Yan, C, Shi, Y. 登録日 2022-10-18 公開日 2024-05-01 最終更新日 2024-10-30 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Structural insights into human exon-defined spliceosome prior to activation. Cell Res., 34, 2024
8H6J	Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state. 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ... 著者 Zhang, W, Zhan, X, Zhang, X, Lei, J, Yan, C, Shi, Y. 登録日 2022-10-18 公開日 2024-05-01 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.25 Å) 主引用文献 Structural insights into human exon-defined spliceosome prior to activation. Cell Res., 34, 2024
8H6E	Cryo-EM structure of human exon-defined spliceosome in the late pre-B state. 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ... 著者 Zhang, W, Zhan, X, Zhang, X, Bai, R, Lei, J, Yan, C, Shi, Y. 登録日 2022-10-17 公開日 2024-05-01 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural insights into human exon-defined spliceosome prior to activation. Cell Res., 34, 2024
8H6L	Cryo-EM structure of human exon-defined spliceosome in the early B state. 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ... 著者 Zhang, W, Zhan, X, Zhang, X, Bai, R, Lei, J, Yan, C, Shi, Y. 登録日 2022-10-18 公開日 2024-05-01 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Structural insights into human exon-defined spliceosome prior to activation. Cell Res., 34, 2024
9DKZ	In situ microED structure of the Eosinophil major basic protein-1 分子名称: Bone marrow proteoglycan 著者 Yang, J.E, Bingman, C.A, Mitchell, J, Mosher, D, Wright, E.R. 登録日 2024-09-10 公開日 2024-09-25 最終更新日 2024-11-13 実験手法 ELECTRON CRYSTALLOGRAPHY (3.2 Å) 主引用文献 In situ crystalline structure of the human eosinophil major basic protein-1. Biorxiv, 2024
7DCO	Cryo-EM structure of the activated spliceosome (Bact complex) at an atomic resolution of 2.5 angstrom 分子名称: BJ4_G0014900.mRNA.1.CDS.1, BJ4_G0027490.mRNA.1.CDS.1, BJ4_G0037700.mRNA.1.CDS.1, ... 著者 Bai, R, Wan, R, Yan, C, Qi, J, Zhang, P, Lei, J, Shi, Y. 登録日 2020-10-26 公開日 2021-03-17 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Mechanism of spliceosome remodeling by the ATPase/helicase Prp2 and its coactivator Spp2. Science, 371, 2021
1JIM	STEREOSPECIFIC REACTION OF 3-METHOXY-4-CHLORO-7-AMINOISOCOUMARIN WITH CRYSTALLINE PORCINE PANCREATIC ELASTASE 分子名称: METHYL(2-ACETOXY-2-(2-CARBOXY-4-AMINO-PHENYL))ACETATE, PORCINE PANCREATIC ELASTASE, SULFATE ION 著者 Meyer, E. 登録日 1993-03-19 公開日 1994-01-31 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Stereospecific Reaction of 3-Methoxy-4-Chloro-7-Aminoisocoumarin with Crystalline Porcine Pancreatic Elastase J.Am.Chem.Soc., 107, 1985
8QVZ	Human NDPK-C in complex with cAMP 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Nucleoside diphosphate kinase 3, SULFATE ION 著者 Werten, S, Amjadi, R, Scheffzek, K. 登録日 2023-10-18 公開日 2024-09-18 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.774 Å) 主引用文献 Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes. Int J Mol Sci, 25, 2024
8QW1	Human NDPK-C in complex with ADP and Mg2+ 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase 3 著者 Werten, S, Amjadi, R, Scheffzek, K. 登録日 2023-10-18 公開日 2024-09-18 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes. Int J Mol Sci, 25, 2024
8QW3	Human NDPK-C in complex with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase 3, SULFATE ION 著者 Werten, S, Amjadi, R, Scheffzek, K. 登録日 2023-10-18 公開日 2024-09-18 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.255 Å) 主引用文献 Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes. Int J Mol Sci, 25, 2024
8QW0	Human NDPK-C in complex with GDP 分子名称: GUANOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase 3, SULFATE ION 著者 Werten, S, Amjadi, R, Scheffzek, K. 登録日 2023-10-18 公開日 2024-09-18 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.175 Å) 主引用文献 Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes. Int J Mol Sci, 25, 2024
8QW2	Human NDPK-C in complex with UDP and Mg2+ 分子名称: MAGNESIUM ION, Nucleoside diphosphate kinase 3, URIDINE-5'-DIPHOSPHATE 著者 Werten, S, Amjadi, R, Scheffzek, K. 登録日 2023-10-18 公開日 2024-09-18 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes. Int J Mol Sci, 25, 2024
9EMX	Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 Double Mutant Y7F A9S bound to Cordycepin 分子名称: 3'-DEOXYADENOSINE, Nucleoside 2-deoxyribosyltransferase 著者 Tang, P, Harding, C.J, Czekster, C.M. 登録日 2024-03-11 公開日 2025-05-07 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Engineered nucleoside 2'-deoxyribonsyltransferase enzymes enable scalable synthesis of diverse nucleoside analogues To Be Published
9EMW	Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 Y7F Mutant bound to ImmH-Forodesine 分子名称: 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, Nucleoside 2-deoxyribosyltransferase 著者 Tang, P, Harding, C.J, Czekster, C.M. 登録日 2024-03-11 公開日 2025-05-14 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Engineered nucleoside 2'-deoxyribonsyltransferase enzymes enable scalable synthesis of diverse nucleoside analogues To Be Published
9GD8	NME1 94-Diphosphoserine 分子名称: Nucleoside diphosphate kinase A 著者 Roderer, D, Schoepf, F, Fiedler, D, Celik, A. 登録日 2024-08-05 公開日 2025-06-11 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Nucleoside diphosphate kinase A (NME1) catalyzes its own oligophosphorylation To Be Published
9GD9	NME1 94-Oligophosphoserine 分子名称: Nucleoside diphosphate kinase A 著者 Roderer, D, Schoepf, F, Fiedler, D, Celik, A. 登録日 2024-08-05 公開日 2025-06-11 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Nucleoside diphosphate kinase A (NME1) catalyzes its own oligophosphorylation To Be Published
9GD6	NME1 94-Phosphoserine 分子名称: Nucleoside diphosphate kinase A 著者 Roderer, D, Schoepf, F, Fiedler, D, Celik, A. 登録日 2024-08-05 公開日 2025-06-11 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Nucleoside diphosphate kinase A (NME1) catalyzes its own oligophosphorylation To Be Published
9DWF	Nucleosome containing a 1-nt gap at SHL-4.5 分子名称: 601 I strand (damaged strand 1), 601 J strand (non-damaged strand), 601 K strand (damaged strand 2), ... 著者 Weaver, T.M, Ryan, B.J, Freudenthal, B.D. 登録日 2024-10-09 公開日 2025-01-15 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Nucleosome containing a 1-nt gap at SHL-4.5 To Be Published

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