Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3A4Z
DownloadVisualize
BU of 3a4z by Molmil
Structure of cytochrome P450 Vdh mutant (Vdh-K1) obtained by directed evolution
分子名称: ACETATE ION, CALCIUM ION, GLYCEROL, ...
著者Yasutake, Y, Fujii, Y, Cheon, W.K, Arisawa, A, Tamura, T.
登録日2009-07-24
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural evidence for enhancement of sequential vitamin D3 hydroxylation activities by directed evolution of cytochrome P450 vitamin D3 hydroxylase
J.Biol.Chem., 285, 2010
1R3C
DownloadVisualize
BU of 1r3c by Molmil
THE STRUCTURE OF P38ALPHA C162S MUTANT
分子名称: MAGNESIUM ION, Mitogen-activated protein kinase 14
著者Patel, S.B, Cameron, P.M, Frantz-Wattley, B, O'Neill, E, Becker, J.W, Scapin, G.
登録日2003-10-01
公開日2004-01-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Lattice stabilization and enhanced diffraction in human p38 alpha crystals by protein engineering.
Biochim.Biophys.Acta, 1696, 2004
1R39
DownloadVisualize
BU of 1r39 by Molmil
THE STRUCTURE OF P38ALPHA
分子名称: Mitogen-activated protein kinase 14, SULFATE ION
著者Patel, S.B, Cameron, P.M, Frantz-Wattley, B, O'Neill, E, Becker, J.W, Scapin, G.
登録日2003-10-01
公開日2004-01-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Lattice stabilization and enhanced diffraction in human p38 alpha crystals by protein engineering.
Biochim.Biophys.Acta, 1696, 2004
3A50
DownloadVisualize
BU of 3a50 by Molmil
Structure of cytochrome P450 Vdh mutant (Vdh-K1) obtained by directed evolution with bound vitamin D3
分子名称: (1S,3Z)-3-[(2E)-2-[(1R,3AR,7AS)-7A-METHYL-1-[(2R)-6-METHYLHEPTAN-2-YL]-2,3,3A,5,6,7-HEXAHYDRO-1H-INDEN-4-YLIDENE]ETHYLI DENE]-4-METHYLIDENE-CYCLOHEXAN-1-OL, ACETATE ION, CALCIUM ION, ...
著者Yasutake, Y, Fujii, Y, Cheon, W.K, Arisawa, A, Tamura, T.
登録日2009-07-24
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural evidence for enhancement of sequential vitamin D3 hydroxylation activities by directed evolution of cytochrome P450 vitamin D3 hydroxylase
J.Biol.Chem., 285, 2010
1K5K
DownloadVisualize
BU of 1k5k by Molmil
Homonuclear 1H Nuclear Magnetic Resonance Assignment and Structural Characterization of HIV-1 Tat Mal Protein
分子名称: TAT protein
著者Gregoire, C, Peloponese, J.M, Esquieu, D, Opi, S, Campbell, G, Solomiac, M, Lebrun, E, Lebreton, J, Loret, E.P.
登録日2001-10-11
公開日2002-06-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Homonuclear (1)H-NMR assignment and structural characterization of human immunodeficiency virus type 1 Tat Mal protein.
Biopolymers, 62, 2001
6K9S
DownloadVisualize
BU of 6k9s by Molmil
Structure of the Carbonylruthenium Mesoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan
分子名称: (2S)-2-[[(1R,4aR,4bR,10aR)-1,4a-dimethyl-7-propan-2-yl-2,3,4,4b,5,6,10,10a-octahydrophenanthren-1-yl]carbonylamino]-3-( 1H-indol-3-yl)propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, CARBON MONOXIDE, ...
著者Stanfield, J.K, Omura, K, Kasai, C, Sugimoto, H, Shiro, Y, Watanabe, Y, Shoji, O.
登録日2019-06-17
公開日2020-03-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystals in Minutes: Instant On-Site Microcrystallisation of Various Flavours of the CYP102A1 (P450BM3) Haem Domain.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JZS
DownloadVisualize
BU of 6jzs by Molmil
Structure of the Manganese Protoporphyrin IX-Reconstituted CYP102A1 Haem Domain with N-Abietoyl-L-Tryptophan in complex with Pyridine
分子名称: (2S)-2-[[(1R,4aR,4bR,10aR)-1,4a-dimethyl-7-propan-2-yl-2,3,4,4b,5,6,10,10a-octahydrophenanthren-1-yl]carbonylamino]-3-( 1H-indol-3-yl)propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, GLYCEROL, ...
著者Stanfield, J.K, Omura, K, Matsumoto, A, Kasai, C, Sugimoto, H, Shiro, Y, Watanabe, Y, Shoji, O.
登録日2019-05-03
公開日2020-03-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Crystals in Minutes: Instant On-Site Microcrystallisation of Various Flavours of the CYP102A1 (P450BM3) Haem Domain.
Angew.Chem.Int.Ed.Engl., 59, 2020
3QDR
DownloadVisualize
BU of 3qdr by Molmil
Structural characterization of the interaction of colicin A, colicin N, and TolB with the TolAIII translocon
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Colicin-A, Protein tolA
著者Li, C.
登録日2011-01-19
公開日2012-01-25
最終更新日2012-06-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural Evidence That Colicin A Protein Binds to a Novel Binding Site of TolA Protein in Escherichia coli Periplasm.
J.Biol.Chem., 287, 2012
3KJ2
DownloadVisualize
BU of 3kj2 by Molmil
Mcl-1 in complex with Bim BH3 mutant F4aE
分子名称: ACETATE ION, Bcl-2-like protein 11, Induced myeloid leukemia cell differentiation protein Mcl-1, ...
著者Fire, E, Grant, R.A, Keating, A.E.
登録日2009-11-02
公開日2010-02-16
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.351 Å)
主引用文献Mcl-1-Bim complexes accommodate surprising point mutations via minor structural changes.
Protein Sci., 19, 2010
3QN1
DownloadVisualize
BU of 3qn1 by Molmil
Crystal structure of the PYR1 Abscisic Acid receptor in complex with the HAB1 type 2C phosphatase catalytic domain
分子名称: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, Abscisic acid receptor PYR1, MANGANESE (II) ION, ...
著者Betz, K, Dupeux, F, Santiago, J, Marquez, J.A.
登録日2011-02-07
公開日2011-03-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Modulation of Abscisic Acid Signaling in Vivo by an Engineered Receptor-Insensitive Protein Phosphatase Type 2C Allele.
Plant Physiol., 156, 2011
6L3A
DownloadVisualize
BU of 6l3a by Molmil
Cytochrome P450 107G1 (RapN) with everolimus
分子名称: Cytochrome P450, Everolimus, PROTOPORPHYRIN IX CONTAINING FE
著者Km, V.C, Kim, D.H, Lim, Y.R, Lee, I.H, Lee, J.H, Kang, L.W.
登録日2019-10-10
公開日2020-09-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural insights into CYP107G1 from rapamycin-producing Streptomyces rapamycinicus.
Arch.Biochem.Biophys., 692, 2020
6L39
DownloadVisualize
BU of 6l39 by Molmil
Cytochrome P450 107G1 (RapN)
分子名称: Cytochrome P450, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
著者Kim, V.C, Kim, D.H, Lim, Y.R, Lee, I.H, Lee, J.H, Kang, L.W.
登録日2019-10-10
公開日2020-09-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Structural insights into CYP107G1 from rapamycin-producing Streptomyces rapamycinicus.
Arch.Biochem.Biophys., 692, 2020
7Q4E
DownloadVisualize
BU of 7q4e by Molmil
Local refinement structure of a single N-domain of full-length, dimeric, soluble somatic angiotensin I-converting enzyme
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lubbe, L, Sewell, B.T, Sturrock, E.D.
登録日2021-10-30
公開日2022-07-20
最終更新日2022-08-24
実験手法ELECTRON MICROSCOPY (3.63 Å)
主引用文献Cryo-EM reveals mechanisms of angiotensin I-converting enzyme allostery and dimerization.
Embo J., 41, 2022
4DK1
DownloadVisualize
BU of 4dk1 by Molmil
Crystal Structure of MacA-MexA chimeric protein, containing the Pseudomonas aeruginosa MexA alpha-hairpin domain.
分子名称: Putative MacA, Multidrug resistance protein mexA
著者Xu, Y, Ha, N.C.
登録日2012-02-03
公開日2012-03-07
最終更新日2017-08-23
実験手法X-RAY DIFFRACTION (3.499 Å)
主引用文献Assembly and channel opening of outer membrane protein in tripartite drug efflux pumps of Gram-negative bacteria.
J.Biol.Chem., 287, 2012
1F2L
DownloadVisualize
BU of 1f2l by Molmil
CRYSTAL STRUCTURE OF CHEMOKINE DOMAIN OF FRACTALKINE
分子名称: FRACTALKINE
著者Hoover, D.M, Mizoue, L.S, Handel, T.M, Lubkowski, J.
登録日2000-05-26
公開日2000-09-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of the chemokine domain of fractalkine shows a novel quaternary arrangement.
J.Biol.Chem., 275, 2000
3FFE
DownloadVisualize
BU of 3ffe by Molmil
Structure of Achromobactin Synthetase Protein D, (AcsD)
分子名称: AcsD
著者McMahon, S.A, Liu, H, Carter, L, Oke, M, Johnson, K.A, Schmelz, S, Challis, G.L, White, M.F, Naismith, J.H, Scottish Structural Proteomics Facility (SSPF)
登録日2008-12-03
公開日2009-02-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献AcsD catalyzes enantioselective citrate desymmetrization in siderophore biosynthesis
Nat.Chem.Biol., 5, 2009
3LCB
DownloadVisualize
BU of 3lcb by Molmil
The crystal structure of isocitrate dehydrogenase kinase/phosphatase in complex with its substrate, isocitrate dehydrogenase, from Escherichia coli.
分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Isocitrate dehydrogenase [NADP], ...
著者Zheng, J, Jia, Z.
登録日2010-01-10
公開日2010-04-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the bifunctional isocitrate dehydrogenase kinase/phosphatase.
Nature, 465, 2010
7ACW
DownloadVisualize
BU of 7acw by Molmil
LID/HID (LMW SLP and HMW SLP interacting domains) from C. difficile (R7404 strain)
分子名称: S-layer protein
著者Barwinska-Sendra, A, Lanzoni-Mangutchi, P, Basle, A, Salgado, P.S.
登録日2020-09-11
公開日2022-03-09
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and assembly of the S-layer in C. difficile.
Nat Commun, 13, 2022
2X3K
DownloadVisualize
BU of 2x3k by Molmil
CO-COMPLEX STRUCTURE OF ACHROMOBACTIN SYNTHETASE PROTEIN D (ACSD) WITH AMP AND SULFATE FROM PECTOBACTERIUM CHRYSANTHEMI
分子名称: ACSD, ADENOSINE MONOPHOSPHATE, SULFATE ION
著者Schmelz, S, Naismith, J.H.
登録日2010-01-25
公開日2010-11-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Adenylate Forming Enzymes Involved in Nrps-Independent Siderophore Biosynthesis
Ph D Thesis, 2010
3K3L
DownloadVisualize
BU of 3k3l by Molmil
Crystal structure of Siderocalin (NGAL, Lipocalin 2) complexed with apo Enterobactin
分子名称: 2,3-DIHYDROXY-BENZOIC ACID, 2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID, CHLORIDE ION, ...
著者Clifton, M.C.
登録日2009-10-02
公開日2010-08-18
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Parsing the functional specificity of Siderocalin / Lipocalin 2 / NGAL for siderophores and related small-molecule ligands
To be Published
1OF1
DownloadVisualize
BU of 1of1 by Molmil
KINETICS AND CRYSTAL STRUCTURE OF THE HERPES SIMPLEX VIRUS TYPE 1 THYMIDINE KINASE INTERACTING WITH (SOUTH)-METHANOCARBA-THYMIDINE
分子名称: (SOUTH)-METHANOCARBA-THYMIDINE, SULFATE ION, THYMIDINE KINASE
著者Claus, M.T, Schelling, P, Folkers, G, Marquez, V.E, Scapozza, L, Schulz, G.E.
登録日2003-04-03
公開日2004-06-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Biochemical and Structural Characterization of (South)-Methanocarbathymidine that Specifically Inhibits Growth of Herpes Simplex Virus Type 1 Thymidine Kinase-Transduced Osteosarcoma Cells
J.Biol.Chem., 279, 2004
2FWM
DownloadVisualize
BU of 2fwm by Molmil
Crystal Structure of E. coli EntA, a 2,3-dihydrodihydroxy benzoate dehydrogenase
分子名称: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
著者Gulick, A.M, Duax, W.L.
登録日2006-02-02
公開日2006-06-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Determination of the crystal structure of EntA, a 2,3-dihydro-2,3-dihydroxybenzoic acid dehydrogenase from Escherichia coli.
Acta Crystallogr.,Sect.D, 62, 2006
7EAF
DownloadVisualize
BU of 7eaf by Molmil
Crystal structure of SAM-I riboswitch with the Actinomyces-1 k-turn
分子名称: BARIUM ION, RNA (94-MER), S-ADENOSYLMETHIONINE, ...
著者Huang, L, Lilley, D.M.J.
登録日2021-03-07
公開日2021-06-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure and folding of four putative kink turns identified in structured RNA species in a test of structural prediction rules.
Nucleic Acids Res., 49, 2021
6VHF
DownloadVisualize
BU of 6vhf by Molmil
Crystal structure of RbBP5 interacting domain of Cfp1
分子名称: PHD-type domain-containing protein, ZINC ION
著者Joshi, M, Couture, J.F.
登録日2020-01-09
公開日2020-01-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.311 Å)
主引用文献A non-canonical monovalent zinc finger stabilizes the integration of Cfp1 into the H3K4 methyltransferase complex COMPASS.
Nucleic Acids Res., 48, 2020
7WIX
DownloadVisualize
BU of 7wix by Molmil
Cryo-EM structure of Mycobacterium tuberculosis irtAB in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Mycobactin import ATP-binding/permease protein IrtA, ...
著者Zhang, B, Sun, S, Yang, H, Rao, Z.
登録日2022-01-05
公開日2023-01-25
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3.53 Å)
主引用文献Cryo-EM structures for the Mycobacterium tuberculosis iron-loaded siderophore transporter IrtAB.
Protein Cell, 14, 2023

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon