PDB: 1138 件ウェブページステータス検索Chemie searchBIRD

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2K17	Solution structure of the TAF3 PHD domain in complex with a H3K4me3 peptide 分子名称: H3K4me3 peptide, Transcription initiation factor TFIID subunit 3, ZINC ION 著者 van Ingen, H, van Schaik, F.M.A, Wienk, H, Timmers, M, Boelens, R. 登録日 2008-02-22 公開日 2008-07-15 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Recognition of the H3K4me3 mark by the TAF3-PHD finger To be Published
3JCP	Structure of yeast 26S proteasome in M2 state derived from Titan dataset 分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... 著者 Luan, B, Huang, X.L, Wu, J.P, Shi, Y.G, Wang, F. 登録日 2016-01-06 公開日 2016-06-15 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structure of an endogenous yeast 26S proteasome reveals two major conformational states. Proc.Natl.Acad.Sci.USA, 113, 2016
3JCO	Structure of yeast 26S proteasome in M1 state derived from Titan dataset 分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... 著者 Luan, B, Huang, X.L, Wu, J.P, Shi, Y.G, Wang, F. 登録日 2016-01-06 公開日 2016-06-15 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Structure of an endogenous yeast 26S proteasome reveals two major conformational states. Proc.Natl.Acad.Sci.USA, 113, 2016
3K7A	Crystal Structure of an RNA polymerase II-TFIIB complex 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Liu, X, Bushnell, D.A, Wang, D, Calero, G, Kornberg, R.D. 登録日 2009-10-12 公開日 2009-11-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Structure of an RNA polymerase II-TFIIB complex and the transcription initiation mechanism. Science, 327, 2010
6J30	yeast proteasome in Ub-engaged state (C2) 分子名称: 26S proteasome complex subunit SEM1, 26S proteasome regulatory subunit 4 homolog, 26S proteasome regulatory subunit 6A, ... 著者 Cong, Y. 登録日 2019-01-03 公開日 2019-03-20 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations. Mol. Cell, 73, 2019
6J2N	yeast proteasome in substrate-processing state (C3-b) 分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... 著者 Cong, Y. 登録日 2019-01-02 公開日 2019-03-20 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (7.5 Å) 主引用文献 Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations. Mol. Cell, 73, 2019
6J2C	Yeast proteasome in translocation competent state (C3-a) 分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... 著者 Cong, Y. 登録日 2019-01-01 公開日 2019-03-13 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (7 Å) 主引用文献 Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations. Mol. Cell, 73, 2019
6J2X	Yeast proteasome in resting state (C1-a) 分子名称: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASOME REGULATORY SUBUNIT RPN5, 26S proteasome complex subunit SEM1, ... 著者 Cong, Y. 登録日 2019-01-03 公開日 2019-03-13 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations. Mol. Cell, 73, 2019
6J2Q	Yeast proteasome in Ub-accepted state (C1-b) 分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... 著者 Cong, Y. 登録日 2019-01-02 公開日 2019-03-13 最終更新日 2019-04-10 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations. Mol. Cell, 73, 2019
6EF1	Yeast 26S proteasome bound to ubiquitinated substrate (5D motor state) 分子名称: 26S proteasome regulatory subunit 4 homolog, 26S proteasome regulatory subunit 6A, 26S proteasome regulatory subunit 6B homolog, ... 著者 de la Pena, A.H, Goodall, E.A, Gates, S.N, Lander, G.C, Martin, A. 登録日 2018-08-15 公開日 2018-10-17 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (4.73 Å) 主引用文献 Substrate-engaged 26Sproteasome structures reveal mechanisms for ATP-hydrolysis-driven translocation. Science, 362, 2018
6EF2	Yeast 26S proteasome bound to ubiquitinated substrate (5T motor state) 分子名称: 26S proteasome regulatory subunit 4 homolog, 26S proteasome regulatory subunit 6A, 26S proteasome regulatory subunit 6B homolog, ... 著者 de la Pena, A.H, Goodall, E.A, Gates, S.N, Lander, G.C, Martin, A. 登録日 2018-08-15 公開日 2018-10-17 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (4.27 Å) 主引用文献 Substrate-engaged 26Sproteasome structures reveal mechanisms for ATP-hydrolysis-driven translocation. Science, 362, 2018
4R7V	Crystal structure of N-lobe of human ARRDC3(1-165) 分子名称: Arrestin domain-containing protein 3 著者 Qi, S, Hurley, J. 登録日 2014-08-28 公開日 2014-10-01 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Insights into beta 2-adrenergic receptor binding from structures of the N-terminal lobe of ARRDC3. Protein Sci., 23, 2014
6EF3	Yeast 26S proteasome bound to ubiquitinated substrate (4D motor state) 分子名称: 26S proteasome regulatory subunit 4 homolog, 26S proteasome regulatory subunit 6A, 26S proteasome regulatory subunit 6B homolog, ... 著者 de la Pena, A.H, Goodall, E.A, Gates, S.N, Lander, G.C, Martin, A. 登録日 2018-08-15 公開日 2018-10-17 最終更新日 2020-01-08 実験手法 ELECTRON MICROSCOPY (4.17 Å) 主引用文献 Substrate-engaged 26Sproteasome structures reveal mechanisms for ATP-hydrolysis-driven translocation. Science, 362, 2018
4R7X	Crystal structure of N-lobe of human ARRDC3(1-180) 分子名称: Arrestin domain-containing protein 3, PHOSPHATE ION 著者 Qi, S, Hurley, J. 登録日 2014-08-28 公開日 2014-10-01 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 Insights into beta 2-adrenergic receptor binding from structures of the N-terminal lobe of ARRDC3. Protein Sci., 23, 2014
3UK6	Crystal Structure of the Tip48 (Tip49b) hexamer 分子名称: ADENOSINE-5'-DIPHOSPHATE, RuvB-like 2 著者 Petukhov, M, Dagkessamanskaja, A, Bommer, M, Barrett, T, Tsaneva, I, Yakimov, A, Queval, R, Shvetsov, A, Khodorkovskiy, M, Kas, E, Grigoriev, M. 登録日 2011-11-09 公開日 2012-07-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Large-Scale Conformational Flexibility Determines the Properties of AAA+ TIP49 ATPases. Structure, 20, 2012
3WHK	Crystal structure of PAN-Rpt5C chimera 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A 著者 Satoh, T, Saeki, Y, Hiromoto, T, Wang, Y.-H, Uekusa, Y, Yagi, H, Yoshihara, H, Yagi-Utsumi, M, Mizushima, T, Tanaka, K, Kato, K. 登録日 2013-08-26 公開日 2014-03-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural basis for proteasome formation controlled by an assembly chaperone nas2. Structure, 22, 2014
6EF0	Yeast 26S proteasome bound to ubiquitinated substrate (1D* motor state) 分子名称: 26S proteasome regulatory subunit 4 homolog, 26S proteasome regulatory subunit 6A, 26S proteasome regulatory subunit 6B homolog, ... 著者 de la Pena, A.H, Goodall, E.A, Gates, S.N, Lander, G.C, Martin, A. 登録日 2018-08-15 公開日 2018-10-17 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (4.43 Å) 主引用文献 Substrate-engaged 26Sproteasome structures reveal mechanisms for ATP-hydrolysis-driven translocation. Science, 362, 2018
3WHL	Crystal structure of Nas2 N-terminal domain complexed with PAN-Rpt5C chimera 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Probable 26S proteasome regulatory subunit p27, Proteasome-activating nucleotidase, ... 著者 Satoh, T, Saeki, Y, Hiromoto, T, Wang, Y.-H, Uekusa, Y, Yagi, H, Yoshihara, H, Yagi-Utsumi, M, Mizushima, T, Tanaka, K, Kato, K. 登録日 2013-08-26 公開日 2014-03-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Structural basis for proteasome formation controlled by an assembly chaperone nas2. Structure, 22, 2014
4BBR	Structure of RNA polymerase II-TFIIB complex 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Sainsbury, S, Niesser, J, Cramer, P. 登録日 2012-09-27 公開日 2012-11-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structure and Function of the Initially Transcribing RNA Polymerase II-TFIIB Complex Nature, 493, 2013
2CQA	Solution structure of RSGI RUH-039, a fragment of C-terminal domain of RuvB-like 2 from human cDNA 分子名称: RuvB-like 2 著者 Abe, T, Hirota, H, Saito, K, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-05-19 公開日 2005-11-19 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of RSGI RUH-039, a fragment of C-terminal domain of RuvB-like 2 from human cDNA To be Published
2DWZ	Structure of the Oncoprotein Gankyrin in Complex with S6 ATPase of the 26S Proteasome 分子名称: 26S protease regulatory subunit 6B, 26S proteasome non-ATPase regulatory subunit 10, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID 著者 Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2006-08-22 公開日 2007-08-28 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of the Oncoprotein Gankyrin in Complex with S6 ATPase of the 26S Proteasome To be Published
2F69	Ternary complex of SET7/9 bound to AdoHcy and a TAF10 peptide 分子名称: Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7, S-ADENOSYL-L-HOMOCYSTEINE, ... 著者 Couture, J.-F, Collazo, E, Hauk, G, Trievel, R.C. 登録日 2005-11-28 公開日 2006-01-17 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Structural basis for the methylation site specificity of SET7/9 Nat.Struct.Mol.Biol., 13, 2006
2HDZ	Crystal Structure Analysis of the UBF HMG box5 分子名称: Nucleolar transcription factor 1 著者 Rong, H, Teng, M.K, Niu, L.W. 登録日 2006-06-21 公開日 2007-06-26 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of human upstream binding factor HMG box 5 and site for binding of the cell-cycle regulatory factor TAF1 Acta Crystallogr.,Sect.D, 63, 2007
5MPA	26S proteasome in presence of ATP (s2) 分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... 著者 Wehmer, M, Rudack, T, Beck, F, Aufderheide, A, Pfeifer, G, Plitzko, J.M, Foerster, F, Schulten, K, Baumeister, W, Sakata, E. 登録日 2016-12-16 公開日 2017-03-08 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Structural insights into the functional cycle of the ATPase module of the 26S proteasome. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5MPC	26S proteasome in presence of BeFx (s4) 分子名称: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... 著者 Wehmer, M, Rudack, T, Beck, F, Aufderheide, A, Pfeifer, G, Plitzko, J.M, Foerster, F, Schulten, K, Baumeister, W, Sakata, E. 登録日 2016-12-16 公開日 2017-03-08 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (7.7 Å) 主引用文献 Structural insights into the functional cycle of the ATPase module of the 26S proteasome. Proc. Natl. Acad. Sci. U.S.A., 114, 2017

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