PDB: 2044 件ウェブページステータス検索Chemie searchBIRD

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8U24	A Highly Stable Variant of Corynactis Californica Green Fluorescent Protein, ccGFP 9 分子名称: Green Fluorescent Protein Variant #9, ccGFP 9 著者 Hung, L.-W, Terwilliger, T.C, Waldo, G, Nguyen, H.B. 登録日 2023-09-05 公開日 2024-01-31 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Engineering highly stable variants of Corynactis californica green fluorescent proteins. Protein Sci., 33, 2024
5MA5	GFP-binding DARPin fusion gc_K11 分子名称: 1,2-ETHANEDIOL, CITRIC ACID, Green fluorescent protein, ... 著者 Hansen, S, Stueber, J, Ernst, P, Koch, A, Bojar, D, Batyuk, A, Plueckthun, A. 登録日 2016-11-03 公開日 2017-11-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Design and applications of a clamp for Green Fluorescent Protein with picomolar affinity. Sci Rep, 7, 2017
6T3A	Difference-refined structure of rsEGFP2 10 ns following 400-nm laser irradiation of the off-state determined by SFX 分子名称: Green fluorescent protein 著者 Woodhouse, J, Coquelle, N, Adam, V, Barends, T.R.M, De La Mora, E, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M. 登録日 2019-10-10 公開日 2020-02-19 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy. Nat Commun, 11, 2020
1E4Y	Mutant P9L of adenylate kinase from E. coli, modified in the Gly-loop 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE 著者 Mueller, C.W, Schulz, G.E. 登録日 2000-07-12 公開日 2000-08-04 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structures of two mutants of adenylate kinase from Escherichia coli that modify the Gly-loop. Proteins, 15, 1993
7VCM	crystal structure of GINKO1 分子名称: Green fluorescent protein,Potassium binding protein Kbp,Green fluorescent protein, POTASSIUM ION 著者 Wen, Y, Campbell, R.E, Lemieux, M.J. 登録日 2021-09-03 公開日 2022-07-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life. Plos Biol., 20, 2022
2AK3	THE THREE-DIMENSIONAL STRUCTURE OF THE COMPLEX BETWEEN MITOCHONDRIAL MATRIX ADENYLATE KINASE AND ITS SUBSTRATE AMP AT 1.85 ANGSTROMS RESOLUTION 分子名称: ADENOSINE MONOPHOSPHATE, ADENYLATE KINASE ISOENZYME-3, SULFATE ION 著者 Diederichs, K, Schulz, G.E. 登録日 1995-03-07 公開日 1995-05-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 The refined structure of the complex between adenylate kinase from beef heart mitochondrial matrix and its substrate AMP at 1.85 A resolution. J.Mol.Biol., 217, 1991
2AWL	Mature R96K GFP mutant 分子名称: MAGNESIUM ION, green fluorescent protein 著者 Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. 登録日 2005-09-01 公開日 2006-04-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis. Biochemistry, 44, 2005
4NDJ	Crystal Structure of a computational designed engrailed homeodomain variant fused with YFP 分子名称: Green fluorescent protein, chimeric construct,GFP-like fluorescent chromoprotein FP506, related 著者 Mou, Y, Mayo, S.L. 登録日 2013-10-26 公開日 2014-11-05 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants. J.Mol.Biol., 427, 2015
1ZIP	BACILLUS STEAROTHERMOPHILUS ADENYLATE KINASE 分子名称: ADENYLATE KINASE, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MANGANESE (II) ION, ... 著者 Berry, M.B, Phillips Jr, G.N. 登録日 1997-05-07 公開日 1997-08-20 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structures of Bacillus stearothermophilus adenylate kinase with bound Ap5A, Mg2+ Ap5A, and Mn2+ Ap5A reveal an intermediate lid position and six coordinate octahedral geometry for bound Mg2+ and Mn2+. Proteins, 32, 1998
1QBA	BACTERIAL CHITOBIASE, GLYCOSYL HYDROLASE FAMILY 20 分子名称: CHITOBIASE, SULFATE ION 著者 Tews, I, Perrakis, A, Oppenheim, A, Dauter, Z, Wilson, K.S, Vorgias, C.E. 登録日 1996-06-06 公開日 1997-01-11 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Bacterial chitobiase structure provides insight into catalytic mechanism and the basis of Tay-Sachs disease. Nat.Struct.Biol., 3, 1996
1E4V	Mutant G10V of adenylate kinase from E. coli, modified in the Gly-loop 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE 著者 Mueller, C.W, Schulz, G.E. 登録日 2000-07-12 公開日 2000-08-04 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structures of two mutants of adenylate kinase from Escherichia coli that modify the Gly-loop. Proteins, 15, 1993
1W7U	Photoproduct of the Wild-Type Aequorea victoria Green Fluorescent Protein after structural annealing at 170K 分子名称: GREEN FLUORESCENT PROTEIN 著者 Van Thor, J.J, Georgiev, G.Y, Towrie, M, Sage, J.T. 登録日 2004-09-09 公開日 2005-07-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Ultrafast and Low Barrier Motions in the Photoreactions of the Green Fluorescent Protein J.Biol.Chem., 280, 2005
2R37	Crystal structure of human glutathione peroxidase 3 (selenocysteine to glycine mutant) 分子名称: CHLORIDE ION, Glutathione peroxidase 3, SODIUM ION 著者 Pilka, E.S, Guo, K, Gileadi, O, Rojkowa, A, von Delft, F, Pike, A.C.W, Kavanagh, K.L, Johannson, C, Sundstrom, M, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Oppermann, U, Structural Genomics Consortium (SGC) 登録日 2007-08-29 公開日 2007-09-11 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structure of human glutathione peroxidase 3 (selenocysteine to glycine mutant). TO BE PUBLISHED
5T5C	A Novel domain in human EXOG converts apoptotic endonuclease to DNA-repair enzyme 分子名称: DNA (5'-D(P*CP*TP*GP*AP*CP*GP*TP*GP*C)-3'), DNA (5'-D(P*GP*CP*AP*CP*GP*TP*CP*AP*G)-3'), MAGNESIUM ION, ... 著者 Szymanski, M.R, Yin, W.Y. 登録日 2016-08-30 公開日 2017-05-17 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.851 Å) 主引用文献 A domain in human EXOG converts apoptotic endonuclease to DNA-repair exonuclease. Nat Commun, 8, 2017
6FP8	mTFP1/DARPin 1238_E11 complex in space group C2 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, DARPin1238_E11, ... 著者 Jakob, R.P, Vigano, M.A, Bieli, D, Matsuda, S, Schaefer, J.V, Pluckthun, A, Affolter, M, Maier, T. 登録日 2018-02-09 公開日 2018-10-03 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.855 Å) 主引用文献 DARPins recognizing mTFP1 as novel reagents forin vitroandin vivoprotein manipulations. Biol Open, 7, 2018
6T36	Crystal structure of the PTPN3 PDZ domain bound to the HBV core protein C-terminal peptide 分子名称: BROMIDE ION, Capsid protein, Tyrosine-protein phosphatase non-receptor type 3 著者 Genera, M, Mechaly, A, Haouz, A, Caillet-Saguy, C. 登録日 2019-10-10 公開日 2021-01-20 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Molecular basis of the interaction of the human tyrosine phosphatase PTPN3 with the hepatitis B virus core protein. Sci Rep, 11, 2021
1YB0	Structure of PlyL 分子名称: PHOSPHATE ION, ZINC ION, prophage LambdaBa02, ... 著者 Low, L.Y, Yang, C, Perego, M, Osterman, A, Liddington, R.C. 登録日 2004-12-18 公開日 2005-08-23 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Structure and lytic activity of a Bacillus anthracis prophage endolysin J.Biol.Chem., 280, 2005
3SSV	Engineered low-affinity halide-binding protein derived from YFP: fluoride complex 分子名称: FLUORIDE ION, Green fluorescent protein 著者 Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. 登録日 2011-07-08 公開日 2012-07-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.861 Å) 主引用文献 Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
5HGE	Filamentous Assembly of Green Fluorescent Protein Supported by a C-terminal fusion of 18-residues, viewed in space group P212121 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Green fluorescent protein 著者 Sawaya, M.R, Heller, D.M, McPartland, L, Hochschild, A, Eisenberg, D.S. 登録日 2016-01-08 公開日 2017-01-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.863 Å) 主引用文献 Green Fluorescent Protein Fusion that Self Assembles as Polar Filaments to be published
5Z6Y	Structure of sfYFP48S95C66BPA 分子名称: Green fluorescent protein 著者 Wang, J.Y, Wang, J.Y. 登録日 2018-01-25 公開日 2019-06-12 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 structure of sfYFP48S95C66BPA at 1.95 Angstroms resolution To Be Published
2YZC	Crystal structure of uricase from Arthrobacter globiformis in complex with allantoate 分子名称: ALLANTOATE ION, Uricase 著者 Juan, E.C.M, Hossain, M.T, Hoque, M.M, Suzuki, K, Sekiguchi, T, Takenaka, A. 登録日 2007-05-05 公開日 2008-05-06 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Trapping of the uric acid substrate in the crystal structure of urate oxidase from Arthrobacter globiformis To be Published
3URA	Crystal Structure of PTE mutant H254G/H257W/L303T/K185R/I274N/A80V/S61T 分子名称: COBALT (II) ION, IMIDAZOLE, Parathion hydrolase 著者 Tsai, P, Fox, N.G, Li, Y, Barondeau, D.P, Raushel, F.M. 登録日 2011-11-21 公開日 2012-08-01 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents. Biochemistry, 51, 2012
5H8D	Crystal structure of an ASC binding nanobody 分子名称: VHH nanobody 著者 Lu, A, Schmidt, F.I, Ruan, J, Tang, C, Wu, H, Ploegh, H.L. 登録日 2015-12-23 公開日 2016-04-06 最終更新日 2016-05-18 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 A single domain antibody fragment that recognizes the adaptor ASC defines the role of ASC domains in inflammasome assembly. J.Exp.Med., 213, 2016
8C1X	sfGFP C148 F206 mutant 分子名称: Green fluorescent protein 著者 Ahmed, R.D, Rizkallah, P.J, Jones, D.D. 登録日 2022-12-21 公開日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 sfGFP C148 F206 mutant To Be Published
5G3Z	Crystal structure of adenylate kinase ancestor 3 with Zn, Mg and Ap5A bound 分子名称: ADENYLATE KINSE, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ... 著者 Nguyen, V, Kutter, S, English, J, Kern, D. 登録日 2016-05-03 公開日 2016-12-28 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Evolutionary drivers of thermoadaptation in enzyme catalysis. Science, 355, 2017

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