PDB: 178322 件ウェブページステータス検索Chemie searchBIRD

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7Y85	CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease bound to self RNA target 分子名称: CHAT domain protein, MAGNESIUM ION, RAMP superfamily protein, ... 著者 Zhang, J.T, Cui, N, Huang, H.D, Jia, N. 登録日 2022-06-22 公開日 2022-12-14 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (2.73 Å) 主引用文献 Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase. Nat Commun, 13, 2022
7Y82	CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA complex bound to self RNA target 分子名称: MAGNESIUM ION, RAMP superfamily protein, Self RNA target, ... 著者 Zhang, J.T, Cui, N, Huang, H.D, Jia, N. 登録日 2022-06-22 公開日 2022-12-14 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (2.83 Å) 主引用文献 Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase. Nat Commun, 13, 2022
7Y83	CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease bound to non-self RNA target 分子名称: CHAT domain protein, MAGNESIUM ION, RAMP superfamily protein, ... 著者 Zhang, J.T, Cui, N, Huang, H.D, Jia, N. 登録日 2022-06-22 公開日 2022-12-14 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (2.93 Å) 主引用文献 Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase. Nat Commun, 13, 2022
7Y80	CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA binary complex 分子名称: MAGNESIUM ION, RAMP superfamily protein, ZINC ION, ... 著者 Zhang, J.T, Cui, N, Huang, H.D, Jia, N. 登録日 2022-06-22 公開日 2022-12-14 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (2.71 Å) 主引用文献 Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase. Nat Commun, 13, 2022
7Y84	CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease 分子名称: CHAT domain protein, MAGNESIUM ION, RAMP superfamily protein, ... 著者 Zhang, J.T, Cui, N, Huang, H.D, Jia, N. 登録日 2022-06-22 公開日 2022-12-14 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (2.61 Å) 主引用文献 Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase. Nat Commun, 13, 2022
7JQW	The external aldimine crystal structure of Salmonella typhimurium Tryptophan Synthase mutant beta-S377A in complex with cesium ion at the metal coordination site. The single beta-Q114 rotamer conformation allows a hydrogen bond to form with the PLP oxygen at the position 3 in the ring 分子名称: (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-serine, 1,2-ETHANEDIOL, 2-AMINOPHENOL, ... 著者 Hilario, E, Dunn, M.F, Mueller, L.J. 登録日 2020-08-11 公開日 2021-08-25 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The external aldimine crystal structure of Salmonella typhimurium Tryptophan Synthase mutant beta-S377A in complex with cesium ion at the metal coordination site. The single beta-Q114 rotamer conformation allows a hydrogen bond to form with the PLP oxygen at the position 3 in the ring. To be Published
2WU5	Crystal structure of the E. coli succinate:quinone oxidoreductase (SQR) SdhD His71Met mutant 分子名称: 2-METHYL-N-PHENYL-5,6-DIHYDRO-1,4-OXATHIINE-3-CARBOXAMIDE, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Ruprecht, J, Yankovskaya, V, Maklashina, E, Iwata, S, Cecchini, G. 登録日 2009-09-29 公開日 2010-08-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.803 Å) 主引用文献 Crystal Structure of the E. Coli Succinate:Quinone Oxidoreductase (Sqr) Sdhd His71met Mutant To be Published
6OXA	Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU) 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Pavelich, I.J, Hoffer, E.D, Maehigashi, T, Dunham, C.M. 登録日 2019-05-13 公開日 2019-08-21 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Monomeric YoeB toxin retains RNase activity but adopts an obligate dimeric form for thermal stability. Nucleic Acids Res., 47, 2019
2WU2	Crystal structure of the E. coli succinate:quinone oxidoreductase (SQR) SdhC His84Met mutant 分子名称: 2-METHYL-N-PHENYL-5,6-DIHYDRO-1,4-OXATHIINE-3-CARBOXAMIDE, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Ruprecht, J, Yankovskaya, V, Maklashina, E, Iwata, S, Cecchini, G. 登録日 2009-09-28 公開日 2010-08-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of the E. Coli Succinate:Quinone Oxidoreductase (Sqr) Sdhc His84met Mutant To be Published
6OXI	Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA) 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Pavelich, I.J, Hoffer, E.D, Maehigashi, T, Dunham, C.M. 登録日 2019-05-13 公開日 2019-08-21 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.495 Å) 主引用文献 Monomeric YoeB toxin retains RNase activity but adopts an obligate dimeric form for thermal stability. Nucleic Acids Res., 47, 2019
6OTR	Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU) 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Pavelich, I.P, Hoffer, E.D, Maehigashi, T, Dunham, C.M. 登録日 2019-05-03 公開日 2019-08-21 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.12 Å) 主引用文献 Monomeric YoeB toxin retains RNase activity but adopts an obligate dimeric form for thermal stability. Nucleic Acids Res., 47, 2019
6N7R	Saccharomyces cerevisiae spliceosomal E complex (ACT1) 分子名称: 56 kDa U1 small nuclear ribonucleoprotein component, ACT1 pre-mRNA, Pre-mRNA-processing factor 39, ... 著者 Liu, S, Li, X, Zhou, Z.H, Zhao, R. 登録日 2018-11-28 公開日 2019-09-18 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 A unified mechanism for intron and exon definition and back-splicing. Nature, 573, 2019
1TGV	Structure of E. coli Uridine Phosphorylase complexed with 5-Fluorouridine and sulfate 分子名称: 5-FLUOROURIDINE, POTASSIUM ION, SULFATE ION, ... 著者 Bu, W, Settembre, E.C, Sanders, J.M, Begley, T.P, Ealick, S.E. 登録日 2004-05-31 公開日 2005-06-14 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structures of E. coli Uridine Phosphorylase To be Published, 2004
6N7P	S. cerevisiae spliceosomal E complex (UBC4) 分子名称: 56 kDa U1 small nuclear ribonucleoprotein component, Nuclear cap-binding protein complex subunit 1, Nuclear cap-binding protein subunit 2, ... 著者 Liu, S, Li, X, Zhou, Z.H, Zhao, R. 登録日 2018-11-27 公開日 2019-09-18 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 A unified mechanism for intron and exon definition and back-splicing. Nature, 573, 2019
1MJW	STRUCTURE OF INORGANIC PYROPHOSPHATASE MUTANT D42N 分子名称: INORGANIC PYROPHOSPHATASE, SULFATE ION 著者 Oganesyan, V, Harutyunyan, E.H, Avaeva, S.M, Samygina, V.R, Huber, R. 登録日 1997-02-08 公開日 1997-12-03 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Three-dimensional structures of mutant forms of E. coli inorganic pyrophosphatase with Asp-->Asn single substitution in positions 42, 65, 70, and 97. Biochemistry Mosc., 63, 1998
1MJX	STRUCTURE OF INORGANIC PYROPHOSPHATASE MUTANT D65N 分子名称: INORGANIC PYROPHOSPHATASE, SULFATE ION 著者 Oganesyan, V, Harutyunyan, E.H, Avaeva, S.M, Huber, R. 登録日 1997-02-08 公開日 1997-12-03 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Three-dimensional structures of mutant forms of E. coli inorganic pyrophosphatase with Asp-->Asn single substitution in positions 42, 65, 70, and 97. Biochemistry Mosc., 63, 1998
1TGY	Structure of E. coli Uridine Phosphorylase complexed with uracil and ribose 1-phosphate 分子名称: 1-O-phosphono-alpha-D-ribofuranose, POTASSIUM ION, URACIL, ... 著者 Bu, W, Settembre, E.C, Sanders, J.M, Begley, T.P, Ealick, S.E. 登録日 2004-05-31 公開日 2005-06-14 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structures of E. coli Uridine Phosphorylase To be Published, 2004
1LEL	The avidin BCAP complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin, E-AMINO BIOTINYL CAPROIC ACID 著者 Pazy, Y, Kulik, T, Bayer, E.A, Wilchek, M, Livnah, O. 登録日 2002-04-10 公開日 2002-11-06 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Ligand exchange between proteins: exchange of biotin and biotin derivatives between avidin and streptavidin J.Biol.Chem., 277, 2002
5KTS	Crystal structure of Pyrococcus horikoshii quinolinate synthase (NadA) with bound citraconate and Fe4S4 cluster 分子名称: (~{Z})-2-methylbut-2-enedioic acid, AMMONIUM ION, CHLORIDE ION, ... 著者 Fenwick, M.K, Ealick, S.E. 登録日 2016-07-12 公開日 2016-07-27 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Crystal Structures of the Iron-Sulfur Cluster-Dependent Quinolinate Synthase in Complex with Dihydroxyacetone Phosphate, Iminoaspartate Analogues, and Quinolinate. Biochemistry, 55, 2016
8OXX	Transglutaminase 3 in complex with inhibitor Z-don and DH patient-derived Fab DH63-B02 分子名称: 1,2-ETHANEDIOL, 5-OXO-L-NORLEUCINE, Antibody fab fragment heavy chain, ... 著者 Heggelund, J.E, Sollid, L.M. 登録日 2023-05-02 公開日 2023-10-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Autoantibody binding and unique enzyme-substrate intermediate conformation of human transglutaminase 3. Nat Commun, 14, 2023
4TTG	Beta-galactosidase (E. coli) in the presence of potassium chloride. 分子名称: Beta-galactosidase, CHLORIDE ION, DIMETHYL SULFOXIDE, ... 著者 Juers, D.H. 登録日 2014-06-20 公開日 2015-03-25 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Elucidating factors important for monovalent cation selectivity in enzymes: E. coli beta-galactosidase as a model. Phys Chem Chem Phys, 17, 2015
4ERM	Crystal structure of the dATP inhibited E. coli class Ia ribonucleotide reductase complex at 4 Angstroms resolution 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Zimanyi, C.M, Drennan, C.L. 登録日 2012-04-20 公開日 2012-07-04 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.95 Å) 主引用文献 Tangled up in knots: structures of inactivated forms of E. coli class Ia ribonucleotide reductase. Structure, 20, 2012
7N6S	Crystal Structure of deoxyuridine 5'-triphosphate nucleotidohydrolase from Rickettsia prowazekii str. Madrid E in complex with 2'-deoxyuridine 5'-monophoephate (dUMP) 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Deoxyuridine 5'-triphosphate nucleotidohydrolase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2021-06-09 公開日 2021-06-23 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal Structure of deoxyuridine 5'-triphosphate nucleotidohydrolase from Rickettsia prowazekii str. Madrid E in complex with 2'-deoxyuridine 5'-monophoephate (dUMP) to be published
7N56	Crystal Structure of deoxyuridine 5'-triphosphate nucleotidohydrolase from Rickettsia prowazekii str. Madrid E 分子名称: Deoxyuridine 5'-triphosphate nucleotidohydrolase, SULFATE ION 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2021-06-04 公開日 2021-07-07 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal Structure of deoxyuridine 5'-triphosphate nucleotidohydrolase from Rickettsia prowazekii str. Madrid E to be published
2FZG	The Structure of Wild-Type E. Coli Aspartate Transcarbamoylase in Complex with Novel T State Inhibitors at 2.25 Resolution 分子名称: Aspartate carbamoyltransferase catalytic chain, Aspartate carbamoyltransferase regulatory chain, CYTIDINE-5'-TRIPHOSPHATE, ... 著者 Heng, S, Stieglitz, K.A, Eldo, J, Xia, J, Cardia, J.P, Kantrowitz, E.R. 登録日 2006-02-09 公開日 2006-08-29 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 T-state Inhibitors of E. coli Aspartate Transcarbamoylase that Prevent the Allosteric Transition. Biochemistry, 45, 2006

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