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9EAR
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BU of 9ear by Molmil
CHD1-nucleosome complex (closed state)
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromodomain-helicase-DNA-binding protein 1, ...
著者James, A.M, Farnung, L.
登録日2024-11-11
公開日2025-05-07
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis of human CHD1 nucleosome recruitment and pausing.
Mol.Cell, 85, 2025
2NZD
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BU of 2nzd by Molmil
Nucleosome core particle containing 145 bp of DNA
分子名称: DNA (145-MER), Histone H2B, Histone H3, ...
著者Ong, M.S, Richmond, T.J, Davey, C.A.
登録日2006-11-23
公開日2007-04-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献DNA stretching and extreme kinking in the nucleosome core
J.Mol.Biol., 368, 2007
1OFC
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BU of 1ofc by Molmil
nucleosome recognition module of ISWI ATPase
分子名称: 4-deoxy-alpha-D-glucopyranose, GLYCEROL, ISWI PROTEIN, ...
著者Grune, T, Muller, C.W.
登録日2003-04-10
公開日2003-09-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure and Functional Analysis of a Nucleosome Recognition Module of the Remodeling Factor Iswi
Mol.Cell, 12, 2003
7M7K
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BU of 7m7k by Molmil
Crystal structure of uridine bound to Geobacillus thermoglucosidasius pyrimidine nucleoside phosphorylase PyNP
分子名称: Pyrimidine-nucleoside phosphorylase, SULFATE ION, URIDINE
著者Pausch, P, Bange, G.
登録日2021-03-28
公開日2021-08-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Diversification of 4'-Methylated Nucleosides by Nucleoside Phosphorylases
Acs Catalysis, 2021
1JXV
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BU of 1jxv by Molmil
Crystal Structure of Human Nucleoside Diphosphate Kinase A
分子名称: Nucleoside Diphosphate Kinase A
著者Min, K, Song, H.K, Chang, C, Kim, S.Y, Lee, K.J, Suh, S.W.
登録日2001-09-10
公開日2002-04-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of human nucleoside diphosphate kinase A, a metastasis suppressor.
Proteins, 46, 2002
8GHZ
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BU of 8ghz by Molmil
Cryo-EM structure of fish immunogloblin M-Fc
分子名称: Teleost immunoglobulin M protein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Lyu, M, Stadtmueller, B.M, Malyutin, A.G.
登録日2023-03-13
公開日2023-11-08
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献The structure of the teleost Immunoglobulin M core provides insights on polymeric antibody evolution, assembly, and function.
Nat Commun, 14, 2023
5LEW
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BU of 5lew by Molmil
DNA polymerase
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA polymerase III subunit alpha, SULFATE ION, ...
著者Banos-Mateos, S, Lang, U.F, Maslen, S.L, Skehel, J.M, Lamers, M.H.
登録日2016-06-30
公開日2017-10-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献High-fidelity DNA replication in Mycobacterium tuberculosis relies on a trinuclear zinc center.
Nat Commun, 8, 2017
7ABH
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BU of 7abh by Molmil
Human pre-Bact-2 spliceosome (SF3b/U2 snRNP portion)
分子名称: Cell division cycle 5-like protein, DNA/RNA-binding protein KIN17, MINX M3 pre-mRNA, ...
著者Townsend, C, Kastner, B, Leelaram, M.N, Bertram, K, Stark, H, Luehrmann, R.
登録日2020-09-07
公開日2020-12-09
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Mechanism of protein-guided folding of the active site U2/U6 RNA during spliceosome activation.
Science, 370, 2020
3NGT
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BU of 3ngt by Molmil
Structure of Leishmania NDKb complexed with AMP.
分子名称: ADENOSINE MONOPHOSPHATE, Nucleoside diphosphate kinase
著者Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T.
登録日2010-06-13
公開日2011-04-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
3NGU
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BU of 3ngu by Molmil
Structure of Leishmania NDKb complexed with ADP.
分子名称: ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase
著者Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T.
登録日2010-06-13
公開日2011-04-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
3JS9
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BU of 3js9 by Molmil
Crystal structure of nucleoside diphosphate kinase family protein from Babesia bovis
分子名称: Nucleoside diphosphate kinase family protein, SULFATE ION
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2009-09-09
公開日2009-09-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of nucleoside diphosphate kinase family protein from Babesia bovis
To be Published
8QEW
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BU of 8qew by Molmil
Eosinophil Derived Neurotoxin/RNase 2 in complex with Tartrate
分子名称: L(+)-TARTARIC ACID, Non-secretory ribonuclease
著者Li, J, Kang, X, Prats-Ejarque, G, Boix, E.
登録日2023-09-01
公開日2024-09-11
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Eosinophil Derived Neurotoxin/RNase 2 in complex with Tartrate
To Be Published
4F36
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BU of 4f36 by Molmil
Crystal structure of Nucleoside diphosphate kinase B from Trypanosoma brucei, apo form
分子名称: Nucleoside diphosphate kinase, THIOCYANATE ION
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2012-05-08
公開日2012-05-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of Nucleoside diphosphate kinase B from Trypanosoma brucei, apo form
To be Published
3LZ0
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BU of 3lz0 by Molmil
Crystal Structure of Nucleosome Core Particle Composed of the Widom 601 DNA Sequence (orientation 1)
分子名称: CHLORIDE ION, DNA (145-MER), Histone H2A, ...
著者Vasudevan, D, Chua, E.Y.D, Davey, C.A.
登録日2010-03-01
公開日2010-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of nucleosome core particles containing the '601' strong positioning sequence
J.Mol.Biol., 403, 2010
3LZ1
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BU of 3lz1 by Molmil
Crystal Structure of Nucleosome Core Particle Composed of the Widom 601 DNA Sequence (orientation 2)
分子名称: CHLORIDE ION, DNA (145-MER), Histone H2A, ...
著者Vasudevan, D, Chua, E.Y.D, Davey, C.A.
登録日2010-03-01
公開日2010-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of nucleosome core particles containing the '601' strong positioning sequence
J.Mol.Biol., 403, 2010
7U51
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BU of 7u51 by Molmil
Nucleosome core particle with AP-site at SHL-6
分子名称: DNA (145-MER), Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, ...
著者Freudenthal, B.D, Weaver, T.M.
登録日2022-03-01
公開日2022-09-07
最終更新日2025-05-21
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for APE1 processing DNA damage in the nucleosome.
Nat Commun, 13, 2022
7U52
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BU of 7u52 by Molmil
nucleosome core particle with AP-site at SHL-6.5
分子名称: DNA (145-MER), Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, ...
著者Freudenthal, B.D, Weaver, T.M.
登録日2022-03-01
公開日2022-09-07
最終更新日2025-06-04
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for APE1 processing DNA damage in the nucleosome.
Nat Commun, 13, 2022
7U53
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BU of 7u53 by Molmil
Nucleosome core particle with AP-site at SHL0
分子名称: DNA (144-MER), Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, ...
著者Freudenthal, B.D, Weaver, T.M.
登録日2022-03-01
公開日2022-09-07
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis for APE1 processing DNA damage in the nucleosome.
Nat Commun, 13, 2022
3LEL
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BU of 3lel by Molmil
Structural Insight into the Sequence-Dependence of Nucleosome Positioning
分子名称: 147-MER DNA, Histone H2A, Histone H2B 1.1, ...
著者Wu, B, Vasudevan, D, Davey, C.A.
登録日2010-01-15
公開日2010-05-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural insight into the sequence dependence of nucleosome positioning
Structure, 18, 2010
3O62
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BU of 3o62 by Molmil
Nucleosome core particle modified with a cisplatin 1,3-cis-{Pt(NH3)2}2+-d(GpTpG) intrastrand cross-link
分子名称: Cisplatin, DNA (146-MER), Histone H2A type 1, ...
著者Lippard, S.J, Todd, R.C.
登録日2010-07-28
公開日2011-01-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.216 Å)
主引用文献Consequences of Cisplatin binding on nucleosome structure and dynamics.
Chem.Biol., 17, 2010
1DYT
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BU of 1dyt by Molmil
X-ray crystal structure of ECP (RNase 3) at 1.75 A
分子名称: CITRIC ACID, EOSINOPHIL CATIONIC PROTEIN, FE (III) ION
著者Mallorqui-Fernandez, G, Pous, J, Peracaula, R, Maeda, T, Tada, H, Yamada, H, Seno, M, De Llorens, R, Gomis-Rueth, F.X, Coll, M.
登録日2000-02-08
公開日2001-02-08
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Three-Dimensional Crystal Structure of Human Eosinophil Cationic Protein (Rnase 3) at 1.75 A Resolution.
J.Mol.Biol., 300, 2000
2C01
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BU of 2c01 by Molmil
Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A
分子名称: ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, NONSECRETORY RIBONUCLEASE
著者Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R.
登録日2005-08-24
公開日2006-01-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A.
Biochemistry, 45, 2006
2BZZ
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BU of 2bzz by Molmil
Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A
分子名称: ACETIC ACID, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, NONSECRETORY RIBONUCLEASE
著者Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R.
登録日2005-08-24
公開日2006-01-18
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A.
Biochemistry, 45, 2006
2C05
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BU of 2c05 by Molmil
Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A
分子名称: ACETIC ACID, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, NONSECRETORY RIBONUCLEASE
著者Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R.
登録日2005-08-25
公開日2006-01-18
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A.
Biochemistry, 45, 2006
2C02
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BU of 2c02 by Molmil
Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A
分子名称: ACETIC ACID, ADENOSINE-5'-DIPHOSPHATE, NONSECRETORY RIBONUCLEASE
著者Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R.
登録日2005-08-24
公開日2006-01-18
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A.
Biochemistry, 45, 2006

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件を2025-07-09に公開中

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