1JXV
 
 | | Crystal Structure of Human Nucleoside Diphosphate Kinase A | | 分子名称: | Nucleoside Diphosphate Kinase A | | 著者 | Min, K, Song, H.K, Chang, C, Kim, S.Y, Lee, K.J, Suh, S.W. | | 登録日 | 2001-09-10 | | 公開日 | 2002-04-10 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Crystal structure of human nucleoside diphosphate kinase A, a metastasis suppressor.
Proteins, 46, 2002
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7M7K
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2BEF
 | | CRYSTAL STRUCTURE OF NDP KINASE COMPLEXED WITH MG, ADP, AND BEF3 | | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ... | | 著者 | Xu, Y.W, Cherfils, J. | | 登録日 | 1998-05-26 | | 公開日 | 1998-08-12 | | 最終更新日 | 2024-10-16 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | AlF3 mimics the transition state of protein phosphorylation in the crystal structure of nucleoside diphosphate kinase and MgADP.
Proc.Natl.Acad.Sci.USA, 94, 1997
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3LEL
 | | Structural Insight into the Sequence-Dependence of Nucleosome Positioning | | 分子名称: | 147-MER DNA, Histone H2A, Histone H2B 1.1, ... | | 著者 | Wu, B, Vasudevan, D, Davey, C.A. | | 登録日 | 2010-01-15 | | 公開日 | 2010-05-19 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | | 主引用文献 | Structural insight into the sequence dependence of nucleosome positioning
Structure, 18, 2010
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3LZ0
 | | Crystal Structure of Nucleosome Core Particle Composed of the Widom 601 DNA Sequence (orientation 1) | | 分子名称: | CHLORIDE ION, DNA (145-MER), Histone H2A, ... | | 著者 | Vasudevan, D, Chua, E.Y.D, Davey, C.A. | | 登録日 | 2010-03-01 | | 公開日 | 2010-09-15 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Crystal structures of nucleosome core particles containing the '601' strong positioning sequence
J.Mol.Biol., 403, 2010
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3LZ1
 | | Crystal Structure of Nucleosome Core Particle Composed of the Widom 601 DNA Sequence (orientation 2) | | 分子名称: | CHLORIDE ION, DNA (145-MER), Histone H2A, ... | | 著者 | Vasudevan, D, Chua, E.Y.D, Davey, C.A. | | 登録日 | 2010-03-01 | | 公開日 | 2010-09-15 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Crystal structures of nucleosome core particles containing the '601' strong positioning sequence
J.Mol.Biol., 403, 2010
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8QEW
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6IQ4
 | | Nucleosome core particle cross-linked with a hetero-binuclear molecule possessing RAPTA and gold(I) 4-(diphenylphosphino)benzoic acid groups. | | 分子名称: | 4-diphenylphosphanylbenzoic acid, DNA (145-MER), GOLD ION, ... | | 著者 | DeFalco, L, Batchelor, L.K, Adhireksan, Z, Dyson, P.J, Davey, C.A. | | 登録日 | 2018-11-06 | | 公開日 | 2019-10-30 | | 最終更新日 | 2024-03-27 | | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | | 主引用文献 | Crosslinking Allosteric Sites on the Nucleosome.
Angew.Chem.Int.Ed.Engl., 58, 2019
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7K7G
 | | nucleosome and Gal4 complex | | 分子名称: | Centromere DNA-binding protein complex CBF3 subunit B, DNA (147-MER), Histone H2A.1, ... | | 著者 | Ruifang, G, Yawen, B. | | 登録日 | 2020-09-22 | | 公開日 | 2021-03-31 | | 最終更新日 | 2024-11-20 | | 実験手法 | ELECTRON MICROSCOPY (4.2 Å) | | 主引用文献 | Structural and dynamic mechanisms of CBF3-guided centromeric nucleosome formation.
Nat Commun, 12, 2021
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3NGT
 | | Structure of Leishmania NDKb complexed with AMP. | | 分子名称: | ADENOSINE MONOPHOSPHATE, Nucleoside diphosphate kinase | | 著者 | Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T. | | 登録日 | 2010-06-13 | | 公開日 | 2011-04-27 | | 最終更新日 | 2024-02-21 | | 実験手法 | X-RAY DIFFRACTION (2.57 Å) | | 主引用文献 | Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
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2BZZ
 | | Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A | | 分子名称: | ACETIC ACID, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, NONSECRETORY RIBONUCLEASE | | 著者 | Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R. | | 登録日 | 2005-08-24 | | 公開日 | 2006-01-18 | | 最終更新日 | 2024-11-13 | | 実験手法 | X-RAY DIFFRACTION (0.98 Å) | | 主引用文献 | Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A.
Biochemistry, 45, 2006
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2C02
 | | Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A | | 分子名称: | ACETIC ACID, ADENOSINE-5'-DIPHOSPHATE, NONSECRETORY RIBONUCLEASE | | 著者 | Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R. | | 登録日 | 2005-08-24 | | 公開日 | 2006-01-18 | | 最終更新日 | 2024-11-20 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A.
Biochemistry, 45, 2006
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2C05
 | | Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A | | 分子名称: | ACETIC ACID, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, NONSECRETORY RIBONUCLEASE | | 著者 | Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R. | | 登録日 | 2005-08-25 | | 公開日 | 2006-01-18 | | 最終更新日 | 2024-11-13 | | 実験手法 | X-RAY DIFFRACTION (1.86 Å) | | 主引用文献 | Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A.
Biochemistry, 45, 2006
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2C01
 | | Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A | | 分子名称: | ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, NONSECRETORY RIBONUCLEASE | | 著者 | Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R. | | 登録日 | 2005-08-24 | | 公開日 | 2006-01-18 | | 最終更新日 | 2024-10-16 | | 実験手法 | X-RAY DIFFRACTION (1.24 Å) | | 主引用文献 | Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A.
Biochemistry, 45, 2006
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7KBE
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7KBD
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9EAR
 | | CHD1-nucleosome complex (closed state) | | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromodomain-helicase-DNA-binding protein 1, ... | | 著者 | James, A.M, Farnung, L. | | 登録日 | 2024-11-11 | | 公開日 | 2025-05-07 | | 最終更新日 | 2025-05-28 | | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | | 主引用文献 | Structural basis of human CHD1 nucleosome recruitment and pausing.
Mol.Cell, 85, 2025
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2NZD
 | | Nucleosome core particle containing 145 bp of DNA | | 分子名称: | DNA (145-MER), Histone H2B, Histone H3, ... | | 著者 | Ong, M.S, Richmond, T.J, Davey, C.A. | | 登録日 | 2006-11-23 | | 公開日 | 2007-04-10 | | 最終更新日 | 2023-08-30 | | 実験手法 | X-RAY DIFFRACTION (2.65 Å) | | 主引用文献 | DNA stretching and extreme kinking in the nucleosome core
J.Mol.Biol., 368, 2007
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1OFC
 | | nucleosome recognition module of ISWI ATPase | | 分子名称: | 4-deoxy-alpha-D-glucopyranose, GLYCEROL, ISWI PROTEIN, ... | | 著者 | Grune, T, Muller, C.W. | | 登録日 | 2003-04-10 | | 公開日 | 2003-09-05 | | 最終更新日 | 2024-05-08 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Crystal Structure and Functional Analysis of a Nucleosome Recognition Module of the Remodeling Factor Iswi
Mol.Cell, 12, 2003
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8GHZ
 | | Cryo-EM structure of fish immunogloblin M-Fc | | 分子名称: | Teleost immunoglobulin M protein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | | 著者 | Lyu, M, Stadtmueller, B.M, Malyutin, A.G. | | 登録日 | 2023-03-13 | | 公開日 | 2023-11-08 | | 最終更新日 | 2024-11-13 | | 実験手法 | ELECTRON MICROSCOPY (2.78 Å) | | 主引用文献 | The structure of the teleost Immunoglobulin M core provides insights on polymeric antibody evolution, assembly, and function.
Nat Commun, 14, 2023
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1QKQ
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5LEW
 | | DNA polymerase | | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA polymerase III subunit alpha, SULFATE ION, ... | | 著者 | Banos-Mateos, S, Lang, U.F, Maslen, S.L, Skehel, J.M, Lamers, M.H. | | 登録日 | 2016-06-30 | | 公開日 | 2017-10-25 | | 最終更新日 | 2024-01-10 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | High-fidelity DNA replication in Mycobacterium tuberculosis relies on a trinuclear zinc center.
Nat Commun, 8, 2017
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2FHO
 | | NMR solution structure of the human spliceosomal protein complex p14-SF3b155 | | 分子名称: | spliceosomal protein SF3b155, spliceosomal protein p14 | | 著者 | Kuwasako, K, Dohmae, N, Inoue, M, Shirouzu, M, Guntert, P, Seraphin, B, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2005-12-26 | | 公開日 | 2006-12-26 | | 最終更新日 | 2024-05-29 | | 実験手法 | SOLUTION NMR | | 主引用文献 | NMR solution structure of the human spliceosomal protein complex p14-SF3b155
To be Published
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6AGY
 | | Aspergillus fumigatus Af293 NDK | | 分子名称: | Nucleoside diphosphate kinase | | 著者 | Hu, Y, Han, L. | | 登録日 | 2018-08-15 | | 公開日 | 2019-03-13 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Characterization of crystal structure and key residues of Aspergillus fumigatus nucleoside diphosphate kinase.
Biochem. Biophys. Res. Commun., 511, 2019
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4F36
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