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3G0T
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BU of 3g0t by Molmil
Crystal structure of putative aspartate aminotransferase (NP_905498.1) from Porphyromonas gingivalis W83 at 1.75 A resolution
分子名称: 1,2-ETHANEDIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CHLORIDE ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2009-01-28
公開日2009-02-10
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Molecular characterization of novel pyridoxal-5'-phosphate-dependent enzymes from the human microbiome.
Protein Sci., 23, 2014
4DCC
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BU of 4dcc by Molmil
Crystal structure of had family enzyme bt-2542 from bacteroides thetaiotaomicron (target efi-501088)
分子名称: CHLORIDE ION, Putative haloacid dehalogenase-like hydrolase, SODIUM ION, ...
著者Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Allen, K.N, Dunaway-Mariano, D, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2012-01-17
公開日2012-02-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal Structure of protein Bt-2542 from Bacteroides Thetaiotaomicron (Target Efi-501088)
To be Published
2VYX
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BU of 2vyx by Molmil
Crystal structure of the T. thermophilus dodecin W38F mutant
分子名称: CHLORIDE ION, COENZYME A, FLAVIN MONONUCLEOTIDE, ...
著者Essen, L.-O, Meissner, B.
登録日2008-07-29
公開日2009-11-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Ultrafast Charge Transfer Dynamics in Flavoprotein Dodecin
To be Published
5K8B
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BU of 5k8b by Molmil
X-ray structure of KdnA, 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase, from Shewanella oneidensis in the presence of the external aldimine with PLP and glutamate
分子名称: 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase, CHLORIDE ION, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-GLUTAMIC ACID, ...
著者Holden, H.M, Thoden, J.B, Zachman-Brockmeyer, T.R.
登録日2016-05-28
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structures of KdnB and KdnA from Shewanella oneidensis: Key Enzymes in the Formation of 8-Amino-3,8-Dideoxy-d-Manno-Octulosonic Acid.
Biochemistry, 55, 2016
3DIG
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BU of 3dig by Molmil
CRYSTAL STRUCTURE OF THE THERMOTOGA MARITIMA LYSINE RIBOSWITCH BOUND TO S-(2-aminoethyl)-L-cysteine
分子名称: ISOPROPYL ALCOHOL, L-THIALYSINE, POTASSIUM ION, ...
著者Serganov, A.A.
登録日2008-06-20
公開日2008-09-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into amino acid binding and gene control by a lysine riboswitch.
Nature, 455, 2008
4DQ9
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BU of 4dq9 by Molmil
Crystal structure of the minor pseudopilin EPSH from the type II secretion system of Vibrio cholerae
分子名称: CHLORIDE ION, General secretion pathway protein H, SODIUM ION
著者Raghunathan, K, Vago, F.S, Grindem, D, Ball, T, Wedemeyer, W.J, Arvidson, D.N.
登録日2012-02-15
公開日2013-03-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献The 1.59 angstrom resolution structure of the minor pseudopilin EpsH of Vibrio cholerae reveals a long flexible loop.
Biochim.Biophys.Acta, 1844, 2013
5JV4
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BU of 5jv4 by Molmil
Structure of F420 binding protein, MSMEG_6526, from Mycobacterium smegmatis with F420 bound
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, COENZYME F420, ...
著者Lee, B.M, Carr, P.D, Jackson, C.J.
登録日2016-05-10
公開日2017-08-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of F420 binding protein, MSMEG_6526, from Mycobacterium smegmatis with F420 bound
To Be Published
5JYI
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BU of 5jyi by Molmil
Trypsin bound with succinic acid at 1.9A
分子名称: CALCIUM ION, Cationic trypsin, SODIUM ION, ...
著者Manohar, R, Kutumbarao, N.H.V, KarthiK, L, Malathy, P, Velmurugan, D, Gunasekaran, K.
登録日2016-05-14
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.914 Å)
主引用文献Trypsin bound with succinic acid at 1.9A
To Be Published
5K2B
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BU of 5k2b by Molmil
2.5 angstrom A2a adenosine receptor structure with MR phasing using XFEL data
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, ...
著者Batyuk, A, Galli, L, Ishchenko, A, Han, G.W, Gati, C, Popov, P, Lee, M.-Y, Stauch, B, White, T.A, Barty, A, Aquila, A, Hunter, M.S, Liang, M, Boutet, S, Pu, M, Liu, Z.-J, Nelson, G, James, D, Li, C, Zhao, Y, Spence, J.C.H, Liu, W, Fromme, P, Katritch, V, Weierstall, U, Stevens, R.C, Cherezov, V, GPCR Network (GPCR)
登録日2016-05-18
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Native phasing of x-ray free-electron laser data for a G protein-coupled receptor.
Sci Adv, 2, 2016
2V79
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BU of 2v79 by Molmil
Crystal Structure of the N-terminal domain of DnaD from Bacillus Subtilis
分子名称: CHLORIDE ION, DNA REPLICATION PROTEIN DNAD, SODIUM ION
著者Schneider, S, Zhang, W, Soultanas, P, Paoli, M.
登録日2007-07-27
公開日2008-01-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the N-Terminal Oligomerization Domain of Dnad Reveals a Unique Tetramerization Motif and Provides Insights Into Scaffold Formation.
J.Mol.Biol., 376, 2008
1Q93
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BU of 1q93 by Molmil
Crystal structure of a mutant of the sarcin/ricin domain from rat 28S rRNA
分子名称: SODIUM ION, SULFATE ION, Sarcin/Ricin 28S rRNA
著者Correll, C.C, Beneken, J, Plantinga, M.J, Lubbers, M, Chan, Y.L.
登録日2003-08-22
公開日2003-11-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The common and distinctive features of the bulged-G motif based on a 1.04 A resolution RNA structure
Nucleic Acids Res., 31, 2003
1QRV
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BU of 1qrv by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF HMG-D AND DNA
分子名称: DNA (5'-D(*GP*CP*GP*AP*TP*AP*TP*CP*GP*C)-3'), HIGH MOBILITY GROUP PROTEIN D, SODIUM ION
著者Murphy IV, F.V, Sweet, R.M, Churchill, M.E.A.
登録日1999-06-15
公開日1999-12-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The structure of a chromosomal high mobility group protein-DNA complex reveals sequence-neutral mechanisms important for non-sequence-specific DNA recognition.
EMBO J., 18, 1999
1OUB
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BU of 1oub by Molmil
CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: X-RAY STRUCTURE OF THE V100A MUTANT
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Fujii, S, Yutani, K.
登録日1996-08-23
公開日1997-02-12
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of the hydrophobic effect to the stability of human lysozyme: calorimetric studies and X-ray structural analyses of the nine valine to alanine mutants.
Biochemistry, 36, 1997
1OUH
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BU of 1ouh by Molmil
CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: X-RAY STRUCTURE OF THE V74A MUTANT
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Fujii, S, Yutani, K.
登録日1996-08-23
公開日1997-02-12
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of the hydrophobic effect to the stability of human lysozyme: calorimetric studies and X-ray structural analyses of the nine valine to alanine mutants.
Biochemistry, 36, 1997
1OUF
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BU of 1ouf by Molmil
CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: X-RAY STRUCTURE OF THE V130A MUTANT
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Fujii, S, Yutani, K.
登録日1996-08-23
公開日1997-02-12
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of the hydrophobic effect to the stability of human lysozyme: calorimetric studies and X-ray structural analyses of the nine valine to alanine mutants.
Biochemistry, 36, 1997
2Q1H
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BU of 2q1h by Molmil
Ancestral Corticoid Receptor in Complex with Aldosterone
分子名称: ALDOSTERONE, AncCR, GLYCEROL, ...
著者Ortlund, E.A, Bridgham, J.T, Redinbo, M.R, Thornton, J.W.
登録日2007-05-24
公開日2007-09-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of an ancient protein: evolution by conformational epistasis.
Science, 317, 2007
2WRX
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BU of 2wrx by Molmil
Semi-synthetic analogue of human insulin NMeAlaB26-insulin at pH 3.0
分子名称: INSULIN A CHAIN, INSULIN B CHAIN, SODIUM ION
著者Brzozowski, A.M, Jiracek, J, Zakova, L, Antolikova, E, Watson, C.J, Turkenburg, J.P, Dodson, G.G.
登録日2009-09-02
公開日2010-02-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Implications for the Active Form of Human Insulin Based on the Structural Convergence of Highly Active Hormone Analogues.
Proc.Natl.Acad.Sci.USA, 107, 2010
1ORP
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BU of 1orp by Molmil
Structure of a Trapped Endonuclease III-DNA Covalent Intermediate: Estranged-Adenine Complex
分子名称: 5'-D(*AP*AP*GP*AP*CP*AP*TP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*AP*(PED)P*GP*TP*CP*T)-3', Endonuclease III, ...
著者Fromme, J.C, Verdine, G.L.
登録日2003-03-14
公開日2003-07-15
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a Trapped Endonuclease III-DNA Covalent Intermediate
Embo J., 22, 2003
2WXY
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BU of 2wxy by Molmil
Crystal structure of mouse angiotensinogen in the reduced form
分子名称: 1,2-ETHANEDIOL, ANGIOTENSINOGEN, SODIUM ION
著者Zhou, A, Wei, Z, Carrell, R.W, Read, R.J.
登録日2009-11-11
公開日2010-10-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Redox Switch in Angiotensinogen Modulates Angiotensin Release.
Nature, 468, 2010
4EOH
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BU of 4eoh by Molmil
Crystal Structure of Human PL Kinase with bound Theophylline
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Pyridoxal Kinase, SODIUM ION, ...
著者Safo, M.K, Gandhi, A.K, Musayev, F.N.
登録日2012-04-14
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of human pyridoxal kinase in complex with the neurotoxins, ginkgotoxin and theophylline: insights into pyridoxal kinase inhibition.
Plos One, 7, 2012
2ZO5
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BU of 2zo5 by Molmil
Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in a complex with azide
分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AZIDE ION, ...
著者Polyakov, K.M, Boyko, K.M, Slutsky, A, Tikhonova, T.V, Antipov, A.N, Zvyagilskaya, R.A, Popov, A.N, Lamzin, V.S, Bourenkov, G.P, Popov, V.O.
登録日2008-05-05
公開日2009-05-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献High-resolution structural analysis of a novel octaheme cytochrome c nitrite reductase from the haloalkaliphilic bacterium Thioalkalivibrio nitratireducens
J.Mol.Biol., 389, 2009
2P7I
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BU of 2p7i by Molmil
CRYSTAL STRUCTURE OF a SAM dependent methyl-transferase type 12 family protein (ECA1738) FROM PECTOBACTERIUM ATROSEPTICUM SCRI1043 AT 1.74 A RESOLUTION
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2007-03-20
公開日2007-04-03
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal structure of hypothetical protein (YP_049838.1) from Erwinia carotovora atroseptica SCRI1043 at 1.74 A resolution
To be published
4BEK
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BU of 4bek by Molmil
CRYSTAL STRUCTURE OF BACE-1 IN COMPLEX WITH CHEMICAL LIGAND
分子名称: (4S)-4-(4-methoxyphenyl)-4-methyl-5,6-dihydro-1,3-thiazin-2-amine, BETA-SECRETASE 1, DIMETHYL SULFOXIDE, ...
著者Banner, D.W, Benz, J, Stihle, M.
登録日2013-03-11
公開日2013-06-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Bace1 Inhibitors: A Head Group Scan on a Series of Amides.
Bioorg.Med.Chem.Lett., 23, 2013
2WS3
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Crystal structure of the E. coli succinate:quinone oxidoreductase (SQR) SdhD Tyr83Phe mutant
分子名称: 2-METHYL-N-PHENYL-5,6-DIHYDRO-1,4-OXATHIINE-3-CARBOXAMIDE, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
著者Ruprecht, J, Yankovskaya, V, Maklashina, E, Iwata, S, Cecchini, G.
登録日2009-09-03
公開日2010-08-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Succinate Dehydrogenase Activity
To be Published
4BFD
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BU of 4bfd by Molmil
CRYSTAL STRUCTURE OF BACE-1 IN COMPLEX WITH CHEMICAL LIGAND
分子名称: BETA-SECRETASE 1, DIMETHYL SULFOXIDE, N-[3-[(1S,3S,6S)-5-azanyl-3-methyl-4-azabicyclo[4.1.0]hept-4-en-3-yl]-4-fluoranyl-phenyl]-5-chloranyl-pyridine-2-carbox amide, ...
著者Banner, D.W, Benz, J, Stihle, M.
登録日2013-03-18
公開日2013-06-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Bace1 Inhibitors: A Head Group Scan on a Series of Amides.
Bioorg.Med.Chem.Lett., 23, 2013

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