PDB: 2869 件ウェブページステータス検索Chemie searchBIRD

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3NSG	Crystal Structure of OmpF, an Outer Membrane Protein from Salmonella typhi 分子名称: CITRATE ANION, GLYCEROL, L(+)-TARTARIC ACID, ... 著者 Balasubramaniam, D, Arockiasamy, A, Sharma, A, Krishnaswamy, S. 登録日 2010-07-01 公開日 2011-07-13 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Asymmetric pore occupancy in crystal structure of OmpF porin from Salmonella typhi J.Struct.Biol., 178, 2012
1M5Q	Crystal structure of a novel Sm-like archaeal protein from Pyrobaculum aerophilum 分子名称: ACETIC ACID, CADMIUM ION, GLYCEROL, ... 著者 Mura, C, Phillips, M, Kozhukhovsky, A, Eisenberg, D. 登録日 2002-07-09 公開日 2003-03-18 最終更新日 2017-05-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure and assembly of an augmented Sm-like archaeal protein 14-mer Proc.Natl.Acad.Sci.USA, 100, 2003
3PNW	Crystal Structure of the tudor domain of human TDRD3 in complex with an anti-TDRD3 FAB 分子名称: FAB heavy chain, FAB light chain, Tudor domain-containing protein 3, ... 著者 Loppnau, P, Tempel, W, Wernimont, A.K, Lam, R, Ravichandran, M, Adams-Cioaba, M.A, Persson, H, Sidhu, S.S, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Cossar, D, Structural Genomics Consortium (SGC) 登録日 2010-11-19 公開日 2010-12-01 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 CDR-H3 Diversity Is Not Required for Antigen Recognition by Synthetic Antibodies. J.Mol.Biol., 425, 2013
1KC8	Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit 分子名称: 23S RRNA, 5S RRNA, BLASTICIDIN S, ... 著者 Hansen, J.L, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A. 登録日 2001-11-07 公開日 2003-07-22 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit J.Mol.Biol., 330, 2003
1KD1	Co-crystal Structure of Spiramycin bound to the 50S Ribosomal Subunit of Haloarcula marismortui 分子名称: 23S RRNA, 5S RRNA, CADMIUM ION, ... 著者 Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A. 登録日 2001-11-12 公開日 2002-07-19 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The structures of four macrolide antibiotics bound to the large ribosomal subunit. Mol.Cell, 10, 2002
3PCQ	Femtosecond X-ray protein Nanocrystallography 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ... 著者 Chapman, H.N, Fromme, P, Barty, A, White, T.A, Kirian, R.A, Aquila, A, Hunter, M.S, Schulz, J, Deponte, D.P, Weierstall, U, Doak, R.B, Maia, F.R.N.C, Martin, A.V, Schlichting, I, Lomb, L, Coppola, N, Shoeman, R.L, Epp, S.W, Hartmann, R, Rolles, D, Rudenko, A, Foucar, L, Kimmel, N, Weidenspointner, G, Holl, P, Liang, M, Barthelmess, M, Caleman, C, Boutet, S, Bogan, M.J, Krzywinski, J, Bostedt, C, Bajt, S, Gumprecht, L, Rudek, B, Erk, B, Schmidt, C, Homke, A, Reich, C, Pietschner, D, Struder, L, Hauser, G, Gorke, H, Ullrich, J, Herrmann, S, Schaller, G, Schopper, F, Soltau, H, Kuhnel, K.-U, Messerschmidt, M, Bozek, J.D, Hau-Riege, S.P, Frank, M, Hampton, C.Y, Sierra, R, Starodub, D, Williams, G.J, Hajdu, J, Timneanu, N, Seibert, M.M, Andreasson, J, Rocker, A, Jonsson, O, Svenda, M, Stern, S, Nass, K, Andritschke, R, Schroter, C.-D, Krasniqi, F, Bott, M, Schmidt, K.E, Wang, X, Grotjohann, I, Holton, J.M, Barends, T.R.M, Neutze, R, Marchesini, S, Fromme, R, Schorb, S, Rupp, D, Adolph, M, Gorkhover, T, Andersson, I, Hirsemann, H, Potdevin, G, Graafsma, H, Nilsson, B, Spence, J.C.H. 登録日 2010-10-21 公開日 2011-02-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (8.984 Å) 主引用文献 Femtosecond X-ray protein nanocrystallography. Nature, 470, 2011
1N8R	Structure of large ribosomal subunit in complex with virginiamycin M 分子名称: 23S ribosomal RNA, 50S ribosomal protein L10e, 50S ribosomal protein L13P, ... 著者 Hansen, J.L, Moore, P.B, Steitz, T.A. 登録日 2002-11-21 公開日 2003-07-22 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit J.Mol.Biol., 330, 2003
3PIP	Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit 分子名称: 50S ribosomal protein L11, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Belousoff, M.J, Shapira, T, Bashan, A, Zimmerman, E, Kinashi, H, Rozenberg, H, Yonath, A. 登録日 2010-11-07 公開日 2011-02-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 Crystal structure of the synergistic antibiotic pair, lankamycin and lankacidin, in complex with the large ribosomal subunit. Proc.Natl.Acad.Sci.USA, 108, 2011
3POX	Crystal Structure of E.coli OmpF porin in lipidic cubic phase: space group P1 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, OmpF protein, POTASSIUM ION, ... 著者 Efremov, R.G, Sazanov, L.A. 登録日 2010-11-23 公開日 2012-03-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of Escherichia coli OmpF porin from lipidic mesophase. J.Struct.Biol., 178, 2012
3PIO	Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit 分子名称: 50S ribosomal protein L11, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Belousoff, M.J, Shapira, T, Bashan, A, Zimmerman, E, Arakawa, K, Kinashi, H, Rozenberg, H, Yonath, A. 登録日 2010-11-07 公開日 2011-02-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.2473 Å) 主引用文献 Crystal structure of the synergistic antibiotic pair, lankamycin and lankacidin, in complex with the large ribosomal subunit. Proc.Natl.Acad.Sci.USA, 108, 2011
3O79	Crystal Structure of Wild-type Rabbit PrP 126-230 分子名称: CHLORIDE ION, GLYCEROL, Rabbit PrP, ... 著者 Sweeting, B, Chakrabartty, A, Pai, E.F. 登録日 2010-07-30 公開日 2010-11-24 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Prion disease susceptibility is affected by beta-structure folding propensity and local side-chain interactions in PrP. Proc.Natl.Acad.Sci.USA, 107, 2010
1M6V	Crystal Structure of the G359F (small subunit) Point Mutant of Carbamoyl Phosphate Synthetase 分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, L-ornithine, ... 著者 Thoden, J.B, Huang, X, Raushel, F.M, Holden, H.M. 登録日 2002-07-17 公開日 2002-07-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Carbamoyl-phosphate synthetase. Creation of an escape route for ammonia J.Biol.Chem., 277, 2002
1NJI	Structure of chloramphenicol bound to the 50S ribosomal subunit 分子名称: 23S ribosomal RNA, 50S ribosomal protein L10e, 50S ribosomal protein L13P, ... 著者 Hansen, J.L, Moore, P.B, Steitz, T.A. 登録日 2002-12-31 公開日 2003-07-22 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit J.Mol.Biol., 330, 2003
1M90	Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit 分子名称: 23S RRNA, 5S RRNA, 6-AMINOHEXANOIC ACID, ... 著者 Hansen, J.L, Schmeing, T.M, Moore, P.B, Steitz, T.A. 登録日 2002-07-26 公開日 2002-09-06 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural insights into peptide bond formation. Proc.Natl.Acad.Sci.USA, 99, 2002
3OTO	Crystal Structure of the 30S ribosomal subunit from a KsgA mutant of Thermus thermophilus (HB8) 分子名称: 16S rRNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ... 著者 Demirci, H, Murphy IV, F, Belardinelli, R, Kelley, A.C, Ramakrishnan, V, Gregory, S.T, Dahlberg, A.E, Jogl, G. 登録日 2010-09-13 公開日 2010-09-29 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.69 Å) 主引用文献 Modification of 16S ribosomal RNA by the KsgA methyltransferase restructures the 30S subunit to optimize ribosome function. Rna, 16, 2010
1N32	Structure of the Thermus thermophilus 30S ribosomal subunit bound to codon and near-cognate transfer RNA anticodon stem-loop mismatched at the first codon position at the a site with paromomycin 分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ... 著者 Ogle, J.M, Murphy IV, F.V, Tarry, M.J, Ramakrishnan, V. 登録日 2002-10-25 公開日 2002-11-29 最終更新日 2019-11-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Selection of tRNA by the Ribosome Requires a Transition from an Open to a Closed Form Cell(Cambridge,Mass.), 111, 2002
3QQM	Crystal structure of a Putative amino-acid aminotransferase (NP_104211.1) from Mesorhizobium loti at 2.30 A resolution 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2011-02-15 公開日 2011-03-02 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of a Putative amino-acid aminotransferase (NP_104211.1) from Mesorhizobium loti at 2.30 A resolution To be published
3Q9B	Crystal Structure of APAH complexed with M344 分子名称: 4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide, Acetylpolyamine amidohydrolase, DIMETHYL SULFOXIDE, ... 著者 Lombardi, P.M, Christianson, D.W. 登録日 2011-01-07 公開日 2011-03-02 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structure of prokaryotic polyamine deacetylase reveals evolutionary functional relationships with eukaryotic histone deacetylases . Biochemistry, 50, 2011
3Q08	Crystal Structure of Chlorite Dismutase from D. Aromatica at pH 6.5 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Chlorite dismutase, ... 著者 Goblirsch, B.R, Wilmot, C.M. 登録日 2010-12-15 公開日 2011-01-05 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Structural features promoting dioxygen production by Dechloromonas aromatica chlorite dismutase. J.Biol.Inorg.Chem., 15, 2010
1M1K	Co-crystal structure of azithromycin bound to the 50S ribosomal subunit of Haloarcula marismortui 分子名称: 23S RRNA, 5S RRNA, AZITHROMYCIN, ... 著者 Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A. 登録日 2002-06-19 公開日 2002-07-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 The structures of four macrolide antibiotics bound to the large ribosomal subunit. Mol.Cell, 10, 2002
3RGD	Iron loaded frog M ferritin. Short soaking time 分子名称: FE (III) ION, Ferritin, middle subunit 著者 Bertini, I, Lalli, D, Mangani, S, Pozzi, C, Rosa, C, Theil, E.C, Turano, P. 登録日 2011-04-08 公開日 2012-04-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 Structural insights into the ferroxidase site of ferritins from higher eukaryotes. J.Am.Chem.Soc., 134, 2012
1KQS	The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein Synthesis 分子名称: 23S RRNA, 5S RRNA, 6-AMINOHEXANOIC ACID, ... 著者 Schmeing, T.M, Seila, A.C, Hansen, J.L, Freeborn, B, Soukup, J.K, Scaringe, S.A, Strobel, S.A, Moore, P.B, Steitz, T.A. 登録日 2002-01-07 公開日 2002-02-22 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 A pre-translocational intermediate in protein synthesis observed in crystals of enzymatically active 50S subunits. Nat.Struct.Biol., 9, 2002
3OW2	Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit 分子名称: (2R,3S,4R,5R,8R,10R,11R,12S,13S,14R)-2-ethyl-3,4,10-trihydroxy-3,5,6,8,10,12,14-heptamethyl-15-oxo-11-[(3,4,6-trideoxy-3-{[3-(1-{(1S,2R)-1-(fluoromethyl)-2-hydroxy-2-[4-(methylsulfonyl)phenyl]ethyl}-1H-1,2,3-triazol-4-yl)propyl](methyl)amino}-beta-D-xylo-hexopyranosyl)oxy]-1-oxa-6-azacyclopentadecan-13-yl 2,6-dideoxy-3-C-methyl-3-O-methyl-alpha-L-ribo-hexopyranoside, 23S RIBOSOMAL RNA, 50S ribosomal protein L10E, ... 著者 Kanyo, Z.F. 登録日 2010-09-17 公開日 2012-06-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献
1K9M	Co-crystal structure of tylosin bound to the 50S ribosomal subunit of Haloarcula marismortui 分子名称: 23S RRNA, 5S RRNA, CADMIUM ION, ... 著者 Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A. 登録日 2001-10-29 公開日 2002-07-19 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The structures of four macrolide antibiotics bound to the large ribosomal subunit. Mol.Cell, 10, 2002
1N33	Structure of the Thermus thermophilus 30S ribosomal subunit bound to codon and near-cognate transfer rna anticodon stem-loop mismatched at the second codon position at the a site with paromomycin 分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ... 著者 Ogle, J.M, Murphy IV, F.V, Tarry, M.J, Ramakrishnan, V. 登録日 2002-10-25 公開日 2002-11-29 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Selection of tRNA by the Ribosome Requires a Transition from an Open to a Closed Form Cell(Cambridge,Mass.), 111, 2002

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