PDB: 659 件ウェブページステータス検索Chemie searchBIRD

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2D8I	Solution structure of the PDZ domain of T-cell lymphoma invasion and metastasis 1 varian 分子名称: T-cell lymphoma invasion and metastasis 1 variant 著者 Qin, X.R, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-12-06 公開日 2006-06-06 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the PDZ domain of T-cell lymphoma invasion and metastasis 1 varian TO BE PUBLISHED
2D90	Solution structure of the third PDZ domain of PDZ domain containing protein 1 分子名称: PDZ domain containing protein 1 著者 Qin, X.R, Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-12-08 公開日 2006-12-08 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the third PDZ domain of PDZ domain containing protein 1 To be published
2I0L	X-ray crystal structure of Sap97 PDZ2 bound to the C-terminal peptide of HPV18 E6. 分子名称: Disks large homolog 1, peptide E6 著者 Chen, X.S, Zhang, Y, Dasgupta, J, Banks, L, Thomas, M. 登録日 2006-08-10 公開日 2007-02-20 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Structures of a Human Papillomavirus (HPV) E6 Polypeptide Bound to MAGUK Proteins: Mechanisms of Targeting Tumor Suppressors by a High-Risk HPV Oncoprotein. J.Virol., 81, 2007
2I04	X-ray crystal structure of MAGI-1 PDZ1 bound to the C-terminal peptide of HPV18 E6 分子名称: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1, SULFATE ION, ... 著者 Chen, X.S, Zhang, Y, Dasgupta, J, Banks, L, Thomas, M. 登録日 2006-08-09 公開日 2007-02-20 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structures of a Human Papillomavirus (HPV) E6 Polypeptide Bound to MAGUK Proteins: Mechanisms of Targeting Tumor Suppressors by a High-Risk HPV Oncoprotein. J.Virol., 81, 2007
6IQR	Crystal structure of Prc with S452I and L252Y mutations 分子名称: Tail-specific protease 著者 Chueh, C.K, Chang, C.I. 登録日 2018-11-08 公開日 2019-07-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.42 Å) 主引用文献 Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases. Mbio, 10, 2019
6IQS	Crystal structure of Prc with L245A and L340G mutations in complex with NlpI 分子名称: Lipoprotein NlpI, Tail-specific protease 著者 Chuech, C.K, Chang, C.I. 登録日 2018-11-08 公開日 2019-07-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases. Mbio, 10, 2019
6JJL	Crystal structure of the DegP dodecamer with a modulator 分子名称: CYS-TYR-ARG-LYS-LEU, Periplasmic serine endoprotease DegP 著者 Cho, H, Choi, Y, Lee, H.H, Kim, S. 登録日 2019-02-26 公開日 2020-09-02 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy. Commun Biol, 3, 2020
7M4R	Structural basis for SARS-CoV-2 envelope protein in recognition of human cell junction protein PALS1 分子名称: Envelope small membrane protein, MAGUK p55 subfamily member 5 著者 Liu, Q, Chai, J. 登録日 2021-03-22 公開日 2021-03-31 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.65 Å) 主引用文献 Structural basis for SARS-CoV-2 envelope protein recognition of human cell junction protein PALS1. Nat Commun, 12, 2021
7YKF	Crystal structure of MAGI2 PDZ0-GK/pEphexin4 complex 分子名称: Ephexin4, Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 著者 Zhang, M, Lin, L, Zhu, J. 登録日 2022-07-22 公開日 2023-08-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Phosphorylation-dependent recognition of diverse protein targets by the cryptic GK domain of MAGI MAGUKs. Sci Adv, 9, 2023
7YKI	Crystal structure of MAGI2 PDZ0-GK domain in complex with phospho-SAPAP1 GBR3 peptide 分子名称: GLYCEROL, Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2, ... 著者 Zhang, M, Lin, L, Zhu, J. 登録日 2022-07-22 公開日 2023-08-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Phosphorylation-dependent recognition of diverse protein targets by the cryptic GK domain of MAGI MAGUKs. Sci Adv, 9, 2023
7YKG	Crystal structure of MAGI2 PDZ0-GK/pSGEF complex 分子名称: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2, SGEF 著者 Zhang, M, Lin, L, Zhu, J. 登録日 2022-07-22 公開日 2023-08-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 Phosphorylation-dependent recognition of diverse protein targets by the cryptic GK domain of MAGI MAGUKs. Sci Adv, 9, 2023
7YKH	Crystal structure of MAGI2 PDZ0-GK domain in complex with phospho-SAPAP1 GBR2 peptide 分子名称: GLYCEROL, Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2, ... 著者 Zhang, M, Lin, L, Zhu, J. 登録日 2022-07-22 公開日 2023-08-16 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Phosphorylation-dependent recognition of diverse protein targets by the cryptic GK domain of MAGI MAGUKs. Sci Adv, 9, 2023
4WSI	Crystal Structure of PALS1/Crb complex 分子名称: MAGUK p55 subfamily member 5, Protein crumbs 著者 Wei, Z, Li, Y, Zhang, M. 登録日 2014-10-28 公開日 2014-11-26 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Structure of Crumbs tail in complex with the PALS1 PDZ-SH3-GK tandem reveals a highly specific assembly mechanism for the apical Crumbs complex. Proc.Natl.Acad.Sci.USA, 111, 2014
7W6X	Crystal structure of E. coli RseP in complex with batimastat 分子名称: 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE, Regulator of sigma-E protease RseP, ZINC ION 著者 Takanuki, K, Imaizumi, Y, Nogi, T. 登録日 2021-12-02 公開日 2022-09-07 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP. Sci Adv, 8, 2022
4A9G	Symmetrized cryo-EM reconstruction of E. coli DegQ 24-mer in complex with beta-casein 分子名称: PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ 著者 Malet, H, Canellas, F, Sawa, J, Yan, J, Thalassinos, K, Ehrmann, M, Clausen, T, Saibil, H.R. 登録日 2011-11-26 公開日 2012-01-11 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (7.5 Å) 主引用文献 Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq Nat.Struct.Mol.Biol., 19, 2012
4A8C	Symmetrized cryo-EM reconstruction of E. coli DegQ 12-mer in complex with a binding peptide 分子名称: PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ 著者 Malet, H, Canellas, F, Sawa, J, Yan, J, Thalassinos, K, Ehrmann, M, Clausen, T, Saibil, H.R. 登録日 2011-11-20 公開日 2012-01-11 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (7.5 Å) 主引用文献 Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq Nat.Struct.Mol.Biol., 19, 2012
6IQQ	Crystal structure of Prc with S452I and L252Y mutations in complex with NlpI 分子名称: CALCIUM ION, Lipoprotein NlpI, Tail-specific protease 著者 Chueh, C.K, Chang, C.I. 登録日 2018-11-08 公開日 2019-07-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases. Mbio, 10, 2019
6IRD	Complex structure of INADL PDZ89 and PLCb4 C-terminal CC-PBM 分子名称: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase, GOLD ION, InaD-like protein 著者 Ye, F, Li, J, Huang, Y, Liu, W, Zhang, M. 登録日 2018-11-12 公開日 2019-01-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.813 Å) 主引用文献 An unexpected INAD PDZ tandem-mediated plc beta binding in Drosophila photo receptors. Elife, 7, 2018
6IRE	Complex structure of INAD PDZ45 and NORPA CC-PBM 分子名称: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase, Inactivation-no-after-potential D protein 著者 Ye, F, Li, J, Deng, X, Liu, W, Zhang, M. 登録日 2018-11-12 公開日 2019-01-23 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 An unexpected INAD PDZ tandem-mediated plc beta binding in Drosophila photo receptors. Elife, 7, 2018
6JJK	Crystal structure of the DegP dodecamer with a modulator 分子名称: CYS-TYR-TYR-LYS-ILE, Periplasmic serine endoprotease DegP 著者 Cho, H, Choi, Y, Lee, H.H, Kim, S. 登録日 2019-02-26 公開日 2020-09-02 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy Commun Biol, 3, 2020
6JJO	Crystal structure of the DegP dodecamer with a modulator 分子名称: Periplasmic serine endoprotease DegP, TMB-CYRKL modulator 著者 Cho, H, Choi, Y, Lee, H.H, Kim, S. 登録日 2019-02-26 公開日 2020-09-02 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (4.157 Å) 主引用文献 Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy Commun Biol, 3, 2020
5WQL	Structure of a PDZ-protease bound to a substrate-binding adaptor 分子名称: ALA-ALA-ALA-ALA, ALA-ALA-ALA-ALA-ALA-ALA, LEU-SER-ARG-SER, ... 著者 Su, M.Y, Chang, C.I. 登録日 2016-11-27 公開日 2017-11-22 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of adaptor-mediated protein degradation by the tail-specific PDZ-protease Prc Nat Commun, 8, 2017
5V6T	The Plexin D1 intracellular region in complex with GIPC1 分子名称: PDZ domain-containing protein GIPC1, Plexin-D1, SULFATE ION 著者 Shang, G, Zhang, X. 登録日 2017-03-17 公開日 2017-05-31 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.189 Å) 主引用文献 Structure analyses reveal a regulated oligomerization mechanism of the PlexinD1/GIPC/myosin VI complex. Elife, 6, 2017
3STJ	Crystal structure of the protease + PDZ1 domain of DegQ from Escherichia coli 分子名称: Protease degQ, peptide (UNK) 著者 Sawa, J, Malet, H, Krojer, T, Canellas, F, Ehrmann, M, Clausen, T. 登録日 2011-07-11 公開日 2011-07-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Molecular adaptation of the DegQ protease to exert protein quality control in the bacterial cell envelope. J.Biol.Chem., 286, 2011
3SHW	Crystal structure of ZO-1 PDZ3-SH3-Guk supramodule complex with Connexin-45 peptide 分子名称: Gap junction gamma-1 protein, Tight junction protein ZO-1 著者 Yu, J, Pan, L, Chen, J, Yu, H, Zhang, M. 登録日 2011-06-17 公開日 2011-09-28 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The Structure of the PDZ3-SH3-GuK Tandem of ZO-1 Suggests a Supramodular Organization of the Conserved MAGUK Family Scaffold Core To be Published

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