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2D8I
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Solution structure of the PDZ domain of T-cell lymphoma invasion and metastasis 1 varian
分子名称: T-cell lymphoma invasion and metastasis 1 variant
著者Qin, X.R, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-06
公開日2006-06-06
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the PDZ domain of T-cell lymphoma invasion and metastasis 1 varian
TO BE PUBLISHED
2D90
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BU of 2d90 by Molmil
Solution structure of the third PDZ domain of PDZ domain containing protein 1
分子名称: PDZ domain containing protein 1
著者Qin, X.R, Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-08
公開日2006-12-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the third PDZ domain of PDZ domain containing protein 1
To be published
2I0L
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BU of 2i0l by Molmil
X-ray crystal structure of Sap97 PDZ2 bound to the C-terminal peptide of HPV18 E6.
分子名称: Disks large homolog 1, peptide E6
著者Chen, X.S, Zhang, Y, Dasgupta, J, Banks, L, Thomas, M.
登録日2006-08-10
公開日2007-02-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structures of a Human Papillomavirus (HPV) E6 Polypeptide Bound to MAGUK Proteins: Mechanisms of Targeting Tumor Suppressors by a High-Risk HPV Oncoprotein.
J.Virol., 81, 2007
2I04
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BU of 2i04 by Molmil
X-ray crystal structure of MAGI-1 PDZ1 bound to the C-terminal peptide of HPV18 E6
分子名称: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1, SULFATE ION, ...
著者Chen, X.S, Zhang, Y, Dasgupta, J, Banks, L, Thomas, M.
登録日2006-08-09
公開日2007-02-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structures of a Human Papillomavirus (HPV) E6 Polypeptide Bound to MAGUK Proteins: Mechanisms of Targeting Tumor Suppressors by a High-Risk HPV Oncoprotein.
J.Virol., 81, 2007
6IQR
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BU of 6iqr by Molmil
Crystal structure of Prc with S452I and L252Y mutations
分子名称: Tail-specific protease
著者Chueh, C.K, Chang, C.I.
登録日2018-11-08
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.42 Å)
主引用文献Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases.
Mbio, 10, 2019
6IQS
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BU of 6iqs by Molmil
Crystal structure of Prc with L245A and L340G mutations in complex with NlpI
分子名称: Lipoprotein NlpI, Tail-specific protease
著者Chuech, C.K, Chang, C.I.
登録日2018-11-08
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases.
Mbio, 10, 2019
6JJL
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BU of 6jjl by Molmil
Crystal structure of the DegP dodecamer with a modulator
分子名称: CYS-TYR-ARG-LYS-LEU, Periplasmic serine endoprotease DegP
著者Cho, H, Choi, Y, Lee, H.H, Kim, S.
登録日2019-02-26
公開日2020-09-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy.
Commun Biol, 3, 2020
7M4R
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BU of 7m4r by Molmil
Structural basis for SARS-CoV-2 envelope protein in recognition of human cell junction protein PALS1
分子名称: Envelope small membrane protein, MAGUK p55 subfamily member 5
著者Liu, Q, Chai, J.
登録日2021-03-22
公開日2021-03-31
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Structural basis for SARS-CoV-2 envelope protein recognition of human cell junction protein PALS1.
Nat Commun, 12, 2021
7YKF
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BU of 7ykf by Molmil
Crystal structure of MAGI2 PDZ0-GK/pEphexin4 complex
分子名称: Ephexin4, Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2
著者Zhang, M, Lin, L, Zhu, J.
登録日2022-07-22
公開日2023-08-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Phosphorylation-dependent recognition of diverse protein targets by the cryptic GK domain of MAGI MAGUKs.
Sci Adv, 9, 2023
7YKI
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BU of 7yki by Molmil
Crystal structure of MAGI2 PDZ0-GK domain in complex with phospho-SAPAP1 GBR3 peptide
分子名称: GLYCEROL, Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2, ...
著者Zhang, M, Lin, L, Zhu, J.
登録日2022-07-22
公開日2023-08-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Phosphorylation-dependent recognition of diverse protein targets by the cryptic GK domain of MAGI MAGUKs.
Sci Adv, 9, 2023
7YKG
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Crystal structure of MAGI2 PDZ0-GK/pSGEF complex
分子名称: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2, SGEF
著者Zhang, M, Lin, L, Zhu, J.
登録日2022-07-22
公開日2023-08-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Phosphorylation-dependent recognition of diverse protein targets by the cryptic GK domain of MAGI MAGUKs.
Sci Adv, 9, 2023
7YKH
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BU of 7ykh by Molmil
Crystal structure of MAGI2 PDZ0-GK domain in complex with phospho-SAPAP1 GBR2 peptide
分子名称: GLYCEROL, Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2, ...
著者Zhang, M, Lin, L, Zhu, J.
登録日2022-07-22
公開日2023-08-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Phosphorylation-dependent recognition of diverse protein targets by the cryptic GK domain of MAGI MAGUKs.
Sci Adv, 9, 2023
4WSI
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BU of 4wsi by Molmil
Crystal Structure of PALS1/Crb complex
分子名称: MAGUK p55 subfamily member 5, Protein crumbs
著者Wei, Z, Li, Y, Zhang, M.
登録日2014-10-28
公開日2014-11-26
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structure of Crumbs tail in complex with the PALS1 PDZ-SH3-GK tandem reveals a highly specific assembly mechanism for the apical Crumbs complex.
Proc.Natl.Acad.Sci.USA, 111, 2014
7W6X
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BU of 7w6x by Molmil
Crystal structure of E. coli RseP in complex with batimastat
分子名称: 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE, Regulator of sigma-E protease RseP, ZINC ION
著者Takanuki, K, Imaizumi, Y, Nogi, T.
登録日2021-12-02
公開日2022-09-07
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP.
Sci Adv, 8, 2022
4A9G
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BU of 4a9g by Molmil
Symmetrized cryo-EM reconstruction of E. coli DegQ 24-mer in complex with beta-casein
分子名称: PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ
著者Malet, H, Canellas, F, Sawa, J, Yan, J, Thalassinos, K, Ehrmann, M, Clausen, T, Saibil, H.R.
登録日2011-11-26
公開日2012-01-11
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq
Nat.Struct.Mol.Biol., 19, 2012
4A8C
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BU of 4a8c by Molmil
Symmetrized cryo-EM reconstruction of E. coli DegQ 12-mer in complex with a binding peptide
分子名称: PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ
著者Malet, H, Canellas, F, Sawa, J, Yan, J, Thalassinos, K, Ehrmann, M, Clausen, T, Saibil, H.R.
登録日2011-11-20
公開日2012-01-11
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq
Nat.Struct.Mol.Biol., 19, 2012
6IQQ
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BU of 6iqq by Molmil
Crystal structure of Prc with S452I and L252Y mutations in complex with NlpI
分子名称: CALCIUM ION, Lipoprotein NlpI, Tail-specific protease
著者Chueh, C.K, Chang, C.I.
登録日2018-11-08
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases.
Mbio, 10, 2019
6IRD
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BU of 6ird by Molmil
Complex structure of INADL PDZ89 and PLCb4 C-terminal CC-PBM
分子名称: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase, GOLD ION, InaD-like protein
著者Ye, F, Li, J, Huang, Y, Liu, W, Zhang, M.
登録日2018-11-12
公開日2019-01-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.813 Å)
主引用文献An unexpected INAD PDZ tandem-mediated plc beta binding in Drosophila photo receptors.
Elife, 7, 2018
6IRE
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BU of 6ire by Molmil
Complex structure of INAD PDZ45 and NORPA CC-PBM
分子名称: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase, Inactivation-no-after-potential D protein
著者Ye, F, Li, J, Deng, X, Liu, W, Zhang, M.
登録日2018-11-12
公開日2019-01-23
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献An unexpected INAD PDZ tandem-mediated plc beta binding in Drosophila photo receptors.
Elife, 7, 2018
6JJK
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BU of 6jjk by Molmil
Crystal structure of the DegP dodecamer with a modulator
分子名称: CYS-TYR-TYR-LYS-ILE, Periplasmic serine endoprotease DegP
著者Cho, H, Choi, Y, Lee, H.H, Kim, S.
登録日2019-02-26
公開日2020-09-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy
Commun Biol, 3, 2020
6JJO
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BU of 6jjo by Molmil
Crystal structure of the DegP dodecamer with a modulator
分子名称: Periplasmic serine endoprotease DegP, TMB-CYRKL modulator
著者Cho, H, Choi, Y, Lee, H.H, Kim, S.
登録日2019-02-26
公開日2020-09-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (4.157 Å)
主引用文献Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy
Commun Biol, 3, 2020
5WQL
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BU of 5wql by Molmil
Structure of a PDZ-protease bound to a substrate-binding adaptor
分子名称: ALA-ALA-ALA-ALA, ALA-ALA-ALA-ALA-ALA-ALA, LEU-SER-ARG-SER, ...
著者Su, M.Y, Chang, C.I.
登録日2016-11-27
公開日2017-11-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of adaptor-mediated protein degradation by the tail-specific PDZ-protease Prc
Nat Commun, 8, 2017
5V6T
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BU of 5v6t by Molmil
The Plexin D1 intracellular region in complex with GIPC1
分子名称: PDZ domain-containing protein GIPC1, Plexin-D1, SULFATE ION
著者Shang, G, Zhang, X.
登録日2017-03-17
公開日2017-05-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.189 Å)
主引用文献Structure analyses reveal a regulated oligomerization mechanism of the PlexinD1/GIPC/myosin VI complex.
Elife, 6, 2017
3STJ
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BU of 3stj by Molmil
Crystal structure of the protease + PDZ1 domain of DegQ from Escherichia coli
分子名称: Protease degQ, peptide (UNK)
著者Sawa, J, Malet, H, Krojer, T, Canellas, F, Ehrmann, M, Clausen, T.
登録日2011-07-11
公開日2011-07-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Molecular adaptation of the DegQ protease to exert protein quality control in the bacterial cell envelope.
J.Biol.Chem., 286, 2011
3SHW
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BU of 3shw by Molmil
Crystal structure of ZO-1 PDZ3-SH3-Guk supramodule complex with Connexin-45 peptide
分子名称: Gap junction gamma-1 protein, Tight junction protein ZO-1
著者Yu, J, Pan, L, Chen, J, Yu, H, Zhang, M.
登録日2011-06-17
公開日2011-09-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The Structure of the PDZ3-SH3-GuK Tandem of ZO-1 Suggests a Supramodular Organization of the Conserved MAGUK Family Scaffold Core
To be Published

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