PDB: 660 件ウェブページステータス検索Chemie searchBIRD

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2L4T	GIP/Glutaminase L peptide complex 分子名称: Glutaminase L peptide, Tax1-binding protein 3 著者 Zoetewey, D.L, Ovee, M, Banerjee, M, Bhaskaran, R, Mohanty, S. 登録日 2010-10-13 公開日 2011-04-06 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Promiscuous binding at the crossroads of numerous cancer pathways: insight from the binding of glutaminase interacting protein with glutaminase L. Biochemistry, 50, 2011
2EEG	Solution Structure of PDZ domain of PDZ and LIM domain protein 分子名称: PDZ and LIM domain protein 4 著者 Niraula, T.N, Tomizawa, T, Koshiba, K, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-02-15 公開日 2007-08-21 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution Structure of PDZ domain of PDZ and LIM domain protein To be published
2EEJ	Solution Structure of Fourth PDZ domain of PDZ Domain Containing Protein 1 分子名称: PDZ domain-containing protein 1 著者 Niraula, T.N, Tomizawa, T, Koshiba, K, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-02-15 公開日 2008-02-26 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution Structure of Fourth PDZ domain of PDZ Domain Containing Protein 1 To be Published
2FCF	The crystal structure of the 7th PDZ domain of MPDZ (MUPP-1) 分子名称: Multiple PDZ domain protein 著者 Papagrigoriou, E, Berridge, G, Johansson, C, Colebrook, S, Salah, E, Burgess, N, Smee, C, Savitsky, P, Bray, J, Schoch, G, Phillips, C, Gileadi, C, Soundarajan, M, Yang, X, Elkins, J.M, Gorrec, F, Turnbull, A, Edwards, A, Arrowsmith, C, Weigelt, J, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC) 登録日 2005-12-12 公開日 2006-01-17 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Structure of PICK1 and other PDZ domains obtained with the help of self-binding C-terminal extensions. Protein Sci., 16, 2007
2FNE	The crystal structure of the 13th PDZ domain of MPDZ 分子名称: Multiple PDZ domain protein 著者 Papagrigoriou, E, Berridge, G, Johansson, C, Colebrook, S, Salah, E, Burgess, N, Smee, C, Savitsky, P, Bray, J, Schoch, G, Phillips, C, Gileadi, C, Soundarajan, M, Yang, X, Elkins, J.M, Gorrec, F, Turnbull, A, Edwards, A, Arrowsmith, C, Weigelt, J, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC) 登録日 2006-01-11 公開日 2006-01-24 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Structure of PICK1 and other PDZ domains obtained with the help of self-binding C-terminal extensions. Protein Sci., 16, 2007
7M4R	Structural basis for SARS-CoV-2 envelope protein in recognition of human cell junction protein PALS1 分子名称: Envelope small membrane protein, MAGUK p55 subfamily member 5 著者 Liu, Q, Chai, J. 登録日 2021-03-22 公開日 2021-03-31 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.65 Å) 主引用文献 Structural basis for SARS-CoV-2 envelope protein recognition of human cell junction protein PALS1. Nat Commun, 12, 2021
5E6P	PlexinB2 cytoplasmic region/PDZ-RhoGEF PDZ domain complex 分子名称: Plexin-B2, Rho guanine nucleotide exchange factor 11 著者 Pascoe, H.G, Zhang, X. 登録日 2015-10-10 公開日 2015-11-18 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.215 Å) 主引用文献 Secondary PDZ domain-binding site on class B plexins enhances the affinity for PDZ-RhoGEF. Proc.Natl.Acad.Sci.USA, 112, 2015
5V6T	The Plexin D1 intracellular region in complex with GIPC1 分子名称: PDZ domain-containing protein GIPC1, Plexin-D1, SULFATE ION 著者 Shang, G, Zhang, X. 登録日 2017-03-17 公開日 2017-05-31 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.189 Å) 主引用文献 Structure analyses reveal a regulated oligomerization mechanism of the PlexinD1/GIPC/myosin VI complex. Elife, 6, 2017
8XUD	Crystal structure of adaptor NlpI in complex with endopeptidase MepS and PDZ-protease Prc 分子名称: Lipoprotein NlpI, Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase, PHOSPHATE ION, ... 著者 Tzeng, S.R, Wang, S, Huang, C.H. 登録日 2024-01-12 公開日 2024-06-05 実験手法 X-RAY DIFFRACTION (3.49 Å) 主引用文献 Crystal structure of lipoprotein NlpI in complex with MepS To Be Published
7W6X	Crystal structure of E. coli RseP in complex with batimastat 分子名称: 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE, Regulator of sigma-E protease RseP, ZINC ION 著者 Takanuki, K, Imaizumi, Y, Nogi, T. 登録日 2021-12-02 公開日 2022-09-07 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Mechanistic insights into intramembrane proteolysis by E. coli site-2 protease homolog RseP. Sci Adv, 8, 2022
5WQL	Structure of a PDZ-protease bound to a substrate-binding adaptor 分子名称: ALA-ALA-ALA-ALA, ALA-ALA-ALA-ALA-ALA-ALA, LEU-SER-ARG-SER, ... 著者 Su, M.Y, Chang, C.I. 登録日 2016-11-27 公開日 2017-11-22 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of adaptor-mediated protein degradation by the tail-specific PDZ-protease Prc Nat Commun, 8, 2017
4WSI	Crystal Structure of PALS1/Crb complex 分子名称: MAGUK p55 subfamily member 5, Protein crumbs 著者 Wei, Z, Li, Y, Zhang, M. 登録日 2014-10-28 公開日 2014-11-26 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Structure of Crumbs tail in complex with the PALS1 PDZ-SH3-GK tandem reveals a highly specific assembly mechanism for the apical Crumbs complex. Proc.Natl.Acad.Sci.USA, 111, 2014
6SAK	Structure of the OTULINcat C129A - SNX27 PDZ domain complex. 分子名称: GLYCEROL, SULFATE ION, Sorting nexin-27, ... 著者 Elliott, P.R, Komander, D. 登録日 2019-07-17 公開日 2019-10-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Regulation of the endosomal SNX27-retromer by OTULIN. Nat Commun, 10, 2019
4A9G	Symmetrized cryo-EM reconstruction of E. coli DegQ 24-mer in complex with beta-casein 分子名称: PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ 著者 Malet, H, Canellas, F, Sawa, J, Yan, J, Thalassinos, K, Ehrmann, M, Clausen, T, Saibil, H.R. 登録日 2011-11-26 公開日 2012-01-11 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (7.5 Å) 主引用文献 Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq Nat.Struct.Mol.Biol., 19, 2012
4A8C	Symmetrized cryo-EM reconstruction of E. coli DegQ 12-mer in complex with a binding peptide 分子名称: PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ 著者 Malet, H, Canellas, F, Sawa, J, Yan, J, Thalassinos, K, Ehrmann, M, Clausen, T, Saibil, H.R. 登録日 2011-11-20 公開日 2012-01-11 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (7.5 Å) 主引用文献 Newly Folded Substrates Inside the Molecular Cage of the Htra Chaperone Degq Nat.Struct.Mol.Biol., 19, 2012
1KY9	Crystal Structure of DegP (HtrA) 分子名称: PROTEASE DO 著者 Krojer, T, Garrido-Franco, M, Huber, R, Ehrmann, M, Clausen, T. 登録日 2002-02-04 公開日 2002-04-03 最終更新日 2021-10-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of DegP (HtrA) reveals a new protease-chaperone machine. Nature, 416, 2002
6IQQ	Crystal structure of Prc with S452I and L252Y mutations in complex with NlpI 分子名称: CALCIUM ION, Lipoprotein NlpI, Tail-specific protease 著者 Chueh, C.K, Chang, C.I. 登録日 2018-11-08 公開日 2019-07-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases. Mbio, 10, 2019
6IRD	Complex structure of INADL PDZ89 and PLCb4 C-terminal CC-PBM 分子名称: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase, GOLD ION, InaD-like protein 著者 Ye, F, Li, J, Huang, Y, Liu, W, Zhang, M. 登録日 2018-11-12 公開日 2019-01-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.813 Å) 主引用文献 An unexpected INAD PDZ tandem-mediated plc beta binding in Drosophila photo receptors. Elife, 7, 2018
6IQR	Crystal structure of Prc with S452I and L252Y mutations 分子名称: Tail-specific protease 著者 Chueh, C.K, Chang, C.I. 登録日 2018-11-08 公開日 2019-07-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.42 Å) 主引用文献 Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases. Mbio, 10, 2019
6IQS	Crystal structure of Prc with L245A and L340G mutations in complex with NlpI 分子名称: Lipoprotein NlpI, Tail-specific protease 著者 Chuech, C.K, Chang, C.I. 登録日 2018-11-08 公開日 2019-07-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases. Mbio, 10, 2019
6JJL	Crystal structure of the DegP dodecamer with a modulator 分子名称: CYS-TYR-ARG-LYS-LEU, Periplasmic serine endoprotease DegP 著者 Cho, H, Choi, Y, Lee, H.H, Kim, S. 登録日 2019-02-26 公開日 2020-09-02 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy. Commun Biol, 3, 2020
6JJK	Crystal structure of the DegP dodecamer with a modulator 分子名称: CYS-TYR-TYR-LYS-ILE, Periplasmic serine endoprotease DegP 著者 Cho, H, Choi, Y, Lee, H.H, Kim, S. 登録日 2019-02-26 公開日 2020-09-02 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy Commun Biol, 3, 2020
6JJO	Crystal structure of the DegP dodecamer with a modulator 分子名称: Periplasmic serine endoprotease DegP, TMB-CYRKL modulator 著者 Cho, H, Choi, Y, Lee, H.H, Kim, S. 登録日 2019-02-26 公開日 2020-09-02 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (4.157 Å) 主引用文献 Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy Commun Biol, 3, 2020
3MH4	HtrA proteases are activated by a conserved mechanism that can be triggered by distinct molecular cues 分子名称: Protease do 著者 Krojer, T, Sawa, J, Huber, R, Clausen, T. 登録日 2010-04-07 公開日 2010-06-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 HtrA proteases have a conserved activation mechanism that can be triggered by distinct molecular cues Nat.Struct.Mol.Biol., 17, 2010
3MH5	HtrA proteases are activated by a conserved mechanism that can be triggered by distinct molecular cues 分子名称: DIISOPROPYL PHOSPHONATE, Protease do 著者 Krojer, T, Sawa, J, Huber, R, Clausen, T. 登録日 2010-04-07 公開日 2010-06-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 HtrA proteases have a conserved activation mechanism that can be triggered by distinct molecular cues Nat.Struct.Mol.Biol., 17, 2010

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