PDB: 37932 件ウェブページステータス検索Chemie searchBIRD

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4ZB4	Spliceosome component 分子名称: Pre-mRNA-processing factor 19 著者 Rocha de Moura, T, Pena, P. 登録日 2015-04-14 公開日 2016-09-14 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Spliceosome component To Be Published
1JXV	Crystal Structure of Human Nucleoside Diphosphate Kinase A 分子名称: Nucleoside Diphosphate Kinase A 著者 Min, K, Song, H.K, Chang, C, Kim, S.Y, Lee, K.J, Suh, S.W. 登録日 2001-09-10 公開日 2002-04-10 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of human nucleoside diphosphate kinase A, a metastasis suppressor. Proteins, 46, 2002
7M7K	Crystal structure of uridine bound to Geobacillus thermoglucosidasius pyrimidine nucleoside phosphorylase PyNP 分子名称: Pyrimidine-nucleoside phosphorylase, SULFATE ION, URIDINE 著者 Pausch, P, Bange, G. 登録日 2021-03-28 公開日 2021-08-25 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Diversification of 4'-Methylated Nucleosides by Nucleoside Phosphorylases Acs Catalysis, 2021
4F36	Crystal structure of Nucleoside diphosphate kinase B from Trypanosoma brucei, apo form 分子名称: Nucleoside diphosphate kinase, THIOCYANATE ION 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-05-08 公開日 2012-05-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of Nucleoside diphosphate kinase B from Trypanosoma brucei, apo form To be Published
1WKJ	Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8 分子名称: nucleoside diphosphate kinase 著者 Takeishi, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2004-05-31 公開日 2005-08-23 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8 To be Published
5E13	Crystal structure of Eosinophil-derived neurotoxin in complex with the triazole double-headed ribonucleoside 11c 分子名称: 3'-{4-[(4-amino-2-oxopyrimidin-1(2H)-yl)methyl]-1H-1,2,3-triazol-1-yl}-3'-deoxyadenosine, Non-secretory ribonuclease 著者 Chatzileontiadou, D.S.M, Stravodimos, G.A, Kantsadi, A.L, Leonidas, D.D. 登録日 2015-09-29 公開日 2015-11-18 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Triazole double-headed ribonucleosides as inhibitors of eosinophil derived neurotoxin. Bioorg.Chem., 63, 2015
7OHB	TBP-nucleosome complex 分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ... 著者 Wang, H, Cramer, P. 登録日 2021-05-10 公開日 2021-07-28 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structures and implications of TBP-nucleosome complexes. Proc.Natl.Acad.Sci.USA, 118, 2021
5EP8	X-Ray Structure of the Complex Pyrimidine-nucleoside phosphorylase from Bacillus subtilis with Sulfate Ion 分子名称: Pyrimidine-nucleoside phosphorylase, SODIUM ION, SULFATE ION 著者 Lashkov, A.A, Balaev, V.V, Gabdoulkhakov, A.G, Betzel, C, Mikhailov, A.M. 登録日 2015-11-11 公開日 2016-11-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.66 Å) 主引用文献 X-Ray Structure of the Complex Pyrimidine-nucleoside phosphorylase from Bacillus subtilis with Sulfate Ion To Be Published
5GSE	Crystal structure of unusual nucleosome 分子名称: DNA (250-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ... 著者 Kato, D, Osakabe, A, Arimura, Y, Park, S.Y, Kurumizaka, H. 登録日 2016-08-16 公開日 2017-05-03 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.14 Å) 主引用文献 Crystal structure of the overlapping dinucleosome composed of hexasome and octasome Science, 356, 2017
7OHA	nucleosome with TBP and TFIIA bound at SHL +2 分子名称: DNA (122-MER), Histone H2A, Histone H2B 1.1, ... 著者 Wang, H, Cramer, P. 登録日 2021-05-09 公開日 2021-07-28 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structures and implications of TBP-nucleosome complexes. Proc.Natl.Acad.Sci.USA, 118, 2021
7OH9	Nucleosome with TBP and TFIIA bound at SHL -6 分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ... 著者 Wang, H, Cramer, P. 登録日 2021-05-09 公開日 2021-07-28 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structures and implications of TBP-nucleosome complexes. Proc.Natl.Acad.Sci.USA, 118, 2021
8ATF	Nucleosome-bound Ino80 ATPase 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (226-MER), DNA (227-MER), ... 著者 Kunert, F, Metzner, F.J, Eustermann, S, Jung, J, Woike, S, Schall, K, Kostrewa, D, Hopfner, K.P. 登録日 2022-08-23 公開日 2022-12-14 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.45 Å) 主引用文献 Structural mechanism of extranucleosomal DNA readout by the INO80 complex. Sci Adv, 8, 2022
7K7G	nucleosome and Gal4 complex 分子名称: Centromere DNA-binding protein complex CBF3 subunit B, DNA (147-MER), Histone H2A.1, ... 著者 Ruifang, G, Yawen, B. 登録日 2020-09-22 公開日 2021-03-31 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural and dynamic mechanisms of CBF3-guided centromeric nucleosome formation. Nat Commun, 12, 2021
1OFC	nucleosome recognition module of ISWI ATPase 分子名称: 4-deoxy-alpha-D-glucopyranose, GLYCEROL, ISWI PROTEIN, ... 著者 Grune, T, Muller, C.W. 登録日 2003-04-10 公開日 2003-09-05 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure and Functional Analysis of a Nucleosome Recognition Module of the Remodeling Factor Iswi Mol.Cell, 12, 2003
2NZD	Nucleosome core particle containing 145 bp of DNA 分子名称: DNA (145-MER), Histone H2B, Histone H3, ... 著者 Ong, M.S, Richmond, T.J, Davey, C.A. 登録日 2006-11-23 公開日 2007-04-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 DNA stretching and extreme kinking in the nucleosome core J.Mol.Biol., 368, 2007
8GHZ	Cryo-EM structure of fish immunogloblin M-Fc 分子名称: Teleost immunoglobulin M protein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Lyu, M, Stadtmueller, B.M, Malyutin, A.G. 登録日 2023-03-13 公開日 2023-11-08 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.78 Å) 主引用文献 The structure of the teleost Immunoglobulin M core provides insights on polymeric antibody evolution, assembly, and function. Nat Commun, 14, 2023
1QKQ	CHARCOT-LEYDEN CRYSTAL PROTEIN - MANNOSE COMPLEX 分子名称: EOSINOPHIL LYSOPHOSPHOLIPASE, alpha-D-mannopyranose 著者 Swaminathan, G.J, Leonidas, D.D, Acharya, K.R. 登録日 1999-07-31 公開日 2000-01-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Selective recognition of mannose by the human eosinophil Charcot-Leyden crystal protein (galectin-10): a crystallographic study at 1.8 A resolution. Biochemistry, 38, 1999
7ABH	Human pre-Bact-2 spliceosome (SF3b/U2 snRNP portion) 分子名称: Cell division cycle 5-like protein, DNA/RNA-binding protein KIN17, MINX M3 pre-mRNA, ... 著者 Townsend, C, Kastner, B, Leelaram, M.N, Bertram, K, Stark, H, Luehrmann, R. 登録日 2020-09-07 公開日 2020-12-09 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Mechanism of protein-guided folding of the active site U2/U6 RNA during spliceosome activation. Science, 370, 2020
2BEF	CRYSTAL STRUCTURE OF NDP KINASE COMPLEXED WITH MG, ADP, AND BEF3 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ... 著者 Xu, Y.W, Cherfils, J. 登録日 1998-05-26 公開日 1998-08-12 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 AlF3 mimics the transition state of protein phosphorylation in the crystal structure of nucleoside diphosphate kinase and MgADP. Proc.Natl.Acad.Sci.USA, 94, 1997
3NGT	Structure of Leishmania NDKb complexed with AMP. 分子名称: ADENOSINE MONOPHOSPHATE, Nucleoside diphosphate kinase 著者 Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T. 登録日 2010-06-13 公開日 2011-04-27 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.57 Å) 主引用文献 Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding. Mol Biosyst, 7, 2011
3NGU	Structure of Leishmania NDKb complexed with ADP. 分子名称: ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase 著者 Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T. 登録日 2010-06-13 公開日 2011-04-27 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding. Mol Biosyst, 7, 2011
8QEW	Eosinophil Derived Neurotoxin/RNase 2 in complex with Tartrate 分子名称: L(+)-TARTARIC ACID, Non-secretory ribonuclease 著者 Li, J, Kang, X, Prats-Ejarque, G, Boix, E. 登録日 2023-09-01 公開日 2024-09-11 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Eosinophil Derived Neurotoxin/RNase 2 in complex with Tartrate To Be Published
3O62	Nucleosome core particle modified with a cisplatin 1,3-cis-{Pt(NH3)2}2+-d(GpTpG) intrastrand cross-link 分子名称: Cisplatin, DNA (146-MER), Histone H2A type 1, ... 著者 Lippard, S.J, Todd, R.C. 登録日 2010-07-28 公開日 2011-01-05 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.216 Å) 主引用文献 Consequences of Cisplatin binding on nucleosome structure and dynamics. Chem.Biol., 17, 2010
3JS9	Crystal structure of nucleoside diphosphate kinase family protein from Babesia bovis 分子名称: Nucleoside diphosphate kinase family protein, SULFATE ION 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2009-09-09 公開日 2009-09-22 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of nucleoside diphosphate kinase family protein from Babesia bovis To be Published
3LEL	Structural Insight into the Sequence-Dependence of Nucleosome Positioning 分子名称: 147-MER DNA, Histone H2A, Histone H2B 1.1, ... 著者 Wu, B, Vasudevan, D, Davey, C.A. 登録日 2010-01-15 公開日 2010-05-19 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Structural insight into the sequence dependence of nucleosome positioning Structure, 18, 2010

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