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8FLD
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BU of 8fld by Molmil
Human nuclear pre-60S ribosomal subunit (State L1)
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
5N2I
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BU of 5n2i by Molmil
F420:NADPH oxidoreductase from Thermobifida fusca with NADP+ bound
分子名称: GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Reduced coenzyme F420:NADP oxidoreductase
著者Kumar, H, Nguyen, Q.-T, Binda, C, Mattevi, A, Fraaije, M.W.
登録日2017-02-07
公開日2017-04-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Isolation and characterization of a thermostable F420:NADPH oxidoreductase from Thermobifida fusca.
J. Biol. Chem., 292, 2017
5N6T
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BU of 5n6t by Molmil
Thermotoga maritima family 1 glycoside hydrolase complexed with a cyclophellitol analogue transition state mimic
分子名称: 1,2-ETHANEDIOL, Beta-glucosidase A, CHLORIDE ION, ...
著者Offen, W, Davies, G.
登録日2017-02-16
公開日2017-03-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Carba-cyclophellitols Are Neutral Retaining-Glucosidase Inhibitors.
J. Am. Chem. Soc., 139, 2017
3GDN
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BU of 3gdn by Molmil
Almond hydroxynitrile lyase in complex with benzaldehyde
分子名称: (2R)-hydroxy(phenyl)ethanenitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Dreveny, I, Gruber, K, Kratky, C.
登録日2009-02-24
公開日2009-03-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Substrate binding in the FAD-dependent hydroxynitrile lyase from almond provides insight into the mechanism of cyanohydrin formation and explains the absence of dehydrogenation activity.
Biochemistry, 48, 2009
4YHG
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BU of 4yhg by Molmil
NATIVE BACTEROIDETES-AFFILIATED GH5 CELLULASE LINKED WITH A POLYSACCHARIDE UTILIZATION LOCUS
分子名称: GH5, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Naas, A.E, MacKenzie, A.K, Dalhus, B, Eijsink, V.G.H, Pope, P.B.
登録日2015-02-27
公開日2015-07-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Features of a Bacteroidetes-Affiliated Cellulase Linked with a Polysaccharide Utilization Locus.
Sci Rep, 5, 2015
8FKZ
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BU of 8fkz by Molmil
Human nucleolar pre-60S ribosomal subunit (State G)
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L12, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FL7
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BU of 8fl7 by Molmil
Human nuclear pre-60S ribosomal subunit (State J2)
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FLE
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BU of 8fle by Molmil
Human nuclear pre-60S ribosomal subunit (State L2)
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.48 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FL3
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BU of 8fl3 by Molmil
Human nuclear pre-60S ribosomal subunit (State I2)
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.53 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
8FLB
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BU of 8flb by Molmil
Human nuclear pre-60S ribosomal subunit (State K2)
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
5XFW
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BU of 5xfw by Molmil
Crystal structures of FMN-free form of dihydroorotate dehydrogenase from Trypanosoma brucei
分子名称: Dihydroorotate dehydrogenase (fumarate), MALONATE ION
著者Kubota, T, Tani, O, Yamaguchi, T, Namatame, I, Sakashita, H, Furukawa, K, Yamasaki, K.
登録日2017-04-11
公開日2018-04-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of FMN-bound and FMN-free forms of dihydroorotate dehydrogenase fromTrypanosoma brucei.
FEBS Open Bio, 8, 2018
5N6S
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BU of 5n6s by Molmil
Thermotoga maritima family 1 Glycoside hydrolase complexed with Carba-Cyclophellitol transition state mimic
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Beta-glucosidase A, ...
著者Offen, W, Davies, G.
登録日2017-02-16
公開日2017-03-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Carba-cyclophellitols Are Neutral Retaining-Glucosidase Inhibitors.
J. Am. Chem. Soc., 139, 2017
8PP7
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BU of 8pp7 by Molmil
human RYBP-PRC1 bound to mononucleosome
分子名称: DNA (215-mer), E3 ubiquitin-protein ligase RING2, Histone H2A, ...
著者Ciapponi, M, Benda, C, Mueller, J.
登録日2023-07-06
公開日2024-03-27
最終更新日2024-07-31
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Structural basis of the histone ubiquitination read-write mechanism of RYBP-PRC1.
Nat.Struct.Mol.Biol., 31, 2024
5L83
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BU of 5l83 by Molmil
Complex of potato ATG8 protein with a peptide from Irish potato famine pathogen effector protein PexRD54
分子名称: 1,2-ETHANEDIOL, ASP-TRP-GLU-ILE-VAL, Autophagy-related protein, ...
著者Maqbool, A, Hughes, R.K, Banfield, M.J.
登録日2016-06-06
公開日2016-08-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis of Host Autophagy-related Protein 8 (ATG8) Binding by the Irish Potato Famine Pathogen Effector Protein PexRD54.
J.Biol.Chem., 291, 2016
5NPF
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BU of 5npf by Molmil
Crystal structure of txGH116 (beta-glucosidase from Thermoanaerobacterium xylolyticum) in complex with beta Cyclophellitol Cyclosulfate probe ME594
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Glucosylceramidase, ...
著者Wu, L, Offen, W.A, Breen, I.Z, Davies, G.J.
登録日2017-04-16
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献1,6-Cyclophellitol Cyclosulfates: A New Class of Irreversible Glycosidase Inhibitor.
ACS Cent Sci, 3, 2017
1YQ4
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BU of 1yq4 by Molmil
Avian respiratory complex ii with 3-nitropropionate and ubiquinone
分子名称: 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, 3-NITROPROPANOIC ACID, Coenzyme Q10, ...
著者Huang, L, Sun, G, Cobessi, D, Wang, A, Shen, J.T, Tung, E.Y, Anderson, V.E, Berry, E.A.
登録日2005-02-01
公開日2005-12-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献3-Nitropropionic Acid Is a Suicide Inhibitor of Mitochondrial Respiration That, upon Oxidation by Complex II, Forms a Covalent Adduct with a Catalytic Base Arginine in the Active Site of the Enzyme
J.Biol.Chem., 281, 2006
4ZFL
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BU of 4zfl by Molmil
Ergothioneine-biosynthetic Ntn hydrolase variant EgtC_C2A with natural substrate
分子名称: (1S)-1-carboxy-4-({(1R)-1-carboxy-2-[(S)-{4-[(2S)-2-carboxy-2-(trimethylammonio)ethyl]-1H-imidazol-2-yl}sulfinyl]ethyl}amino)-4-oxobutan-1-aminium, Amidohydrolase EgtC, GLYCEROL
著者Vit, A, Seebeck, F.P, Blankenfeldt, W.
登録日2015-04-21
公開日2015-07-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of the Ergothioneine-Biosynthesis Amidohydrolase EgtC.
Chembiochem, 16, 2015
2H89
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BU of 2h89 by Molmil
Avian Respiratory Complex II with Malonate Bound
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
著者Huang, L.S, Shen, J.T, Wang, A.C, Berry, E.A.
登録日2006-06-06
公開日2006-06-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic studies of the binding of ligands to the dicarboxylate site of Complex II, and the identity of the ligand in the
Biochim.Biophys.Acta, 1757
7CPY
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BU of 7cpy by Molmil
Lovastatin nonaketide synthase with LovC
分子名称: Lovastatin nonaketide synthase, enoyl reductase component lovC, polyketide synthase component, ...
著者Wang, J, Wang, Z.
登録日2020-08-08
公開日2021-01-13
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis for the biosynthesis of lovastatin.
Nat Commun, 12, 2021
6KOR
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BU of 6kor by Molmil
Crystal structure of the RRM domain of SYNCRIP
分子名称: Heterogeneous nuclear ribonucleoprotein Q
著者Chen, Y, Chan, J, Chen, W, Jobichen, C.
登録日2019-08-12
公開日2020-01-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.602 Å)
主引用文献SYNCRIP, a new player in pri-let-7a processing.
Rna, 26, 2020
3GDP
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BU of 3gdp by Molmil
Hydroxynitrile lyase from almond, monoclinic crystal form
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Dreveny, I, Gruber, K, Kratky, C.
登録日2009-02-24
公開日2009-03-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Substrate binding in the FAD-dependent hydroxynitrile lyase from almond provides insight into the mechanism of cyanohydrin formation and explains the absence of dehydrogenation activity.
Biochemistry, 48, 2009
2F1I
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BU of 2f1i by Molmil
Recombinase in Complex with AMP-PNP
分子名称: DNA repair and recombination protein radA, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Qian, X, He, Y, Wu, Y, Luo, Y.
登録日2005-11-14
公開日2006-05-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Asp302 determines potassium dependence of a RadA recombinase from Methanococcus voltae.
J.Mol.Biol., 360, 2006
1YQ3
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BU of 1yq3 by Molmil
Avian respiratory complex ii with oxaloacetate and ubiquinone
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Coenzyme Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-isomer, ...
著者Huang, L, Cobessi, D, Tung, E.Y, Berry, E.A.
登録日2005-02-01
公開日2005-12-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献3-Nitropropionic Acid Is a Suicide Inhibitor of Mitochondrial Respiration That, upon Oxidation by Complex II, Forms a Covalent Adduct with a Catalytic Base Arginine in the Active Site of the Enzyme
J.Biol.Chem., 281, 2006
2J5R
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BU of 2j5r by Molmil
2.25 A resolution structure of the wild type malate dehydrogenase from Haloarcula marismortui after second radiation burn (radiation damage series)
分子名称: CHLORIDE ION, MALATE DEHYDROGENASE
著者Fioravanti, E, Vellieux, F.M.D, Amara, P, Madern, D, Weik, M.
登録日2006-09-19
公開日2006-09-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Specific Radiation Damage to Acidic Residues and its Relation to Their Chemical and Structural Environment.
J.Synchrotron Radiat., 14, 2007
2J5Q
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BU of 2j5q by Molmil
2.15 A resolution structure of the wild type malate dehydrogenase from Haloarcula marismortui after first radiation burn (radiation damage series)
分子名称: CHLORIDE ION, MALATE DEHYDROGENASE
著者Fioravanti, E, Vellieux, F.M.D, Amara, P, Madern, D, Weik, M.
登録日2006-09-19
公開日2006-09-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Specific Radiation Damage to Acidic Residues and its Relation to Their Chemical and Structural Environment.
J.Synchrotron Radiat., 14, 2007

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