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4ORS
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BU of 4ors by Molmil
Three-dimensional structure of the C65A mutant of Human lipocalin-type Prostaglandin D Synthase apo-form
分子名称: Prostaglandin-H2 D-isomerase, SULFATE ION
著者Perduca, M, Bovi, M, Bertinelli, M, Bertini, E, Destefanis, L, Carrizo, M.E, Capaldi, S, Monaco, H.L.
登録日2014-02-12
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献High-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase.
Acta Crystallogr.,Sect.D, 70, 2014
6D45
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BU of 6d45 by Molmil
L89S Mutant of FeBMb Sperm Whale Myoglobin
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Bhagi-Damodaran, A, Mirts, E.N, Sandoval, B, Lu, Y.
登録日2018-04-17
公開日2018-05-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.779 Å)
主引用文献Heme redox potentials hold the key to reactivity differences between nitric oxide reductase and heme-copper oxidase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7LYZ
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BU of 7lyz by Molmil
PROTEIN MODEL BUILDING BY THE USE OF A CONSTRAINED-RESTRAINED LEAST-SQUARES PROCEDURE
分子名称: HEN EGG WHITE LYSOZYME
著者Moult, J, Yonath, A, Sussman, J, Herzberg, O, Podjarny, A, Traub, W.
登録日1977-05-06
公開日1977-06-20
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Protein Model Building by the Use of a Constrained-Restrained Least-Squares Procedure
J.Appl.Crystallogr., 16, 1983
4OS5
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BU of 4os5 by Molmil
Crystal structure of urokinase-type plasminogen activator (uPA) complexed with bicyclic peptide UK603 (bicyclic 2)
分子名称: SULFATE ION, Urokinase-type plasminogen activator, bicyclic peptide UK603 (bicyclic 2)
著者Chen, S, Pojer, F, Heinis, C.
登録日2014-02-12
公開日2014-09-24
最終更新日2021-06-02
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Dithiol amino acids can structurally shape and enhance the ligand-binding properties of polypeptides.
Nat Chem, 6, 2014
6JSF
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BU of 6jsf by Molmil
Crystal Structure of BACE1 in complex with N-(3-((4S,5S)-2-amino-4-methyl-5-phenyl-5,6-dihydro-4H-1,3-thiazin-4-yl)-4-fluorophenyl)-5-(fluoromethoxy)pyrazine-2-carboxamide
分子名称: Beta-secretase 1, DIMETHYL SULFOXIDE, IODIDE ION, ...
著者Fujimoto, K, Matsuoka, E, Asada, N, Tadano, G, Yamamoto, T, Nakahara, K, Fuchino, K, Ito, H, Kanegawa, N, Moechars, D, Gijsen, H.J.M, Kusakabe, K.I.
登録日2019-04-08
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-Based Design of Selective beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1) Inhibitors: Targeting the Flap to Gain Selectivity over BACE2.
J.Med.Chem., 62, 2019
6D4G
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BU of 6d4g by Molmil
N-GTPase domain of p190RhoGAP-A
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Rho GTPase-activating protein 35
著者Stiegler, A.L, Boggon, T.J.
登録日2018-04-18
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The N-Terminal GTPase Domain of p190RhoGAP Proteins Is a PseudoGTPase.
Structure, 26, 2018
5YLW
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BU of 5ylw by Molmil
CYP76AH1 from Salvia miltiorrhiza
分子名称: Ferruginol synthase, MANGANESE (II) ION, PROTOPORPHYRIN IX CONTAINING FE
著者Chang, Z.
登録日2017-10-20
公開日2018-10-24
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献CYP76AH1 from Salvia miltiorrhiza
To Be Published
6D6E
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BU of 6d6e by Molmil
Triclinic lysozyme (295 K) in the presence of 47% xylose
分子名称: Lysozyme C, NITRATE ION
著者Juers, D.H.
登録日2018-04-20
公開日2018-09-19
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
7LPR
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BU of 7lpr by Molmil
STRUCTURAL BASIS FOR BROAD SPECIFICITY IN ALPHA-LYTIC PROTEASE MUTANTS
分子名称: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-LEUCINE BORONIC ACID INHIBITOR, SULFATE ION
著者Fujishige, A, Bone, R, Agard, D.A.
登録日1991-08-05
公開日1993-01-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for broad specificity in alpha-lytic protease mutants.
Biochemistry, 30, 1991
6DH5
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BU of 6dh5 by Molmil
Crystal structure of HIV-1 Protease NL4-3 V82I Mutant in complex with UMass6
分子名称: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(1S,2R)-3-{[(4-aminophenyl)sulfonyl](2-ethylbutyl)amino}-1-benzyl-2-hydroxypropyl]carbamate, Protease, SULFATE ION
著者Lockbaum, G.J, Schiffer, C.A.
登録日2018-05-18
公開日2018-12-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.008 Å)
主引用文献Structural Adaptation of Darunavir Analogues against Primary Mutations in HIV-1 Protease.
ACS Infect Dis, 5, 2019
5VCK
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BU of 5vck by Molmil
HIV Protease (PR) with TL-3 in the active site and (Z)-N-(thiazol-2-yl)-N'-tosylcarbamimidate in the exosite
分子名称: 4-methyl-N-(thiazol-2-ylcarbamoyl)benzenesulfonamide, Protease, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
著者Tiefenbrunn, T, Stout, C.D.
登録日2017-03-31
公開日2018-04-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Fragment-based campaign for the identification of potential exosite binders of HIV-1 Protease
to be published
6DHC
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BU of 6dhc by Molmil
X-ray structure of BACE1 in complex with a bicyclic isoxazoline carboxamide as the P3 ligand
分子名称: (3R,3aR,6aS)-N-[(4R,7S,8S,10R,13S)-8-hydroxy-10,17-dimethyl-7-(2-methylpropyl)-5,11,14-trioxo-13-(propan-2-yl)-2-thia-6,12,15-triazaoctadecan-4-yl]hexahydrofuro[3,2-d][1,2]oxazole-3-carboxamide, Beta-secretase 1, GLYCEROL, ...
著者Mesecar, A.D, Lendy, E.K.
登録日2018-05-19
公開日2018-07-25
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Design, synthesis, X-ray studies, and biological evaluation of novel BACE1 inhibitors with bicyclic isoxazoline carboxamides as the P3 ligand.
Bioorg. Med. Chem. Lett., 28, 2018
7LHJ
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BU of 7lhj by Molmil
Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with 15-cis-retinal
分子名称: ACETATE ION, GLYCEROL, RETINAL, ...
著者Ehyaei, N, Geiger, J.H, Borhan, B.
登録日2021-01-25
公開日2021-02-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with 15cis- retinal
To Be Published
5V24
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BU of 5v24 by Molmil
Structure-based drug design of novel ASK1 inhibitors using a fully integrated lead optimization strategy
分子名称: 2-[4-(propan-2-yl)-4H-1,2,4-triazol-3-yl]-N-(pyridin-2-yl)-1,3-thiazole-4-carboxamide, Mitogen-activated protein kinase kinase kinase 5
著者Dougan, D.R, Lawson, J.D.
登録日2017-03-02
公開日2017-03-29
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-based drug design of novel ASK1 inhibitors using an integrated lead optimization strategy.
Bioorg. Med. Chem. Lett., 27, 2017
6DHS
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BU of 6dhs by Molmil
Structure of hnRNP H qRRM1,2
分子名称: Heterogeneous nuclear ribonucleoprotein H
著者Meagher, J.L, Stuckey, J.A.
登録日2018-05-21
公開日2018-09-12
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Differential Conformational Dynamics Encoded by the Inter-qRRM linker of hnRNP H.
J. Am. Chem. Soc., 2018
5YQH
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BU of 5yqh by Molmil
The crystal structure of CYP199A4 binding with 4-n-Propyl benzoic acid
分子名称: 4-methoxybenzamide, CHLORIDE ION, Cytochrome P450, ...
著者Zhou, W, Zhang, T, Qiao, R, Bell, S, Coleman, T.
登録日2017-11-06
公開日2019-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of CYP199A4 binding with 4-n-Propyl benzoic acid
To Be Published
5UK9
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BU of 5uk9 by Molmil
Wild-type K-Ras(GCP) pH 6.5
分子名称: GLYCEROL, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
著者Parker, J.A, Mattos, C.
登録日2017-01-20
公開日2018-01-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.887 Å)
主引用文献K-Ras Populates Conformational States Differently from Its Isoform H-Ras and Oncogenic Mutant K-RasG12D.
Structure, 26, 2018
5UKF
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BU of 5ukf by Molmil
Crystal Structure of the Human Vaccinia-related Kinase 1 Bound to an Oxindole Inhibitor
分子名称: 4-{[(Z)-(7-oxo-6,7-dihydro-8H-[1,3]thiazolo[5,4-e]indol-8-ylidene)methyl]amino}benzene-1-sulfonamide, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Counago, R.M, Wells, C, Zuercher, W, Willson, T.M, Bountra, C, Edwards, A.M, Arruda, P, Gileadi, O, Structural Genomics Consortium (SGC)
登録日2017-01-22
公開日2017-03-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural characterization of human Vaccinia-Related Kinases (VRK) bound to small-molecule inhibitors identifies different P-loop conformations.
Sci Rep, 7, 2017
4O6L
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BU of 4o6l by Molmil
Crystal Structure of TTK kinase domain with an inhibitor: 401498 (N-[(1R)-1-(2-chlorophenyl)propyl]-3-{4-[(1-methylpiperidin-4-yl)oxy]phenyl}-1H-indazole-5-carboxamide)
分子名称: Dual specificity protein kinase TTK, GLYCEROL, N-[(1R)-1-(2-chlorophenyl)propyl]-3-{4-[(1-methylpiperidin-4-yl)oxy]phenyl}-1H-indazole-5-carboxamide
著者Qiu, W, Plotnikova, O, Feher, M, Awrey, D.E, Chirgadze, N.Y.
登録日2013-12-22
公開日2014-12-24
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Crystal Structure of TTK kinase domain with an inhibitor: 401498
TO BE PUBLISHED
5YMX
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BU of 5ymx by Molmil
Myxococcus xanthus MglA in GDP bound conformation
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, GUANOSINE-5'-DIPHOSPHATE, ...
著者Baranwal, J, Gayathri, P.
登録日2017-10-22
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Allosteric regulation of a prokaryotic small Ras-like GTPase contributes to cell polarity oscillations in bacterial motility.
Plos Biol., 17, 2019
5V5J
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BU of 5v5j by Molmil
oxyferrous Dehaloperoxidase B
分子名称: Dehaloperoxidase B, GLYCEROL, OXYGEN MOLECULE, ...
著者Carey, L.M, Ghiladi, R.A.
登録日2017-03-14
公開日2018-03-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.814 Å)
主引用文献How nature tunes isoenzyme activity in the multifunctional catalytic globin dehaloperoxidase from Amphitrite ornata.
Biochim Biophys Acta Proteins Proteom, 1866, 2018
6D6F
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BU of 6d6f by Molmil
Triclinic lysozyme cryocooled to 100 K with 47% xylose as cryoprotectant
分子名称: Lysozyme C, NITRATE ION, alpha-D-xylopyranose
著者Juers, D.H.
登録日2018-04-20
公開日2018-09-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
6JT3
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BU of 6jt3 by Molmil
Crystal Structure of BACE1 in complex with N-{3-[(4R,5R,6R)-2-amino-5-fluoro-4,6-dimethyl-5,6-dihydro-4H-1,3-thiazin-4-yl]-4-fluorophenyl}-5-(fluoromethoxy)pyrazine-2-carboxamide
分子名称: Beta-secretase 1, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Tadano, G, Komano, K, Yoshida, S, Suzuki, S, Nakahara, K, Fuchino, K, Fujimoto, K, Matsuoka, E, Yamamoto, T, Asada, N, Ito, H, Sakaguchi, G, Kanegawa, N, Kido, Y, Ando, S, Fukushima, T, Teisman, A, Urmaliya, V, Dhuyvetter, D, Borghys, H, Bergh, A.V.D, Austin, N, Gijsen, H.J.M, Yamano, Y, Iso, Y, Kusakabe, K.I.
登録日2019-04-08
公開日2019-10-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Discovery of an Extremely Potent Thiazine-Based beta-Secretase Inhibitor with Reduced Cardiovascular and Liver Toxicity at a Low Projected Human Dose.
J.Med.Chem., 62, 2019
6DC0
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BU of 6dc0 by Molmil
Tribbles (TRIB1) pseudokinase fused to CCAAT-enhancer binding protein (C/EBPalpha) degron
分子名称: Tribbles homolog 1,CCAAT/enhancer-binding protein alpha
著者Jamieson, S.A, Brewster, J.L, Mace, P.D.
登録日2018-05-03
公開日2018-10-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Substrate binding allosterically relieves autoinhibition of the pseudokinase TRIB1.
Sci Signal, 11, 2018
5ULU
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BU of 5ulu by Molmil
Crystal Structure of Mouse Cadherin-23 EC19-21 (S2087P) with non-syndromic deafness (DFNB12) associated mutation D2148N
分子名称: CALCIUM ION, Cadherin-23
著者Jaiganesh, A, Sotomayor, M.
登録日2017-01-25
公開日2018-01-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness.
Structure, 26, 2018

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