Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8E3C
DownloadVisualize
BU of 8e3c by Molmil
Purification of Enterovirus A71, strain 4643, WT capsid
分子名称: VP1, VP2, VP3
著者Catching, A, Capponi, S, Andino, R.
登録日2022-08-16
公開日2023-08-30
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (7.1 Å)
主引用文献A tradeoff between enterovirus A71 particle stability and cell entry.
Nat Commun, 14, 2023
8E3B
DownloadVisualize
BU of 8e3b by Molmil
Purification of Enterovirus A71, strain 4643, WT capsid
分子名称: VP1, VP2, VP3
著者Catching, A, Capponi, S, Andino, R.
登録日2022-08-16
公開日2023-08-30
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献A tradeoff between enterovirus A71 particle stability and cell entry.
Nat Commun, 14, 2023
8E3A
DownloadVisualize
BU of 8e3a by Molmil
Purification of Enterovirus A71, strain 4643, WT capsid
分子名称: VP1, VP2, VP3, ...
著者Catching, A, Capponi, S, Andino, R.
登録日2022-08-16
公開日2023-08-30
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (7.4 Å)
主引用文献A tradeoff between enterovirus A71 particle stability and cell entry.
Nat Commun, 14, 2023
8E39
DownloadVisualize
BU of 8e39 by Molmil
Purification of Enterovirus A71, strain 4643, WT capsid
分子名称: SPHINGOSINE, VP1, VP2, ...
著者Catching, A, Capponi, S, Andino, R.
登録日2022-08-16
公開日2023-08-30
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献A tradeoff between enterovirus A71 particle stability and cell entry.
Nat Commun, 14, 2023
8E38
DownloadVisualize
BU of 8e38 by Molmil
Purification of Enterovirus A71, strain 4643, WT capsid
分子名称: SPHINGOSINE, VP1, VP2, ...
著者Catching, A, Capponi, S, Andino, R.
登録日2022-08-16
公開日2023-08-30
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献A tradeoff between enterovirus A71 particle stability and cell entry.
Nat Commun, 14, 2023
8E36
DownloadVisualize
BU of 8e36 by Molmil
E. coli 50S ribosome bound to compound streptogramin A analog 3146
分子名称: 2-[(3R,4R,5E,10E,12E,14S,16R,23S,26aR)-16-fluoro-14-hydroxy-12-methyl-1,7,22-trioxo-3-(propan-2-yl)-4,7,8,9,14,15,16,17,24,25,26,26a-dodecahydro-1H,3H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosin-4-yl]-N-{2-[4-(pyridin-4-yl)-1H-1,2,3-triazol-1-yl]ethyl}acetamide, 23S ribosomal RNA, 50S ribosomal protein L13, ...
著者Pellegrino, J, Lee, D.J, Fraser, J.S, Seiple, I.B.
登録日2022-08-16
公開日2023-06-28
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.38 Å)
主引用文献Potential for clicked streptogramin analogs
To Be Published
8E35
DownloadVisualize
BU of 8e35 by Molmil
E. coli 50S ribosome bound to compound SAB002
分子名称: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L15, ...
著者Pellegrino, J, Lee, D.J, Fraser, J.S, Seiple, I.B.
登録日2022-08-16
公開日2023-06-28
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.27 Å)
主引用文献Potential for clicked streptogramin analogs
To Be Published
8E33
DownloadVisualize
BU of 8e33 by Molmil
E. coli 50S ribosome bound to compound streptogramin analog SAB001
分子名称: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L15, ...
著者Pellegrino, J, Lee, D.J, Fraser, J.S, Seiple, I.B.
登録日2022-08-16
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (2.23 Å)
主引用文献Potential for clicked streptogramin analogs
To Be Published
8E32
DownloadVisualize
BU of 8e32 by Molmil
E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1
分子名称: (3R,4R,5E,10E,12E,14S,16R,23S,26aR)-16-fluoro-14-hydroxy-12-methyl-3-(propan-2-yl)-4-(prop-2-yn-1-yl)-3,4,8,9,14,15,16,17,24,25,26,26a-dodecahydro-1H,7H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosine-1,7,22-trione, 23S ribosomal RNA, 50S ribosomal protein L13, ...
著者Pellegrino, J, Lee, D.J, Fraser, J.S, Seiple, I.B.
登録日2022-08-16
公開日2023-06-28
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.35 Å)
主引用文献Potential for clicked streptogramin analogs
To Be Published
8E31
DownloadVisualize
BU of 8e31 by Molmil
Purification of Enterovirus A71, strain 4643, WT capsid
分子名称: Genome polyprotein, VP1, VP3
著者Catching, A, Capponi, S, Andino, R.
登録日2022-08-16
公開日2023-08-30
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献A tradeoff between enterovirus A71 particle stability and cell entry.
Nat Commun, 14, 2023
8E30
DownloadVisualize
BU of 8e30 by Molmil
E. coli 50S ribosome bound to compound streptogramin A analog 3142
分子名称: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L15, ...
著者Pellegrino, J, Lee, D.J, Fraser, J.S, Seiple, I.B.
登録日2022-08-16
公開日2023-06-28
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (1.91 Å)
主引用文献Potential for clicked streptogramin analogs
To Be Published
8E2Y
DownloadVisualize
BU of 8e2y by Molmil
Purification of Enterovirus A71, strain 4643, WT capsid
分子名称: Genome polyprotein, VP1, VP2
著者Catching, A, Capponi, S, Andino, R.
登録日2022-08-16
公開日2023-08-30
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献A tradeoff between enterovirus A71 particle stability and cell entry.
Nat Commun, 14, 2023
8E2X
DownloadVisualize
BU of 8e2x by Molmil
Purification of Enterovirus A71, strain 4643, WT capsid
分子名称: SPHINGOSINE, VP1, VP2, ...
著者Catching, A, Capponi, S, Andino, R.
登録日2022-08-16
公開日2023-08-30
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献A tradeoff between enterovirus A71 particle stability and cell entry.
Nat Commun, 14, 2023
8E2U
DownloadVisualize
BU of 8e2u by Molmil
HMPV F monomer bound to RSV-199 Fab
分子名称: Fusion glycoprotein F0, RSV-199 heavy chain, RSV-199 light chain
著者Wen, X, Jardetzky, T.S.
登録日2022-08-16
公開日2023-08-16
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (3.48 Å)
主引用文献Potent cross-neutralization of respiratory syncytial virus and human metapneumovirus through a structurally conserved antibody recognition mode.
Cell Host Microbe, 31, 2023
8E2R
DownloadVisualize
BU of 8e2r by Molmil
Crystal structure of TadAC-1.14
分子名称: GLYCEROL, ZINC ION, tRNA-specific adenosine deaminase 1.14
著者Feliciano, P.R, Lee, S.J, Ciaramella, G.
登録日2022-08-15
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Improved cytosine base editors generated from TadA variants.
Nat.Biotechnol., 41, 2023
8E2Q
DownloadVisualize
BU of 8e2q by Molmil
Crystal structure of TadAC-1.17 in a complex with ssDNA
分子名称: DNA (5'-D(P*GP*CP*GP*GP*CP*TP*(D8A)P*CP*GP*GP*A)-3'), GLYCEROL, ZINC ION, ...
著者Feliciano, P.R, Lee, S.J, Ciaramella, G.
登録日2022-08-15
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Improved cytosine base editors generated from TadA variants.
Nat.Biotechnol., 41, 2023
8E2O
DownloadVisualize
BU of 8e2o by Molmil
Leveraging the Structure of DNAJA1 to Discover Novel Pancreatic Cancer Therapies
分子名称: Isoform 2 of DnaJ homolog subfamily A member 1
著者Roth, H.E, Powers, R.
登録日2022-08-15
公開日2022-11-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Leveraging the Structure of DNAJA1 to Discover Novel Potential Pancreatic Cancer Therapies.
Biomolecules, 12, 2022
8E2N
DownloadVisualize
BU of 8e2n by Molmil
Crystal Structure of Nanobody VHH113 Specific for PA14 Cif
分子名称: Nanobody VHH113
著者Simard, A.R, Madden, D.R.
登録日2022-08-15
公開日2023-10-04
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystal Structure of Nanobody VHH113 Specific for PA14 Cif
To Be Published
8E2M
DownloadVisualize
BU of 8e2m by Molmil
Bruton's tyrosine kinase (BTK) with compound 13
分子名称: (5P)-5-[4-methyl-6-(2-methylpropyl)pyridin-3-yl]-4-oxo-N-[(1R,2S)-2-propanamidocyclopentyl]-4,5-dihydro-3H-1-thia-3,5,8-triazaacenaphthylene-2-carboxamide, TRIETHYLENE GLYCOL, Tyrosine-protein kinase BTK
著者Alexander, R, Milligan, C.M.
登録日2022-08-15
公開日2022-11-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.904 Å)
主引用文献Discovery of JNJ-64264681: A Potent and Selective Covalent Inhibitor of Bruton's Tyrosine Kinase.
J.Med.Chem., 65, 2022
8E2B
DownloadVisualize
BU of 8e2b by Molmil
N-terminal domain of S. aureus GpsB
分子名称: Cell cycle protein GpsB, GLYCEROL
著者Sacco, M, Chen, Y.
登録日2022-08-14
公開日2023-08-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Staphylococcus aureus FtsZ and PBP4 bind to the conformationally dynamic N-terminal domain of GpsB.
Elife, 13, 2024
8E26
DownloadVisualize
BU of 8e26 by Molmil
Crystal Structure of SARS-CoV-2 Main Protease N142S mutant in complex with Nirmatrelvir
分子名称: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE
著者Noske, G.D, Godoy, A.S, Oliva, G.
登録日2022-08-14
公開日2022-10-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.845 Å)
主引用文献Structural basis of nirmatrelvir and ensitrelvir activity against naturally occurring polymorphisms of the SARS-CoV-2 main protease.
J.Biol.Chem., 299, 2023
8E25
DownloadVisualize
BU of 8e25 by Molmil
Crystal Structure of SARS-CoV-2 Main Protease M49I mutant in complex with Nirmatrelvir
分子名称: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, DIMETHYL SULFOXIDE, Replicase polyprotein 1ab
著者Noske, G.D, Godoy, A.S, Oliva, G.
登録日2022-08-14
公開日2022-10-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.868 Å)
主引用文献Structural basis of nirmatrelvir and ensitrelvir activity against naturally occurring polymorphisms of the SARS-CoV-2 main protease.
J.Biol.Chem., 299, 2023
8E1Y
DownloadVisualize
BU of 8e1y by Molmil
Crystal Structure of SARS-CoV-2 Main protease A193S mutant in complex with Nirmatrelvir
分子名称: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE
著者Noske, G.D, Oliva, G, Godoy, A.S.
登録日2022-08-11
公開日2022-08-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structural basis of nirmatrelvir and ensitrelvir activity against naturally occurring polymorphisms of the SARS-CoV-2 main protease.
J.Biol.Chem., 299, 2023
8E1X
DownloadVisualize
BU of 8e1x by Molmil
FGFR2 kinase domain in complex with a Pyrazolo[1,5-a]pyrimidine analog (Compound 29)
分子名称: (5M)-N-methyl-5-{(6M,8S)-5-{[(3S)-oxolan-3-yl]amino}-6-[1-(propan-2-yl)-1H-pyrazol-3-yl]pyrazolo[1,5-a]pyrimidin-3-yl}pyridine-3-carboxamide, Fibroblast growth factor receptor 2
著者Lei, H.-T, Epling, L.B, Deller, M.C.
登録日2022-08-11
公開日2022-11-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Discovery of Potent and Selective Inhibitors of Wild-Type and Gatekeeper Mutant Fibroblast Growth Factor Receptor (FGFR) 2/3.
J.Med.Chem., 65, 2022
8E1W
DownloadVisualize
BU of 8e1w by Molmil
Neutron crystal structure of Panus similis AA9A at room temperature
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, COPPER (II) ION, ...
著者Meilleur, F, Tandrup, T, Lo Leggio, L.
登録日2022-08-11
公開日2023-01-11
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (2.1 Å), X-RAY DIFFRACTION
主引用文献Joint X-ray/neutron structure of Lentinus similis AA9_A at room temperature.
Acta Crystallogr.,Sect.F, 79, 2023

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon