PDB: 238582 件ウェブページステータス検索Chemie searchBIRD

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6TFQ	Structure in P3212 form of the PBP/SBP MoaA in complex with mannopinic acid from A.tumefacien R10 分子名称: (2~{R})-2-[[(3~{R},4~{R},5~{S})-3,4,5,6-tetrakis(oxidanyl)-2-oxidanylidene-hexyl]amino]pentanedioic acid, ABC transporter substrate-binding protein, CHLORIDE ION, ... 著者 Morera, S, Vigouroux, A. 登録日 2019-11-14 公開日 2020-01-22 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Import pathways of the mannityl-opines into the bacterial pathogen Agrobacterium tumefaciens: structural, affinity and in vivo approaches. Biochem.J., 477, 2020
9B5N	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - Ub(T) class 1 map and model from consensus 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-25 実験手法 ELECTRON MICROSCOPY (3.12 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
8HVT	Structure of the human CLC-7/Ostm1 complex reveals a novel state 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, H(+)/Cl(-) exchange transporter 7, Osteopetrosis-associated transmembrane protein 1, ... 著者 Zhang, Z.X, Chen, L, He, J, She, J. 登録日 2022-12-27 公開日 2024-01-03 最終更新日 2025-07-02 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure of the human CLC-7/Ostm1 complex reveals a novel state JUSTC, 53, 2023
5KC6	Crystal structure of Cbln1 (Val55-Gly58 deletion mutant) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cerebellin-1 著者 Elegheert, J, Clay, J.E, Aricescu, A.R. 登録日 2016-06-05 公開日 2016-07-27 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.801 Å) 主引用文献 Structural basis for integration of GluD receptors within synaptic organizer complexes. Science, 353, 2016
9B5U	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - Ub(T) class 1 map and model from cluster 1 (ATP/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-25 実験手法 ELECTRON MICROSCOPY (3.67 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
8HWK	Limosilactobacillus reuteri N1 GtfB-maltohexaose 分子名称: CITRIC ACID, DI(HYDROXYETHYL)ETHER, SODIUM ION, ... 著者 Dong, J.J, Bai, Y.X. 登録日 2022-12-30 公開日 2024-01-03 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Insights into the Structure-Function Relationship of GH70 GtfB alpha-Glucanotransferases from the Crystal Structure and Molecular Dynamic Simulation of a Newly Characterized Limosilactobacillus reuteri N1 GtfB Enzyme. J.Agric.Food Chem., 72, 2024
9B5R	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - cluster 3 map and model (ATP/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-25 実験手法 ELECTRON MICROSCOPY (2.95 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9B5L	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - Ub(T) class 10 map and model from cluster 5 (Ub(A)-AMP) 分子名称: 4-aminobutanenitrile, ADENOSINE MONOPHOSPHATE, Polyubiquitin, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-18 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9BD3	Structure of the MAGEA4 MHD-RAD18 R6BD Complex 分子名称: E3 ubiquitin-protein ligase RAD18, Melanoma antigen A 4 著者 Forker, K, Zhou, P. 登録日 2024-04-10 公開日 2024-06-05 最終更新日 2024-07-24 実験手法 X-RAY DIFFRACTION (2.58 Å) 主引用文献 Crystal structure of MAGEA4 MHD-RAD18 R6BD reveals a flipped binding mode compared to AlphaFold2 prediction. Embo J., 43, 2024
2IT6	Crystal Structure of DCSIGN-CRD with man2 分子名称: CALCIUM ION, CD209 antigen, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose 著者 Weis, W.I, Feinberg, H, Castelli, R, Drickamer, K, Seeberger, P.H. 登録日 2006-10-19 公開日 2006-12-05 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Multiple modes of binding enhance the affinity of DC-SIGN for high mannose N-linked glycans found on viral glycoproteins. J.Biol.Chem., 282, 2007
5KCQ	Crystal structure of the aromatic prenyltransferase AtaPT from Aspergillus terreus A8-4 in complex with geranyl S-thiolodiphosphate 分子名称: GERANYL S-THIOLODIPHOSPHATE, aromatic prenyltransferase 著者 Sun, F, Gao, B. 登録日 2016-06-06 公開日 2016-12-21 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Molecular insights into the enzyme promiscuity of an aromatic prenyltransferase. Nat. Chem. Biol., 13, 2017
2ITF	Crystal structure IsdA NEAT domain from Staphylococcus aureus with heme bound 分子名称: Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE 著者 Grigg, J.C, Vermeiren, C.L, Heinrichs, D.E, Murphy, M.E. 登録日 2006-10-19 公開日 2006-12-26 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Haem recognition by a Staphylococcus aureus NEAT domain. Mol.Microbiol., 63, 2007
5KD1	Sperm whale myoglobin H64A with nitrosoamphetamine 分子名称: GLYCEROL, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Wang, B, Guan, Y, Thomas, L.M, Richter-Addo, G.B. 登録日 2016-06-07 公開日 2017-05-10 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Nitrosoamphetamine binding to myoglobin and hemoglobin: Crystal structure of the H64A myoglobin-nitrosoamphetamine adduct. Nitric Oxide, 67, 2017
9B5F	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 1 map and model (Ub(A)/ATP/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-18 実験手法 ELECTRON MICROSCOPY (2.78 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9BB3	Backbone Modification in the GA Module of Protein PAB: beta3-residues at positions 22 and 26 分子名称: Peptostreptococcal albumin-binding protein 著者 Lin, Y, Horne, W.S. 登録日 2024-04-05 公開日 2024-06-05 最終更新日 2024-08-21 実験手法 SOLUTION NMR 主引用文献 Backbone Modification in a Protein Hydrophobic Core. Chemistry, 30, 2024
8HW3	Limosilactobacillus reuteri N1 GtfB-acarbose 分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, GLYCEROL, SODIUM ION, ... 著者 Dong, J.J, Bai, Y.X. 登録日 2022-12-28 公開日 2024-01-03 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.66 Å) 主引用文献 Insights into the Structure-Function Relationship of GH70 GtfB alpha-Glucanotransferases from the Crystal Structure and Molecular Dynamic Simulation of a Newly Characterized Limosilactobacillus reuteri N1 GtfB Enzyme. J.Agric.Food Chem., 72, 2024
9B5A	Ubiquitin E2-Ub-E3 HECT tetrahedral transthiolation intermediate mimic - state 6 分子名称: 4-aminobutanenitrile, E3 ubiquitin-protein ligase pub2, Ubiquitin, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-18 実験手法 ELECTRON MICROSCOPY (3.65 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
5K5T	Crystal structure of the inactive form of human calcium-sensing receptor extracellular domain 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Extracellular calcium-sensing receptor, ... 著者 Geng, Y, Mosyak, L, Kurinov, I, Zuo, H, Sturchler, E, Cheng, T.C, Subramanyam, P, Brown, A.P, Brennan, S.C, Mun, H.-C, Bush, M, Chen, Y, Nguyen, T, Cao, B, Chang, D, Quick, M, Conigrave, A, Colecraft, H.M, McDonald, P, Fan, Q.R. 登録日 2016-05-23 公開日 2016-08-03 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural mechanism of ligand activation in human calcium-sensing receptor. Elife, 5, 2016
9B5H	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 3 map and model (Ub(A)-AMP/PPi/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE MONOPHOSPHATE, Large ribosomal subunit protein eL40B, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-18 実験手法 ELECTRON MICROSCOPY (2.69 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9B5I	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 4 map and model (Ub(A)-AMP/PPi/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-18 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
9B5Q	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - cluster 2 map and model (ATP/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-25 実験手法 ELECTRON MICROSCOPY (2.95 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
8I5K	Crystal structure of chitin oligosaccharide binding protein from Vibrio cholera in complex with chitotriose. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ABC transporter substrate-binding protein, MAGNESIUM ION 著者 Ohnuma, T, Takeshita, D. 登録日 2023-01-25 公開日 2024-01-03 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.219 Å) 主引用文献 Periplasmic chitooligosaccharide-binding protein requires a three-domain organization for substrate translocation. Sci Rep, 13, 2023
9B5S	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - cluster 4 map and model (ATP/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 最終更新日 2024-09-25 実験手法 ELECTRON MICROSCOPY (2.96 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway. Nature, 633, 2024
1LNL	Structure of deoxygenated hemocyanin from Rapana thomasiana 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, hemocyanin 著者 Perbandt, M, Guthoehrlein, E.W, Rypniewski, W, Idakieva, K, Stoeva, S, Voelter, W, Genov, N, Betzel, C. 登録日 2002-05-03 公開日 2003-06-03 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 The structure of a functional unit from the wall of a gastropod hemocyanin offers a possible mechanism for cooperativity Biochemistry, 42, 2003
9BKF	Crystal structure of selenomethionine labeled bovine trypsin mutant - S195A solved by Sulphur-SAD at 1A wavelength 分子名称: Serine protease 1 著者 Zhou, D, Chen, L, Rose, J.P, Wang, B.C. 登録日 2024-04-27 公開日 2024-06-05 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Crystal structure of selenomethionine labeled bovine trypsin mutant - S195A solved by Sulphur-SAD at 1A wavelength To Be Published

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