Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6AGN
DownloadVisualize
BU of 6agn by Molmil
Structure of HEWL co-crystallised with Cinnamaldehyde
分子名称: (2E)-3-phenylprop-2-enal, (2Z)-3-phenylprop-2-enal, 1,2-ETHANEDIOL, ...
著者Seyedarabi, A, Seraj, Z.
登録日2018-08-13
公開日2019-08-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献The role of Cinnamaldehyde and Phenyl ethyl alcohol as two types of precipitants affecting protein hydration levels.
Int.J.Biol.Macromol., 146, 2019
6E5A
DownloadVisualize
BU of 6e5a by Molmil
PPARg in complex with compound 4b
分子名称: (5Z)-5-({4-[(prop-2-yn-1-yl)oxy]phenyl}methylidene)-2-sulfanylidene-1,3-thiazolidin-4-one, Peroxisome proliferator-activated receptor gamma
著者Bruning, J.B, Chua, B.S.K.
登録日2018-07-19
公開日2019-03-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Shooting three inflammatory targets with a single bullet: Novel multi-targeting anti-inflammatory glitazones.
Eur J Med Chem, 167, 2019
6E63
DownloadVisualize
BU of 6e63 by Molmil
Crystal structure of malaria transmission-blocking antigen Pfs48/45 6C in complex with antibody TB31F
分子名称: GLYCEROL, Pf48/45, TB31F Fab heavy chain, ...
著者Kundu, P, Semesi, A, Julien, J.P.
登録日2018-07-23
公開日2018-11-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural delineation of potent transmission-blocking epitope I on malaria antigen Pfs48/45.
Nat Commun, 9, 2018
6RIV
DownloadVisualize
BU of 6riv by Molmil
Crystal structure of Alopecurus myosuroides GSTF
分子名称: GLYCEROL, Glutathione transferase, S-Hydroxy-Glutathione, ...
著者Papageorgiou, A.C, Poudel, N.
登録日2019-04-25
公開日2020-03-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Comparative structural and functional analysis of phi class glutathione transferases involved in multiple-herbicide resistance of grass weeds and crops.
Plant Physiol Biochem., 149, 2020
6RTA
DownloadVisualize
BU of 6rta by Molmil
Tetragonal lysozyme grown with 300g/L Ficoll
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Pereira, P.J.B, Ferreira, C, Martins, P.M.
登録日2019-05-22
公開日2019-06-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Protein crystals as a key for deciphering macromolecular crowding effects on biological reactions.
Phys Chem Chem Phys, 22, 2020
5ILB
DownloadVisualize
BU of 5ilb by Molmil
Crystal structure of protease domain of Deg2 linked with the PDZ domain of Deg9
分子名称: Protease Do-like 2, chloroplastic,Protease Do-like 9
著者Ouyang, M, Liu, L, Li, X.Y, Zhao, S, Zhang, L.X.
登録日2016-03-04
公開日2017-03-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.852 Å)
主引用文献The crystal structure of Deg9 reveals a novel octameric-type HtrA protease
Nat Plants, 3, 2017
6RT9
DownloadVisualize
BU of 6rt9 by Molmil
Orthorhombic lysozyme grown with 300g/L sucrose
分子名称: CHLORIDE ION, Lysozyme C, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
著者Pereira, P.J.B, Ferreira, C, Martins, P.M.
登録日2019-05-22
公開日2019-06-05
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Protein crystals as a key for deciphering macromolecular crowding effects on biological reactions.
Phys Chem Chem Phys, 22, 2020
6EE7
DownloadVisualize
BU of 6ee7 by Molmil
Small tetraheme cytochrome c from Shewanella oneidensis
分子名称: HEME C, Periplasmic tetraheme cytochrome c CctA, ZINC ION
著者Huang, J, Zarzycki, J, Ducat, D.C, Kramer, D.M.
登録日2018-08-13
公開日2019-08-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.394 Å)
主引用文献Mesoscopic to Macroscopic Electron Transfer by Hopping in a Crystal Network of Cytochromes.
J.Am.Chem.Soc., 142, 2020
6EJ2
DownloadVisualize
BU of 6ej2 by Molmil
BACE1 compound 28
分子名称: Beta-secretase 1, compound 28
著者Johansson, P.
登録日2017-09-20
公開日2018-04-18
最終更新日2018-05-09
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Toward beta-Secretase-1 Inhibitors with Improved Isoform Selectivity.
J. Med. Chem., 61, 2018
6S1S
DownloadVisualize
BU of 6s1s by Molmil
Crystal structure of AmpC from Pseudomonas aeruginosa in complex with [3-(2-carboxyvinyl)phenyl]boronic acid] inhibitor
分子名称: (~{E})-3-[3-(dihydroxyboranyl)phenyl]prop-2-enoic acid, Beta-lactamase, PHOSPHATE ION
著者Kekez, I, Vicario, M, Bellio, P, Tosoni, E, Celenza, G, Blazquez, J, Tondi, D, Cendron, L.
登録日2019-06-19
公開日2019-10-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Phenylboronic Acids Probing Molecular Recognition against Class A and Class C beta-lactamases.
Antibiotics, 8, 2019
6E64
DownloadVisualize
BU of 6e64 by Molmil
Crystal structure of malaria transmission-blocking antibody 85RF45.1
分子名称: 85RF45.1 Fab heavy chain, 85RF45.1 Fab light chain
著者Kundu, P, Semesi, A, Julien, J.P.
登録日2018-07-23
公開日2018-11-28
最終更新日2018-12-05
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural delineation of potent transmission-blocking epitope I on malaria antigen Pfs48/45.
Nat Commun, 9, 2018
4HU1
DownloadVisualize
BU of 4hu1 by Molmil
Crystal structure of human carbonic anhydrase isozyme XIII with the inhibitor.
分子名称: 1,2-ETHANEDIOL, 2,3,5,6-tetrafluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide, Carbonic anhydrase 13, ...
著者Smirnov, A, Manakova, E, Grazulis, S.
登録日2012-11-02
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献4-Substituted-2,3,5,6-tetrafluorobenzenesulfonamides as inhibitors of carbonic anhydrases I, II, VII, XII, and XIII.
Bioorg.Med.Chem., 21, 2013
6RRO
DownloadVisualize
BU of 6rro by Molmil
Solution NMR structure of the peptide 536_2 from medicinal leech Hirudo medicinalis in dodecylphosphocholine micelles
分子名称: peptide 536_2
著者Nadezhdin, K.D, Grafskaia, E.N, Arseniev, A.S, Lazarev, V.N.
登録日2019-05-20
公開日2019-07-24
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Medicinal leech antimicrobial peptides lacking toxicity represent a promising alternative strategy to combat antibiotic-resistant pathogens.
Eur.J.Med.Chem., 180, 2019
5IF6
DownloadVisualize
BU of 5if6 by Molmil
Structure of a computationally designed 17-OHP binder
分子名称: (9beta)-17-hydroxypregn-4-ene-3,20-dione, OHP9_1c, SODIUM ION
著者Stoddard, B.L, Doyle, L.A.
登録日2016-02-25
公開日2017-03-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Sampling and energy evaluation challenges in ligand binding protein design.
Protein Sci., 26, 2017
6RRL
DownloadVisualize
BU of 6rrl by Molmil
Solution NMR structure of the peptide 3967 from medicinal leech Hirudo medicinalis in dodecylphosphocholine micelles
分子名称: peptide 3967
著者Nadezhdin, K.D, Grafskaia, E.N, Arseniev, A.S, Lazarev, V.N.
登録日2019-05-20
公開日2019-07-24
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Medicinal leech antimicrobial peptides lacking toxicity represent a promising alternative strategy to combat antibiotic-resistant pathogens.
Eur.J.Med.Chem., 180, 2019
6EJ3
DownloadVisualize
BU of 6ej3 by Molmil
BACE1 compound 23
分子名称: (1r,4r)-4-methoxy-6'-(5-methyl-3-pyridinyl)-3'H-dispiro[cyclohexane-1,2'-indene-1',4''-[1,3]oxazol]-2''-amine, Beta-secretase 1
著者Johansson, P.
登録日2017-09-20
公開日2018-04-18
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Toward beta-Secretase-1 Inhibitors with Improved Isoform Selectivity.
J. Med. Chem., 61, 2018
6RSM
DownloadVisualize
BU of 6rsm by Molmil
Solution NMR structure of the peptide 12530 from medicinal leech Hirudo medicinalis in dodecylphosphocholine micelles
分子名称: peptide 12530
著者Talyzina, I.A, Nadezhdin, K.D, Grafskaia, E.N, Arseniev, A.S, Lazarev, V.N.
登録日2019-05-21
公開日2019-07-24
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Medicinal leech antimicrobial peptides lacking toxicity represent a promising alternative strategy to combat antibiotic-resistant pathogens.
Eur.J.Med.Chem., 180, 2019
6SDT
DownloadVisualize
BU of 6sdt by Molmil
HUMAN CARBONIC ANHYDRASE VII IN COMPLEX WITH A SULFONAMIDE INHIBITOR
分子名称: Carbonic anhydrase 7, ZINC ION, phenyl-(4-sulfamoylphenoxy)phosphinic acid
著者Alterio, V, De Simone, G, Esposito, D.
登録日2019-07-29
公開日2020-06-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Phenyl(thio)phosphon(amid)ate Benzenesulfonamides as Potent and Selective Inhibitors of Human Carbonic Anhydrases II and VII Counteract Allodynia in a Mouse Model of Oxaliplatin-Induced Neuropathy.
J.Med.Chem., 63, 2020
4HT0
DownloadVisualize
BU of 4ht0 by Molmil
Crystal structure of human carbonic anhydrase isozyme II with the inhibitor.
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-[(4,6-dimethylpyrimidin-2-yl)thio]-2,3,5,6-tetrafluorobenzenesulfonamide, Carbonic anhydrase 2, ...
著者Smirnov, A, Manakova, E, Grazulis, S.
登録日2012-10-31
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献4-Substituted-2,3,5,6-tetrafluorobenzenesulfonamides as inhibitors of carbonic anhydrases I, II, VII, XII, and XIII.
Bioorg.Med.Chem., 21, 2013
4HT2
DownloadVisualize
BU of 4ht2 by Molmil
Crystal structure of human carbonic anhydrase isozyme XII with the inhibitor.
分子名称: 1,2-ETHANEDIOL, 4-[(4,6-dimethylpyrimidin-2-yl)thio]-2,3,5,6-tetrafluorobenzenesulfonamide, Carbonic anhydrase 12, ...
著者Smirnov, A, Manakova, E, Grazulis, S.
登録日2012-10-31
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献4-Substituted-2,3,5,6-tetrafluorobenzenesulfonamides as inhibitors of carbonic anhydrases I, II, VII, XII, and XIII.
Bioorg.Med.Chem., 21, 2013
5IFK
DownloadVisualize
BU of 5ifk by Molmil
Purine nucleoside phosphorylase
分子名称: HYPOXANTHINE, Purine nucleoside phosphorylase
著者Thakur, K.G, Priyanka, A.
登録日2016-02-26
公開日2017-03-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.967 Å)
主引用文献Functional and Structural Characterization of Purine Nucleoside Phosphorylase from Kluyveromyces lactis and Its Potential Applications in Reducing Purine Content in Food
PLoS ONE, 11, 2016
6SDG
DownloadVisualize
BU of 6sdg by Molmil
Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with High Affinity DNA
分子名称: 21-7_A, 21-7_B, Auxin response factor
著者Crespo, I, Weijers, D, Boer, D.R.
登録日2019-07-27
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Design principles of a minimal auxin response system.
Nat.Plants, 6, 2020
5IL9
DownloadVisualize
BU of 5il9 by Molmil
Crystal structure of Deg9
分子名称: GLYCEROL, Protease Do-like 9
著者Ouyang, M, Liu, L, Li, X.Y, Zhao, S, Zhang, L.X.
登録日2016-03-04
公開日2017-03-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of Deg9 reveals a novel octameric-type HtrA protease
Nat Plants, 3, 2017
4I7J
DownloadVisualize
BU of 4i7j by Molmil
T4 Lysozyme L99A/M102H with benzene bound
分子名称: 2-HYDROXYETHYL DISULFIDE, ACETATE ION, BENZENE, ...
著者Merski, M, Shoichet, B.K.
登録日2012-11-30
公開日2013-03-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献The impact of introducing a histidine into an apolar cavity site on docking and ligand recognition.
J.Med.Chem., 56, 2013
6EKS
DownloadVisualize
BU of 6eks by Molmil
Vibrio cholerae neuraminidase complexed with oseltamivir carboxylate
分子名称: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, CALCIUM ION, GLYCEROL, ...
著者Schuetz, A, Heinemann, U.
登録日2017-09-27
公開日2017-11-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Different Inhibitory Potencies of Oseltamivir Carboxylate, Zanamivir, and Several Tannins on Bacterial and Viral Neuraminidases as Assessed in a Cell-Free Fluorescence-Based Enzyme Inhibition Assay.
Molecules, 22, 2017

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon