PDB: 175 件ウェブページステータス検索Chemie searchBIRD

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6TEC	Crystal Structure of full-length Human Lysyl Hydroxylase LH3 - Cocrystal with Fe2+, Mn2+, UDP-Xylose 分子名称: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Chiapparino, A, De Giorgi, F, Scietti, L, Faravelli, S, Roscioli, T, Forneris, F. 登録日 2019-11-11 公開日 2021-05-19 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Identification of Regulatory Molecular 'Hot Spots' for LH/PLOD Collagen Glycosyltransferase Activity Int J Mol Sci, 2023
6TES	Crystal Structure of full-length Human Lysyl Hydroxylase LH3 - Cocrystal with Fe2+, Mn2+, UDP-Glucuronic Acid 分子名称: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Chiapparino, A, De Giorgi, F, Scietti, L, Faravelli, S, Roscioli, T, Forneris, F. 登録日 2019-11-12 公開日 2021-05-19 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Identification of Regulatory Molecular 'Hot Spots' for LH/PLOD Collagen Glycosyltransferase Activity Int J Mol Sci, 2023
6TEU	Crystal Structure of full-length Human Lysyl Hydroxylase LH3 - Val80Lys mutant - Cocrystal with Fe2+, Mn2+ 分子名称: 2-OXOGLUTARIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Chiapparino, A, De Giorgi, F, Scietti, L, Faravelli, S, Roscioli, T, Forneris, F. 登録日 2019-11-12 公開日 2021-05-19 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Identification of Regulatory Molecular 'Hot Spots' for LH/PLOD Collagen Glycosyltransferase Activity Int J Mol Sci, 2023
6TEZ	Crystal Structure of full-length Human Lysyl Hydroxylase LH3 - Val80Lys mutant - Cocrystal with Fe2+, Mn2+, UDP-Glucuronic Acid 分子名称: 2-OXOGLUTARIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Chiapparino, A, De Giorgi, F, Scietti, L, Faravelli, S, Roscioli, T, Forneris, F. 登録日 2019-11-12 公開日 2021-05-19 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Identification of Regulatory Molecular 'Hot Spots' for LH/PLOD Collagen Glycosyltransferase Activity Int J Mol Sci, 2023
1RXF	DEACETOXYCEPHALOSPORIN C SYNTHASE COMPLEXED WITH FE(II) 分子名称: DEACETOXYCEPHALOSPORIN C SYNTHASE, FE (III) ION 著者 Valegard, K, Terwisscha Van Scheltinga, A.C, Lloyd, M.D, Hara, T, Ramaswamy, S, Perrakis, A, Thompson, A, Lee, H.J, Baldwin, J.E, Schofield, C.J, Hajdu, J, Andersson, I. 登録日 1998-06-05 公開日 1999-06-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure of a cephalosporin synthase. Nature, 394, 1998
1UOG	Deacetoxycephalosporin C synthase complexed with deacetoxycephalosporin C 分子名称: DEACETOXYCEPHALOSPORIN C SYNTHETASE, DEACETOXYCEPHALOSPORIN-C, FE (II) ION 著者 Valegard, K, Terwisscha van Scheltinga, A.C, Dubus, A, Oster, L.M, Rhangino, G, Hajdu, J, Andersson, I. 登録日 2003-09-17 公開日 2004-01-09 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Structural Basis of Cephalosporin Formation in a Mononuclear Ferrous Enzyme Nat.Struct.Mol.Biol., 11, 2004
1UO9	Deacetoxycephalosporin C synthase complexed with succinate 分子名称: DEACETOXYCEPHALOSPORIN C SYNTHETASE, FE (II) ION, SUCCINIC ACID 著者 Valegard, K, Terwisscha Van scheltinga, A.C, Dubus, A, Oster, L.M, Rhangino, G, Hajdu, J, Andersson, I. 登録日 2003-09-16 公開日 2004-01-08 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 The Structural Basis of Cephalosporin Formation in a Mononuclear Ferrous Enzyme Nat.Struct.Mol.Biol., 11, 2004
1UNB	Deacetoxycephalosporin C synthase complexed with 2-oxoglutarate and ampicillin 分子名称: (2S,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID, 2-OXOGLUTARIC ACID, DEACETOXYCEPHALOSPORIN C SYNTHETASE, ... 著者 Valegard, K, Terwisscha van Scheltinga, A.C, Dubus, A, Oster, L.M, Rhangino, G, Hajdu, J, Andersson, I. 登録日 2003-09-09 公開日 2004-01-09 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 The Structural Basis of Cephalosporin Formation in a Mononuclear Ferrous Enzyme Nat.Struct.Mol.Biol., 11, 2004
1UOF	Deacetoxycephalosporin C synthase complexed with Penicillin G 分子名称: DEACETOXYCEPHALOSPORIN C SYNTHETASE, FE (II) ION, PENICILLIN G 著者 Valegard, K, Terwisscha Van scheltinga, A.C, Dubus, A, Oster, L.M, Rhangino, G, Hajdu, J, Andersson, I. 登録日 2003-09-16 公開日 2004-01-09 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The Structural Basis of Cephalosporin Formation in a Mononuclear Ferrous Enzyme Nat.Struct.Mol.Biol., 11, 2004
1RXG	DEACETOXYCEPHALOSPORIN C SYNTHASE COMPLEXED WITH FE(II) AND 2-OXOGLUTARATE 分子名称: 2-OXOGLUTARIC ACID, DEACETOXYCEPHALOSPORIN C SYNTHASE, FE (III) ION, ... 著者 Valegard, K, Terwisscha Van Scheltinga, A.C, Lloyd, M.D, Hara, T, Ramaswamy, S, Perrakis, A, Thompson, A, Lee, H.J, Baldwin, J.E, Shofield, C.J, Hajdu, J, Andersson, I. 登録日 1998-06-05 公開日 1999-06-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure of a cephalosporin synthase. Nature, 394, 1998
1W2O	Deacetoxycephalosporin C synthase (with a N-terminal his-tag) in complex with Fe(II) and deacetoxycephalosporin C 分子名称: DEACETOXYCEPHALOSPORIN C SYNTHASE, DEACETOXYCEPHALOSPORIN-C, FE (III) ION 著者 Oster, L.M, Terwisscha Van Scheltinga, A.C, Valegard, K, Mackenzie Hose, A, Dubus, A, Hajdu, J, Andersson, I. 登録日 2004-07-07 公開日 2004-09-30 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Conformational Flexibility of the C Terminus with Implications for Substrate Binding and Catalysis Revealed in a New Crystal Form of Deacetoxycephalosporin C Synthase J.Mol.Biol., 343, 2004
1W2N	Deacetoxycephalosporin C synthase (with a N-terminal his-tag) in complex with Fe(II) and ampicillin 分子名称: (2S,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID, DEACETOXYCEPHALOSPORIN C SYNTHASE, FE (III) ION 著者 Oster, L.M, Terwisscha Van Scheltinga, A.C, Valegard, K, Mackenzie Hose, A, Dubus, A, Hajdu, J, Andersson, I. 登録日 2004-07-07 公開日 2004-09-30 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Conformational Flexibility of the C Terminus with Implications for Substrate Binding and Catalysis Revealed in a New Crystal Form of Deacetoxycephalosporin C Synthase J.Mol.Biol., 343, 2004
1UOB	Deacetoxycephalosporin C synthase complexed with 2-oxoglutarate and penicillin G 分子名称: 2-OXOGLUTARIC ACID, DEACETOXYCEPHALOSPORIN C SYNTHETASE, FE (II) ION, ... 著者 Valegard, K, Terwisscha van Scheltinga, A.C, Dubus, A, Oster, L.M, Rhangino, G, Hajdu, J, Andersson, I. 登録日 2003-09-16 公開日 2004-01-09 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Structural Basis of Cephalosporin Formation in a Mononuclear Ferrous Enzyme Nat.Struct.Mol.Biol., 11, 2004
1W2A	Deacetoxycephalosporin C synthase (with his-tag) complexed with Fe(II) and ethylene glycol 分子名称: 1,2-ETHANEDIOL, DEACETOXYCEPHALOSPORIN C SYNTHASE, FE (III) ION 著者 Oster, L.M, Terwisscha Van Scheltinga, A.C, Valegard, K, Mackenzie Hose, A, Dubus, A, Hajdu, J, Andersson, I. 登録日 2004-07-01 公開日 2004-09-30 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Conformational Flexibility of the C Terminus with Implications for Substrate Binding and Catalysis Revealed in a New Crystal Form of Deacetoxycephalosporin C Synthase J.Mol.Biol., 343, 2004
8Y4U	Crystal structure of a His1 from oryza sativa 分子名称: FE (III) ION, Fe(II)/2-oxoglutarate-dependent oxygenase 著者 Wang, N, Ma, J.M, Shibing, H, Beibei, Y, He, Z, Dandan, L. 登録日 2024-01-30 公開日 2024-02-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of HPPD inhibitor sensitive protein from Oryza sativa. Biochem.Biophys.Res.Commun., 704, 2024
6KWB	AtDAO1(dioxygenase for auxin oxidation 1 from Arabidopsis thaliana) - 2-oxoglutarate binray complex 分子名称: 2-OXOGLUTARIC ACID, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, MAGNESIUM ION 著者 Rhee, S, Jin, S, Lee, H. 登録日 2019-09-06 公開日 2020-11-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.5183928 Å) 主引用文献 Crystal structure of the indole-3-acetic acid-catabolizing enzyme DAO1 from Arabidopsis thaliana. J.Struct.Biol., 212, 2020
8ETN	The X-ray Crystal Structure of Tri-Ketone Dioxygenase from Rice 分子名称: Tri-Ketone Dioxygenase 著者 Rydel, T.J, Duda, D, Zheng, M, Duff, S.M.G. 登録日 2022-10-17 公開日 2023-12-06 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.16 Å) 主引用文献 Structural and functional characterization of triketone dioxygenase from Oryza Sativa. Biochim Biophys Acta Gen Subj, 1868, 2023
6LSV	Crystal structure of JOX2 in complex with 2OG, Fe, and JA 分子名称: 2-OXOGLUTARIC ACID, FE (III) ION, Probable 2-oxoglutarate-dependent dioxygenase At5g05600, ... 著者 Zhang, X, Wang, D, Liu, J. 登録日 2020-01-20 公開日 2021-02-10 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.651 Å) 主引用文献 Structure-guided analysis of Arabidopsis JASMONATE-INDUCED OXYGENASE (JOX) 2 reveals key residues for recognition of jasmonic acid substrate by plant JOXs. Mol Plant, 14, 2021
4BB3	Isopenicillin N synthase with the dipeptide substrate analogue AhC 分子名称: (2S)-2-azanyl-6-oxidanylidene-6-[[(2S)-1-oxidanyl-1-oxidanylidene-4-sulfanyl-butan-2-yl]amino]hexanoic acid, FE (III) ION, ISOPENICILLIN N SYNTHASE, ... 著者 Daruzzaman, A, Clifton, I.J, Rutledge, P.J. 登録日 2012-09-19 公開日 2013-04-17 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 The Crystal Structure of Isopenicillin N Synthase with a Dipeptide Substrate Analogue. Arch.Biochem.Biophys., 530, 2013
8UC2	Ethylene forming enzyme (EFE) R171A variant in complex with nickel and Benzoic acid 分子名称: 1,2-ETHANEDIOL, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, BENZOIC ACID, ... 著者 Chatterjee, S, Rankin, J.A, Hu, J, Hausinger, R. 登録日 2023-09-25 公開日 2023-10-04 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural, Spectroscopic, and Computational Insights from Canavanine-Bound and Two Catalytically Compromised Variants of the Ethylene-Forming Enzyme. Biochemistry, 63, 2024
4XAE	Structure of Feruloyl-CoA 6-hydroxylase (F6H) from Arabidopsis thaliana 分子名称: Feruloyl CoA ortho-hydroxylase 1, SODIUM ION 著者 Zhou, D, Kandavelu, P, Zhang, H, Wang, B.C, Rose, J, Yan, Y. 登録日 2014-12-14 公開日 2015-06-10 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.769 Å) 主引用文献 Structural Insights into Substrate Specificity of Feruloyl-CoA 6'-Hydroxylase from Arabidopsis thaliana. Sci Rep, 5, 2015
5GJA	Crystal structure of Arabidopsis thaliana ACO2 in complex with 2-PA 分子名称: 1-aminocyclopropane-1-carboxylate oxidase 2, PYRIDINE-2-CARBOXYLIC ACID, ZINC ION 著者 Sun, X.Z, Li, Y.X, He, W.R, Ji, C.G, Xia, P.X, Wang, Y.C, Du, S, Li, H.J, Raikhel, N, Xiao, J.Y, Guo, H.W. 登録日 2016-06-28 公開日 2017-05-10 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Pyrazinamide and derivatives block ethylene biosynthesis by inhibiting ACC oxidase. Nat Commun, 8, 2017
6CF3	Ethylene forming enzyme Y306A variant in complex with manganese and 2-oxoglutarate 分子名称: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, ... 著者 Fellner, M, Martinez, S, Hu, J, Hausinger, R.P. 登録日 2018-02-13 公開日 2019-02-13 最終更新日 2024-04-17 実験手法 X-RAY DIFFRACTION (1.12 Å) 主引用文献 Structural, Spectroscopic, and Computational Insights from Canavanine-Bound and Two Catalytically Compromised Variants of the Ethylene-Forming Enzyme. Biochemistry, 2024
6CBA	Ethylene forming enzyme in complex with manganese, 2-oxoglutarate and canavanine 分子名称: 2-OXOGLUTARIC ACID, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, L-CANAVANINE, ... 著者 Fellner, M, Martinez, S, Hu, J, Hausinger, R.P. 登録日 2018-02-02 公開日 2019-02-06 最終更新日 2024-04-17 実験手法 X-RAY DIFFRACTION (1.13 Å) 主引用文献 Structural, Spectroscopic, and Computational Insights from Canavanine-Bound and Two Catalytically Compromised Variants of the Ethylene-Forming Enzyme. Biochemistry, 2024
6VP5	Ethylene forming enzyme (EFE) D191E variant in complex with Fe(II), L-arginine, and 2OG 分子名称: 2-OXOGLUTARIC ACID, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, ... 著者 Davis, K.M, Copeland, R.A, Boal, A.K. 登録日 2020-02-01 公開日 2021-02-03 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 An Iron(IV)-Oxo Intermediate Initiating l-Arginine Oxidation but Not Ethylene Production by the 2-Oxoglutarate-Dependent Oxygenase, Ethylene-Forming Enzyme. J.Am.Chem.Soc., 143, 2021

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