7Y4P
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![BU of 7y4p by Molmil](/molmil-images/mine/7y4p) | Human Plexin A1, extracellular domains 1-4 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A1 | 著者 | Tanaka, T, Neyazaki, M, Nogi, T. | 登録日 | 2022-06-15 | 公開日 | 2022-10-19 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3.5 Å) | 主引用文献 | Hybrid in vitro/in silico analysis of low-affinity protein-protein interactions that regulate signal transduction by Sema6D. Protein Sci., 31, 2022
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7Y4O
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![BU of 7y4o by Molmil](/molmil-images/mine/7y4o) | Rat Semaphorin 6D extracellular region | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Semaphorin 6D | 著者 | Tanaka, T, Neyazaki, M, Nogi, T. | 登録日 | 2022-06-15 | 公開日 | 2022-10-19 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Hybrid in vitro/in silico analysis of low-affinity protein-protein interactions that regulate signal transduction by Sema6D. Protein Sci., 31, 2022
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3NVN
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![BU of 3nvn by Molmil](/molmil-images/mine/3nvn) | Molecular mechanism of guidance cue recognition | 分子名称: | 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | 著者 | Liu, H, Juo, Z, Shim, A, Focia, P, Chen, X, Garcia, C, He, X. | 登録日 | 2010-07-08 | 公開日 | 2010-09-15 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.26 Å) | 主引用文献 | Structural Basis of Semaphorin-Plexin Recognition and Viral Mimicry from Sema7A and A39R Complexes with PlexinC1. Cell(Cambridge,Mass.), 142, 2010
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3NVQ
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![BU of 3nvq by Molmil](/molmil-images/mine/3nvq) | Molecular mechanism of guidance cue recognition | 分子名称: | 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-C1, ... | 著者 | Juo, Z, Liu, H, Shim, A, Focia, P, Chen, X, Garcia, C, He, X. | 登録日 | 2010-07-08 | 公開日 | 2010-09-15 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structural Basis of Semaphorin-Plexin Recognition and Viral Mimicry from Sema7A and A39R Complexes with PlexinC1. Cell(Cambridge,Mass.), 142, 2010
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3OKT
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![BU of 3okt by Molmil](/molmil-images/mine/3okt) | Mouse Plexin A2, extracellular domains 1-4 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ... | 著者 | Janssen, B.J.C, Robinson, R.A, Bell, C.H, Siebold, C, Jones, E.Y. | 登録日 | 2010-08-25 | 公開日 | 2010-10-13 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.296 Å) | 主引用文献 | Structural basis of semaphorin-plexin signalling. Nature, 467, 2010
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3OKW
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![BU of 3okw by Molmil](/molmil-images/mine/3okw) | Mouse Semaphorin 6A, extracellular domains 1-2 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, ... | 著者 | Janssen, B.J.C, Robinson, R.A, Bell, C.H, Siebold, C, Jones, E.Y. | 登録日 | 2010-08-25 | 公開日 | 2010-10-13 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.299 Å) | 主引用文献 | Structural basis of semaphorin-plexin signalling. Nature, 467, 2010
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3OKY
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![BU of 3oky by Molmil](/molmil-images/mine/3oky) | Plexin A2 in complex with Semaphorin 6A | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ... | 著者 | Janssen, B.J.C, Robinson, R.A, Bell, C.H, Siebold, C, Jones, E.Y. | 登録日 | 2010-08-25 | 公開日 | 2010-10-13 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.195 Å) | 主引用文献 | Structural basis of semaphorin-plexin signalling. Nature, 467, 2010
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5L5N
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![BU of 5l5n by Molmil](/molmil-images/mine/5l5n) | Plexin A4 full extracellular region, domains 1 to 7 modeled, data to 8.5 angstrom, spacegroup P4(3)22 | 分子名称: | Plexin-A4 | 著者 | Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y. | 登録日 | 2016-05-28 | 公開日 | 2016-07-06 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (8.502 Å) | 主引用文献 | Structural Basis for Plexin Activation and Regulation. Neuron, 91, 2016
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5L5G
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![BU of 5l5g by Molmil](/molmil-images/mine/5l5g) | Plexin A2 full extracellular region, domains 1 to 8 modeled, data to 10 angstrom | 分子名称: | Plexin-A2 | 著者 | Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y. | 登録日 | 2016-05-28 | 公開日 | 2016-07-06 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (10 Å) | 主引用文献 | Structural Basis for Plexin Activation and Regulation. Neuron, 91, 2016
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5L5M
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![BU of 5l5m by Molmil](/molmil-images/mine/5l5m) | Plexin A4 full extracellular region, domains 1 to 7 modeled, data to 8 angstrom, spacegroup P4(3)2(1)2 | 分子名称: | Plexin-A4 | 著者 | Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y. | 登録日 | 2016-05-28 | 公開日 | 2016-07-06 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (8 Å) | 主引用文献 | Structural Basis for Plexin Activation and Regulation. Neuron, 91, 2016
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5L59
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![BU of 5l59 by Molmil](/molmil-images/mine/5l59) | Plexin A1 full extracellular region, domains 1 to 10, to 6 angstrom, spacegroup P2(1) | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A1, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y. | 登録日 | 2016-05-28 | 公開日 | 2016-07-06 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (6 Å) | 主引用文献 | Structural Basis for Plexin Activation and Regulation. Neuron, 91, 2016
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5L5K
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![BU of 5l5k by Molmil](/molmil-images/mine/5l5k) | Plexin A4 full extracellular region, domains 1 to 10, data to 7.5 angstrom, spacegroup P4(1) | 分子名称: | Plexin-A4 | 著者 | Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y. | 登録日 | 2016-05-28 | 公開日 | 2016-07-06 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (7.501 Å) | 主引用文献 | Structural Basis for Plexin Activation and Regulation. Neuron, 91, 2016
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5L5L
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![BU of 5l5l by Molmil](/molmil-images/mine/5l5l) | Plexin A4 full extracellular region, domains 1 to 8 modeled, data to 8 angstrom, spacegroup P2(1) | 分子名称: | Plexin-A4 | 著者 | Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y. | 登録日 | 2016-05-28 | 公開日 | 2016-07-06 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (8.001 Å) | 主引用文献 | Structural Basis for Plexin Activation and Regulation. Neuron, 91, 2016
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5L56
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![BU of 5l56 by Molmil](/molmil-images/mine/5l56) | Plexin A1 full extracellular region, domains 1 to 10, to 4 angstrom | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A1, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y. | 登録日 | 2016-05-28 | 公開日 | 2016-07-06 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (4 Å) | 主引用文献 | Structural Basis for Plexin Activation and Regulation. Neuron, 91, 2016
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5L5C
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![BU of 5l5c by Molmil](/molmil-images/mine/5l5c) | Plexin A1 full extracellular region, domains 1 to 10, to 6 angstrom, spacegroup P4(3)2(1)2 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A1, ... | 著者 | Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y. | 登録日 | 2016-05-28 | 公開日 | 2016-07-06 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (6 Å) | 主引用文献 | Structural Basis for Plexin Activation and Regulation. Neuron, 91, 2016
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4K3J
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![BU of 4k3j by Molmil](/molmil-images/mine/4k3j) | |
1SHY
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![BU of 1shy by Molmil](/molmil-images/mine/1shy) | |
1OLZ
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![BU of 1olz by Molmil](/molmil-images/mine/1olz) | The ligand-binding face of the semaphorins revealed by the high resolution crystal structure of SEMA4D | 分子名称: | SEMAPHORIN 4D | 著者 | Love, C.A, Harlos, K, Mavaddat, N, Davis, S.J, Stuart, D.I, Jones, E.Y, Esnouf, R.M. | 登録日 | 2003-08-19 | 公開日 | 2003-09-11 | 最終更新日 | 2018-02-28 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | The Ligand-Binding Face of the Semaphorins Revealed by the High-Resolution Crystal Structure of Sema4D Nat.Struct.Biol., 10, 2003
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4O3U
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![BU of 4o3u by Molmil](/molmil-images/mine/4o3u) | |
4O3T
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![BU of 4o3t by Molmil](/molmil-images/mine/4o3t) | Zymogen HGF-beta/MET with Zymogen Activator Peptide ZAP.14 | 分子名称: | Hepatocyte growth factor, Hepatocyte growth factor receptor, PENTAETHYLENE GLYCOL, ... | 著者 | Eigenbrot, C, Landgraf, K.E, Steffek, M. | 登録日 | 2013-12-18 | 公開日 | 2014-06-04 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (2.99 Å) | 主引用文献 | An allosteric switch for pro-HGF/Met signaling using zymogen activator peptides. Nat.Chem.Biol., 10, 2014
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4GZA
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![BU of 4gza by Molmil](/molmil-images/mine/4gza) | Complex of mouse Plexin A2 - Semaphorin 3A - Neuropilin-1 | 分子名称: | CALCIUM ION, Neuropilin-1, Plexin-A2, ... | 著者 | Janssen, B.J.C, Malinauskas, T, Siebold, C, Jones, E.Y. | 登録日 | 2012-09-06 | 公開日 | 2012-10-17 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (7 Å) | 主引用文献 | Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex. Nat.Struct.Mol.Biol., 19, 2012
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4QT8
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![BU of 4qt8 by Molmil](/molmil-images/mine/4qt8) | |
7VG7
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![BU of 7vg7 by Molmil](/molmil-images/mine/7vg7) | Plexin B1 extracellular fragment in complex with lasso-grafted PB1m6A9 peptide | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-B1, TRIETHYLENE GLYCOL, ... | 著者 | Sugano, N.N, Hirata, K, Yamashita, K, Yamamoto, M, Arimori, T, Takagi, J. | 登録日 | 2021-09-14 | 公開日 | 2022-08-17 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | De novo Fc-based receptor dimerizers differentially modulate PlexinB1 function. Structure, 30, 2022
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7VF3
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![BU of 7vf3 by Molmil](/molmil-images/mine/7vf3) | Plexin B1 extracellular fragment in complex with lasso-grafted PB1m7 peptide | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, Plexin-B1, ... | 著者 | Sugano, N.N, Hirata, K, Yamashita, K, Yamamoto, M, Arimori, T, Takagi, J. | 登録日 | 2021-09-10 | 公開日 | 2022-08-17 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.29 Å) | 主引用文献 | De novo Fc-based receptor dimerizers differentially modulate PlexinB1 function. Structure, 30, 2022
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7M0R
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![BU of 7m0r by Molmil](/molmil-images/mine/7m0r) | Cryo-EM structure of the Sema3A/PlexinA4/Neuropilin 1 complex | 分子名称: | CALCIUM ION, Neuropilin-1, Plexin-A4, ... | 著者 | Lu, D, Shang, G, He, X, Bai, X, Zhang, X. | 登録日 | 2021-03-11 | 公開日 | 2021-05-05 | 最終更新日 | 2021-06-09 | 実験手法 | ELECTRON MICROSCOPY (3.7 Å) | 主引用文献 | Architecture of the Sema3A/PlexinA4/Neuropilin tripartite complex. Nat Commun, 12, 2021
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