PDB: 256 件ウェブページステータス検索Chemie searchBIRD

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4XKY	Structure of dihydrodipicolinate synthase from the commensal bacterium Bacteroides thetaiotaomicron at 2.1 A resolution 分子名称: ACETATE ION, Dihydrodipicolinate synthase, SODIUM ION 著者 Mank, N.J, Arnette, A.K, Klapper, V.G, Chruszcz, M. 登録日 2015-01-12 公開日 2015-04-01 最終更新日 2015-04-22 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of dihydrodipicolinate synthase from the commensal bacterium Bacteroides thetaiotaomicron at 2.1 angstrom resolution. Acta Crystallogr.,Sect.F, 71, 2015
6DAQ	PhdJ bound to substrate intermediate 分子名称: PhdJ 著者 Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P. 登録日 2018-05-01 公開日 2019-04-10 最終更新日 2020-01-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily. Biochemistry, 57, 2018
6DAO	NahE WT selenomethionine 分子名称: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase 著者 Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P. 登録日 2018-05-01 公開日 2019-05-08 最終更新日 2020-01-01 実験手法 X-RAY DIFFRACTION (1.939 Å) 主引用文献 Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily. Biochemistry, 57, 2018
5HWN	Crystal structure of keto-deoxy-D-galactarate dehydratase complexed with pyruvate 分子名称: FORMIC ACID, GLYCEROL, PYRUVIC ACID, ... 著者 Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J. 登録日 2016-01-29 公開日 2016-03-23 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.499 Å) 主引用文献 Structure and function of a decarboxylating Agrobacterium tumefaciens keto-deoxy-d-galactarate dehydratase. Biochemistry, 53, 2014
5HWJ	Crystal structure of keto-deoxy-D-galactarate dehydratase 分子名称: FORMIC ACID, GLYCEROL, Probable 5-dehydro-4-deoxyglucarate dehydratase 著者 Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J. 登録日 2016-01-29 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.648 Å) 主引用文献 Structure and function of a decarboxylating Agrobacterium tumefaciens keto-deoxy-d-galactarate dehydratase. Biochemistry, 53, 2014
6XGS	Crystal Structure of Dihydrodipicolinate synthase (DHDPS) from Brucella suis 1330 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, CITRIC ACID, PHOSPHATE ION 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2020-06-18 公開日 2020-07-08 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal Structure of Dihydrodipicolinate synthase (DHDPS) from Brucella suis 1330 to be published
1S5T	Crystal Structure Analysis of a mutant of DIHYDRODIPICOLINATE SYNTHASE--residue thr44 to val44 分子名称: Dihydrodipicolinate synthase 著者 Dobson, R.C.J, Valegard, K, Gerrard, J.A. 登録日 2004-01-21 公開日 2004-04-27 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The Crystal Structure of Three Site-directed Mutants of Escherichia coli Dihydrodipicolinate Synthase: Further Evidence for a Catalytic Triad J.MOL.BIOL., 338, 2004
1S5V	Crystal Structure Analysis of a mutant of DIHYDRODIPICOLINATE SYNTHASE--residue Tyr107 to Phe107 分子名称: Dihydrodipicolinate synthase 著者 Dobson, R.C.J, Valegard, K, Gerrard, J.A. 登録日 2004-01-21 公開日 2004-04-27 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The Crystal Structure of Three Site-directed Mutants of Escherichia coli Dihydrodipicolinate Synthase: Further Evidence for a Catalytic Triad J.MOL.BIOL., 338, 2004
1S5W	Crystal Structure Analysis of a mutant of DIHYDRODIPICOLINATE SYNTHASE--residue Tyr133 to Phe133 分子名称: Dihydrodipicolinate synthase 著者 Dobson, R.C.J, Valegard, K, Gerrard, J.A. 登録日 2004-01-21 公開日 2004-04-27 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 The Crystal Structure of Three Site-directed Mutants of Escherichia coli Dihydrodipicolinate Synthase: Further Evidence for a Catalytic Triad J.MOL.BIOL., 338, 2004
6RB7	Ruminococcus gnavus sialic acid aldolase catalytic lysine mutant 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BICINE, DI(HYDROXYETHYL)ETHER, ... 著者 Owen, C.D, Bell, A, Juge, N, Walsh, M.A. 登録日 2019-04-09 公開日 2019-09-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut. Nat Microbiol, 4, 2019
6RAB	Ruminococcus gnavus sialic acid aldolase Wild Type 分子名称: Putative N-acetylneuraminate lyase 著者 Owen, C.D, Bell, A, Juge, N, Walsh, M.A. 登録日 2019-04-05 公開日 2019-09-25 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut. Nat Microbiol, 4, 2019
6RD1	Ruminococcus gnavus sialic acid aldolase catalytic lysine mutant in complex with sialic acid 分子名称: 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-2-ulosonic acid, Putative N-acetylneuraminate lyase 著者 Owen, C.D, Bell, A, Juge, N, Walsh, M.A. 登録日 2019-04-12 公開日 2019-09-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.892 Å) 主引用文献 Elucidation of a sialic acid metabolism pathway in mucus-foraging Ruminococcus gnavus unravels mechanisms of bacterial adaptation to the gut. Nat Microbiol, 4, 2019
6ARH	Crystal structure of Human NAL at a resolution of 1.6 Angstrom 分子名称: ACETATE ION, N-acetylneuraminate lyase 著者 Pearce, F.G, Bundela, R, Keown, J.R. 登録日 2017-08-22 公開日 2018-08-22 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of Human NAL at a resolution of 1.6 Angstrom To Be Published
5HWM	Crystal structure of keto-deoxy-D-galactarate dehydratase complexed with 2-oxoadipic acid 分子名称: 2-OXOADIPIC ACID, FORMIC ACID, Probable 5-dehydro-4-deoxyglucarate dehydratase 著者 Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J. 登録日 2016-01-29 公開日 2016-03-23 実験手法 X-RAY DIFFRACTION (2.097 Å) 主引用文献 Structure and function of a decarboxylating Agrobacterium tumefaciens keto-deoxy-d-galactarate dehydratase. Biochemistry, 53, 2014
5A8G	Crystal structure of the wild-type Staphylococcus aureus N- acetylneurminic acid lyase in complex with fluoropyruvate 分子名称: N-ACETYLNEURAMINATE LYASE 著者 Stockwell, J, Daniels, A.D, Windle, C.L, Harman, T, Woodhall, T, Trinh, C.H, Lebel, T, Pearson, A.R, Mulholland, K, Berry, A, Nelson, A. 登録日 2015-07-15 公開日 2015-11-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Evaluation of Fluoropyruvate as Nucleophile in Reactions Catalysed by N-Acetyl Neuraminic Acid Lyase Variants: Scope, Limitations and Stereoselectivity. Org.Biomol.Chem., 14, 2016
6DAN	PhdJ WT 2 Angstroms resolution 分子名称: CHLORIDE ION, PhdJ 著者 Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P. 登録日 2018-05-01 公開日 2019-04-10 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.047 Å) 主引用文献 Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily. Biochemistry, 57, 2018
5ZJM	Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum 分子名称: 1,2-ETHANEDIOL, N-acetylneuraminate lyase 著者 Kumar, J.P, Rao, H, Nayak, V, Subramanian, R. 登録日 2018-03-21 公開日 2019-01-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.323 Å) 主引用文献 Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum Acta Crystallogr F Struct Biol Commun, 74, 2018
5ZKA	Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum complexed with Pyruvate 分子名称: 1,2-ETHANEDIOL, N-acetylneuraminate lyase, TRIETHYLENE GLYCOL 著者 Kumar, J.P, Rao, H, Nayak, V, Ramaswamy, S. 登録日 2018-03-23 公開日 2018-12-05 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum Acta Crystallogr F Struct Biol Commun, 74, 2018
7C0D	Crystal structure of Azospirillum brasilense L-2-keto-3-deoxyarabonate dehydratase (Hydroxypyruvate-bound form) 分子名称: L-2-keto-3-deoxyarabonate dehydratase 著者 Watanabe, Y, Watanabe, S. 登録日 2020-05-01 公開日 2020-08-05 最終更新日 2020-09-02 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Biochemical and Structural Characterization of l-2-Keto-3-deoxyarabinonate Dehydratase: A Unique Catalytic Mechanism in the Class I Aldolase Protein Superfamily. Biochemistry, 59, 2020
5AFD	Native structure of N-acetylneuramininate lyase (sialic acid aldolase) from Aliivibrio salmonicida 分子名称: 1,2-ETHANEDIOL, GLYCEROL, N-ACETYLNEURAMINATE LYASE 著者 Gurung, M.K, Altermark, B, Rader, I.L.U, Helland, R, Smalas, A.O. 登録日 2015-01-21 公開日 2016-03-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Features and structure of a cold active N-acetylneuraminate lyase. Plos One, 14, 2019
7C0E	Crystal structure of Azospirillum brasilense L-2-keto-3-deoxyarabonate dehydratase (2-oxobutyrate-bound form) 分子名称: L-2-keto-3-deoxyarabonate dehydratase 著者 Watanabe, Y, Ono, A, Watanabe, S. 登録日 2020-05-01 公開日 2020-08-05 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.204 Å) 主引用文献 Biochemical and Structural Characterization of l-2-Keto-3-deoxyarabinonate Dehydratase: A Unique Catalytic Mechanism in the Class I Aldolase Protein Superfamily. Biochemistry, 59, 2020
4UR7	Crystal structure of keto-deoxy-D-galactarate dehydratase complexed with pyruvate 分子名称: FORMIC ACID, GLYCEROL, KETO-DEOXY-D-GALACTARATE DEHYDRATASE 著者 Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J. 登録日 2014-06-26 公開日 2014-12-17 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.499 Å) 主引用文献 Structure and Function of a Decarboxylating Agrobacterium Tumefaciens Keto-Deoxy-D-Galactarate Dehydratase. Biochemistry, 53, 2014
4UUI	A case study for twinned data analysis: multiple crystal forms of the enzyme N-acetyl-neuraminic lyase 分子名称: N-ACETYLNEURAMINATE LYASE, PENTAETHYLENE GLYCOL, PYRUVIC ACID, ... 著者 Campeotto, I, Phillips, S.E.V, Pearson, A.R. 登録日 2014-07-29 公開日 2015-08-12 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 A Case Study for Twinned Data Analysis: Multiple Crystal Forms of the Enzyme N-Acetyl-Neuraminic Lyase To be Published
4WOQ	Crystal Structures of CdNal from Clostridium difficile in complex with ketobutyric 分子名称: 2-KETOBUTYRIC ACID, N-acetylneuraminate lyase 著者 Liu, W.D, Guo, R.T, Cui, Y.F, Chen, X, Wu, Q.Q, Zhu, D.M. 登録日 2014-10-16 公開日 2015-10-21 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal Structures of CdNal from Clostridium difficile in complex with ketobutyric to be published
4WOZ	Crystal Structures of CdNal from Clostridium difficile in complex with mannosamine 分子名称: 2-(ACETYLAMINO)-2-DEOXY-D-MANNOSE, N-acetylneuraminate lyase 著者 Liu, W.D, Guo, R.T, Cui, Y.F, Chen, X, Wu, Q.Q, Zhu, D.M. 登録日 2014-10-17 公開日 2015-10-21 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Crystal Structures of CdNal from Clostridium difficile in complex with mannosamine to be published

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